RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
PPP3CA-202ENST00000394853 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
PPP3CA-202ENST00000394853 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.96
PPP3CA-202ENST00000394853 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
PPP3CA-202ENST00000394853 AQRO60306 1485 aaKnown RBP eCLIP21.03■□□□□ 0.96
PPP3CA-202ENST00000394853 ITGAEP38570 1179 aa21.03■□□□□ 0.96
PPP3CA-202ENST00000394853 FHOD3Q2V2M9 1422 aa21.01■□□□□ 0.95
PPP3CA-202ENST00000394853 MRC2Q9UBG0 1479 aa20.99■□□□□ 0.95
PPP3CA-202ENST00000394853 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
PPP3CA-202ENST00000394853 CUL7Q14999 1698 aa20.93■□□□□ 0.94
PPP3CA-202ENST00000394853 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
PPP3CA-202ENST00000394853 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
PPP3CA-202ENST00000394853 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.94
PPP3CA-202ENST00000394853 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
PPP3CA-202ENST00000394853 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.92
PPP3CA-202ENST00000394853 PCF11O94913 1555 aaKnown RBP20.81■□□□□ 0.92
PPP3CA-202ENST00000394853 CCNB3Q8WWL7 1395 aa20.8■□□□□ 0.92
PPP3CA-202ENST00000394853 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
PPP3CA-202ENST00000394853 TIAM1Q13009 1591 aa20.79■□□□□ 0.92
PPP3CA-202ENST00000394853 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
PPP3CA-202ENST00000394853 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
PPP3CA-202ENST00000394853 LRRC9Q6ZRR7 1453 aa20.77■□□□□ 0.92
PPP3CA-202ENST00000394853 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
PPP3CA-202ENST00000394853 WDR62O43379 1518 aa20.75■□□□□ 0.91
PPP3CA-202ENST00000394853 PHLDB1Q86UU1 1377 aa20.75■□□□□ 0.91
PPP3CA-202ENST00000394853 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
PPP3CA-202ENST00000394853 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
PPP3CA-202ENST00000394853 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
PPP3CA-202ENST00000394853 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
PPP3CA-202ENST00000394853 JPH4Q96JJ6 628 aa20.73■□□□□ 0.91
PPP3CA-202ENST00000394853 FMN1Q68DA7 1419 aa20.73■□□□□ 0.91
PPP3CA-202ENST00000394853 CASKIN1Q8WXD9 1431 aa20.71■□□□□ 0.91
PPP3CA-202ENST00000394853 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
PPP3CA-202ENST00000394853 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
PPP3CA-202ENST00000394853 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
PPP3CA-202ENST00000394853 FYCO1Q9BQS8 1478 aa20.68■□□□□ 0.9
PPP3CA-202ENST00000394853 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
PPP3CA-202ENST00000394853 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
PPP3CA-202ENST00000394853 MAP3K1Q13233 1512 aa20.65■□□□□ 0.9
PPP3CA-202ENST00000394853 KCNH8Q96L42 1107 aa20.64■□□□□ 0.89
PPP3CA-202ENST00000394853 ZNF777Q9ULD5 760 aaPredicted RBP20.63■□□□□ 0.89
PPP3CA-202ENST00000394853 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
PPP3CA-202ENST00000394853 SAMD9Q5K651 1589 aa20.61■□□□□ 0.89
PPP3CA-202ENST00000394853 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
PPP3CA-202ENST00000394853 THOC2Q8NI27 1593 aaKnown RBP20.61■□□□□ 0.89
PPP3CA-202ENST00000394853 DHX57Q6P158 1386 aaKnown RBP20.59■□□□□ 0.89
PPP3CA-202ENST00000394853 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
PPP3CA-202ENST00000394853 RAB3GAP2Q9H2M9 1393 aa20.55■□□□□ 0.88
PPP3CA-202ENST00000394853 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
PPP3CA-202ENST00000394853 PLEKHD1A6NEE1 506 aa20.52■□□□□ 0.88
PPP3CA-202ENST00000394853 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
PPP3CA-202ENST00000394853 CYB5RLQ6IPT4 315 aa20.51■□□□□ 0.87
PPP3CA-202ENST00000394853 CARMIL2Q6F5E8 1435 aa20.5■□□□□ 0.87
PPP3CA-202ENST00000394853 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
PPP3CA-202ENST00000394853 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
PPP3CA-202ENST00000394853 LRRIQ1Q96JM4 1722 aa20.47■□□□□ 0.87
PPP3CA-202ENST00000394853 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
PPP3CA-202ENST00000394853 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
PPP3CA-202ENST00000394853 FGD6Q6ZV73 1430 aa20.46■□□□□ 0.87
PPP3CA-202ENST00000394853 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
PPP3CA-202ENST00000394853 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
PPP3CA-202ENST00000394853 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
PPP3CA-202ENST00000394853 CHIC2Q9UKJ5 165 aa20.45■□□□□ 0.86
PPP3CA-202ENST00000394853 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
PPP3CA-202ENST00000394853 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
PPP3CA-202ENST00000394853 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
PPP3CA-202ENST00000394853 MAGI3Q5TCQ9 1506 aa20.42■□□□□ 0.86
PPP3CA-202ENST00000394853 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
PPP3CA-202ENST00000394853 DAXXQ9UER7 740 aaPredicted RBP20.4■□□□□ 0.86
PPP3CA-202ENST00000394853 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
PPP3CA-202ENST00000394853 BCL11AQ9H165 835 aa20.39■□□□□ 0.86
PPP3CA-202ENST00000394853 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
PPP3CA-202ENST00000394853 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
PPP3CA-202ENST00000394853 HECW1Q76N89 1606 aa20.37■□□□□ 0.85
PPP3CA-202ENST00000394853 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
PPP3CA-202ENST00000394853 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
PPP3CA-202ENST00000394853 KIAA0556O60303 1618 aa20.37■□□□□ 0.85
PPP3CA-202ENST00000394853 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
PPP3CA-202ENST00000394853 PTPRGP23470 1445 aa20.36■□□□□ 0.85
PPP3CA-202ENST00000394853 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
PPP3CA-202ENST00000394853 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
PPP3CA-202ENST00000394853 SUPT6HQ7KZ85 1726 aaKnown RBP20.33■□□□□ 0.85
PPP3CA-202ENST00000394853 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.85
PPP3CA-202ENST00000394853 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
PPP3CA-202ENST00000394853 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
PPP3CA-202ENST00000394853 NUP153P49790 1475 aaKnown RBP20.3■□□□□ 0.84
PPP3CA-202ENST00000394853 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
PPP3CA-202ENST00000394853 NUP160Q12769 1436 aa20.29■□□□□ 0.84
PPP3CA-202ENST00000394853 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
PPP3CA-202ENST00000394853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.28■□□□□ 0.84
PPP3CA-202ENST00000394853 CFDP1Q9UEE9 299 aaPredicted RBP20.27■□□□□ 0.83
PPP3CA-202ENST00000394853 MAPKBP1O60336 1514 aa20.25■□□□□ 0.83
PPP3CA-202ENST00000394853 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
PPP3CA-202ENST00000394853 RAPGEF6Q8TEU7 1601 aa20.23■□□□□ 0.83
PPP3CA-202ENST00000394853 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
PPP3CA-202ENST00000394853 TSPY4P0CV99 314 aa20.19■□□□□ 0.82
PPP3CA-202ENST00000394853 TSPY10P0CW01 314 aa20.19■□□□□ 0.82
PPP3CA-202ENST00000394853 NAIPQ13075 1403 aa20.18■□□□□ 0.82
PPP3CA-202ENST00000394853 HFM1A2PYH4 1435 aa20.17■□□□□ 0.82
PPP3CA-202ENST00000394853 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms