RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
NUP58-204ENST00000394327 PEG3Q9GZU2 1588 aa11.32□□□□□ -0.6
NUP58-204ENST00000394327 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
NUP58-204ENST00000394327 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
NUP58-204ENST00000394327 EVX2Q03828 476 aa11.31□□□□□ -0.6
NUP58-204ENST00000394327 SMARCA2P51531 1590 aa11.31□□□□□ -0.6
NUP58-204ENST00000394327 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
NUP58-204ENST00000394327 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
NUP58-204ENST00000394327 RSF1Q96T23 1441 aaPredicted RBP11.28□□□□□ -0.6
NUP58-204ENST00000394327 WIZO95785 1651 aa11.27□□□□□ -0.61
NUP58-204ENST00000394327 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
NUP58-204ENST00000394327 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
NUP58-204ENST00000394327 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
NUP58-204ENST00000394327 NCAPD3P42695 1498 aa11.21□□□□□ -0.61
NUP58-204ENST00000394327 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
NUP58-204ENST00000394327 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
NUP58-204ENST00000394327 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
NUP58-204ENST00000394327 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
NUP58-204ENST00000394327 NUBP1P53384 320 aa11.18□□□□□ -0.62
NUP58-204ENST00000394327 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
NUP58-204ENST00000394327 PKD2Q13563 968 aa11.15□□□□□ -0.62
NUP58-204ENST00000394327 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
NUP58-204ENST00000394327 GABBR2O75899 941 aa11.11□□□□□ -0.63
NUP58-204ENST00000394327 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
NUP58-204ENST00000394327 SUPT5HO00267 1087 aaKnown RBP11.1□□□□□ -0.63
NUP58-204ENST00000394327 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
NUP58-204ENST00000394327 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
NUP58-204ENST00000394327 PRDM2Q13029 1718 aa11□□□□□ -0.65
NUP58-204ENST00000394327 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
NUP58-204ENST00000394327 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
NUP58-204ENST00000394327 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
NUP58-204ENST00000394327 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
NUP58-204ENST00000394327 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
NUP58-204ENST00000394327 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
NUP58-204ENST00000394327 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
NUP58-204ENST00000394327 POTEMA6NI47 508 aa10.94□□□□□ -0.66
NUP58-204ENST00000394327 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
NUP58-204ENST00000394327 RGL2O15211 777 aa10.93□□□□□ -0.66
NUP58-204ENST00000394327 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
NUP58-204ENST00000394327 GSE1Q14687 1217 aa10.92□□□□□ -0.66
NUP58-204ENST00000394327 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
NUP58-204ENST00000394327 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
NUP58-204ENST00000394327 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
NUP58-204ENST00000394327 CFTRP13569 1480 aa10.89□□□□□ -0.67
NUP58-204ENST00000394327 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
NUP58-204ENST00000394327 PYGBP11216 843 aa10.87□□□□□ -0.67
NUP58-204ENST00000394327 POTEGQ6S5H5 508 aa10.86□□□□□ -0.67
NUP58-204ENST00000394327 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
NUP58-204ENST00000394327 NESP48681 1621 aa10.84□□□□□ -0.67
NUP58-204ENST00000394327 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
NUP58-204ENST00000394327 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
NUP58-204ENST00000394327 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
NUP58-204ENST00000394327 PHF12Q96QT6 1004 aa10.81□□□□□ -0.68
NUP58-204ENST00000394327 PDS5BQ9NTI5 1447 aa10.81□□□□□ -0.68
NUP58-204ENST00000394327 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
NUP58-204ENST00000394327 KIF12Q96FN5 646 aa10.78□□□□□ -0.68
NUP58-204ENST00000394327 FANCD2Q9BXW9 1451 aa10.77□□□□□ -0.68
NUP58-204ENST00000394327 POTEIP0CG38 1075 aa10.77□□□□□ -0.68
NUP58-204ENST00000394327 MAP3K13O43283 966 aa10.76□□□□□ -0.69
NUP58-204ENST00000394327 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
NUP58-204ENST00000394327 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
NUP58-204ENST00000394327 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
NUP58-204ENST00000394327 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
NUP58-204ENST00000394327 PCDHB13Q9Y5F0 798 aa10.74□□□□□ -0.69
NUP58-204ENST00000394327 RIOK3O14730 519 aaKnown RBP10.72□□□□□ -0.69
NUP58-204ENST00000394327 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
NUP58-204ENST00000394327 CLCN6P51797 869 aa10.72□□□□□ -0.69
NUP58-204ENST00000394327 IFNL1Q8IU54 200 aa10.71□□□□□ -0.69
NUP58-204ENST00000394327 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.7
NUP58-204ENST00000394327 ABCC8Q09428 1581 aa10.7□□□□□ -0.7
NUP58-204ENST00000394327 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
NUP58-204ENST00000394327 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
NUP58-204ENST00000394327 DNMBPQ6XZF7 1577 aa10.68□□□□□ -0.7
NUP58-204ENST00000394327 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
NUP58-204ENST00000394327 WDR62O43379 1518 aa10.67□□□□□ -0.7
NUP58-204ENST00000394327 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
NUP58-204ENST00000394327 DCBLD2Q96PD2 775 aa10.67□□□□□ -0.7
NUP58-204ENST00000394327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
NUP58-204ENST00000394327 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
NUP58-204ENST00000394327 TOP2BQ02880 1626 aa10.65□□□□□ -0.7
NUP58-204ENST00000394327 WRNQ14191 1432 aaPredicted RBP eCLIP10.65□□□□□ -0.7
NUP58-204ENST00000394327 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
NUP58-204ENST00000394327 URB2Q14146 1524 aaKnown RBP10.64□□□□□ -0.71
NUP58-204ENST00000394327 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
NUP58-204ENST00000394327 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
NUP58-204ENST00000394327 CUX1P39880 1505 aa10.64□□□□□ -0.71
NUP58-204ENST00000394327 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
NUP58-204ENST00000394327 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
NUP58-204ENST00000394327 VGFO15240 615 aaPredicted RBP10.63□□□□□ -0.71
NUP58-204ENST00000394327 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
NUP58-204ENST00000394327 ZNF467Q7Z7K2 595 aaPredicted RBP10.61□□□□□ -0.71
NUP58-204ENST00000394327 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
NUP58-204ENST00000394327 PSEN1P49768 467 aa10.58□□□□□ -0.72
NUP58-204ENST00000394327 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
NUP58-204ENST00000394327 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
NUP58-204ENST00000394327 CUX2O14529 1486 aa10.57□□□□□ -0.72
NUP58-204ENST00000394327 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
NUP58-204ENST00000394327 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
NUP58-204ENST00000394327 WDR97A6NE52 1622 aa10.56□□□□□ -0.72
NUP58-204ENST00000394327 STK25O00506 426 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms