RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 WDR62O43379 1518 aa31.95■■■□□ 2.71
RAP1B-204ENST00000393436 HNRNPUL2Q1KMD3 747 aaKnown RBP31.95■■■□□ 2.7
RAP1B-204ENST00000393436 P3H3Q8IVL6 736 aa31.92■■■□□ 2.7
RAP1B-204ENST00000393436 TIAM1Q13009 1591 aa31.9■■■□□ 2.7
RAP1B-204ENST00000393436 AQRO60306 1485 aaKnown RBP eCLIP31.89■■■□□ 2.71e-6■■■■□ 26.1
RAP1B-204ENST00000393436 PCF11O94913 1555 aaKnown RBP31.89■■■□□ 2.7
RAP1B-204ENST00000393436 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
RAP1B-204ENST00000393436 FHOD3Q2V2M9 1422 aa31.89■■■□□ 2.7
RAP1B-204ENST00000393436 MAP3K1Q13233 1512 aa31.88■■■□□ 2.69
RAP1B-204ENST00000393436 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
RAP1B-204ENST00000393436 ERCC6Q03468 1493 aa31.82■■■□□ 2.68
RAP1B-204ENST00000393436 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
RAP1B-204ENST00000393436 CFAP43Q8NDM7 1665 aa31.8■■■□□ 2.68
RAP1B-204ENST00000393436 ZNF608Q9ULD9 1512 aaPredicted RBP31.78■■■□□ 2.68
RAP1B-204ENST00000393436 RRBP1Q9P2E9 1410 aaKnown RBP31.78■■■□□ 2.68
RAP1B-204ENST00000393436 SAMD9Q5K651 1589 aa31.78■■■□□ 2.68
RAP1B-204ENST00000393436 GRIN2BQ13224 1484 aa31.77■■■□□ 2.68
RAP1B-204ENST00000393436 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.67
RAP1B-204ENST00000393436 LRRC9Q6ZRR7 1453 aa31.74■■■□□ 2.67
RAP1B-204ENST00000393436 FYCO1Q9BQS8 1478 aa31.74■■■□□ 2.67
RAP1B-204ENST00000393436 CASKIN1Q8WXD9 1431 aa31.71■■■□□ 2.67
RAP1B-204ENST00000393436 FMN1Q68DA7 1419 aa31.67■■■□□ 2.66
RAP1B-204ENST00000393436 ATP1B4Q9UN42 357 aaPredicted RBP31.66■■■□□ 2.66
RAP1B-204ENST00000393436 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
RAP1B-204ENST00000393436 CCNB3Q8WWL7 1395 aa31.64■■■□□ 2.66
RAP1B-204ENST00000393436 SNAPC4Q5SXM2 1469 aa31.64■■■□□ 2.66
RAP1B-204ENST00000393436 IQGAP2Q13576 1575 aa31.6■■■□□ 2.65
RAP1B-204ENST00000393436 LRRIQ1Q96JM4 1722 aa31.55■■■□□ 2.64
RAP1B-204ENST00000393436 PHLDB1Q86UU1 1377 aa31.54■■■□□ 2.64
RAP1B-204ENST00000393436 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
RAP1B-204ENST00000393436 ITGAEP38570 1179 aa31.41■■■□□ 2.62
RAP1B-204ENST00000393436 UGGT2Q9NYU1 1516 aa31.41■■■□□ 2.62
RAP1B-204ENST00000393436 MAGI1Q96QZ7 1491 aaPredicted RBP31.39■■■□□ 2.62
RAP1B-204ENST00000393436 KIAA0586Q9BVV6 1533 aa31.38■■■□□ 2.61
RAP1B-204ENST00000393436 DHX57Q6P158 1386 aaKnown RBP31.35■■■□□ 2.61
RAP1B-204ENST00000393436 MTUS2Q5JR59 1369 aa31.33■■■□□ 2.61
RAP1B-204ENST00000393436 HECW1Q76N89 1606 aa31.32■■■□□ 2.6
RAP1B-204ENST00000393436 SYNJ2O15056 1496 aa31.31■■■□□ 2.6
RAP1B-204ENST00000393436 FAM50AQ14320 339 aaKnown RBP31.31■■■□□ 2.6
RAP1B-204ENST00000393436 KIAA0556O60303 1618 aa31.29■■■□□ 2.6
RAP1B-204ENST00000393436 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
RAP1B-204ENST00000393436 DISP1Q96F81 1524 aa31.27■■■□□ 2.6
RAP1B-204ENST00000393436 CCDC18Q5T9S5 1454 aa31.27■■■□□ 2.6
RAP1B-204ENST00000393436 EHBP1L1Q8N3D4 1523 aa31.26■■■□□ 2.59
RAP1B-204ENST00000393436 CHMP7Q8WUX9 453 aaPredicted RBP31.24■■■□□ 2.59
RAP1B-204ENST00000393436 SUPT6HQ7KZ85 1726 aaKnown RBP31.24■■■□□ 2.59
RAP1B-204ENST00000393436 MAGI3Q5TCQ9 1506 aa31.24■■■□□ 2.59
RAP1B-204ENST00000393436 FGD6Q6ZV73 1430 aa31.22■■■□□ 2.59
RAP1B-204ENST00000393436 NCOA2Q15596 1464 aa31.22■■■□□ 2.59
RAP1B-204ENST00000393436 CLSPNQ9HAW4 1339 aa31.21■■■□□ 2.59
RAP1B-204ENST00000393436 EPRSP07814 1512 aaKnown RBP31.2■■■□□ 2.59
RAP1B-204ENST00000393436 RAB3GAP2Q9H2M9 1393 aa31.2■■■□□ 2.59
RAP1B-204ENST00000393436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.2■■■□□ 2.596e-8■□□□□ 11.2
RAP1B-204ENST00000393436 FBLN2P98095 1184 aa31.17■■■□□ 2.58
RAP1B-204ENST00000393436 CDK13Q14004 1512 aaKnown RBP31.16■■■□□ 2.58
RAP1B-204ENST00000393436 SETD5Q9C0A6 1442 aa31.15■■■□□ 2.58
RAP1B-204ENST00000393436 ARHGEF11O15085 1522 aa31.13■■■□□ 2.57
RAP1B-204ENST00000393436 NUP160Q12769 1436 aa31.13■■■□□ 2.57
RAP1B-204ENST00000393436 MYOM3Q5VTT5 1437 aa31.13■■■□□ 2.57
RAP1B-204ENST00000393436 RAPGEF6Q8TEU7 1601 aa31.07■■■□□ 2.56
RAP1B-204ENST00000393436 ARID3CA6NKF2 412 aa31.05■■■□□ 2.56
RAP1B-204ENST00000393436 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
RAP1B-204ENST00000393436 PTPN23Q9H3S7 1636 aa31.02■■■□□ 2.56
RAP1B-204ENST00000393436 ZNF316A6NFI3 1004 aaPredicted RBP31.01■■■□□ 2.55
RAP1B-204ENST00000393436 MAPKBP1O60336 1514 aa30.98■■■□□ 2.55
RAP1B-204ENST00000393436 PTPRKQ15262 1439 aa30.97■■■□□ 2.55
RAP1B-204ENST00000393436 JPH4Q96JJ6 628 aa30.97■■■□□ 2.55
RAP1B-204ENST00000393436 DIEXFQ68CQ4 756 aaKnown RBP30.94■■■□□ 2.54
RAP1B-204ENST00000393436 CARMIL2Q6F5E8 1435 aa30.94■■■□□ 2.54
RAP1B-204ENST00000393436 TCOF1Q13428 1488 aaKnown RBP30.91■■■□□ 2.54
RAP1B-204ENST00000393436 PLB1Q6P1J6 1458 aa30.9■■■□□ 2.54
RAP1B-204ENST00000393436 CHD1O14646 1710 aa30.88■■■□□ 2.53
RAP1B-204ENST00000393436 HFM1A2PYH4 1435 aa30.85■■■□□ 2.53
RAP1B-204ENST00000393436 MIA2Q96PC5 1412 aa30.83■■■□□ 2.53
RAP1B-204ENST00000393436 NAIPQ13075 1403 aa30.78■■■□□ 2.52
RAP1B-204ENST00000393436 CDK11AQ9UQ88 783 aaPredicted RBP30.77■■■□□ 2.52
RAP1B-204ENST00000393436 ABCA8O94911 1581 aa30.76■■■□□ 2.51
RAP1B-204ENST00000393436 PRG4Q92954 1404 aaPredicted RBP30.75■■■□□ 2.51
RAP1B-204ENST00000393436 TROQ12816 1431 aaPredicted RBP30.74■■■□□ 2.51
RAP1B-204ENST00000393436 GCC2Q8IWJ2 1684 aa30.7■■■□□ 2.51
RAP1B-204ENST00000393436 ADCY10Q96PN6 1610 aa30.69■■■□□ 2.5
RAP1B-204ENST00000393436 KIF14Q15058 1648 aa30.67■■■□□ 2.5
RAP1B-204ENST00000393436 CHIC2Q9UKJ5 165 aa30.67■■■□□ 2.5
RAP1B-204ENST00000393436 UACAQ9BZF9 1416 aa30.66■■■□□ 2.5
RAP1B-204ENST00000393436 SIN3AQ96ST3 1273 aa30.66■■■□□ 2.5
RAP1B-204ENST00000393436 RRP7BPQ9NSQ0 103 aa30.64■■■□□ 2.5
RAP1B-204ENST00000393436 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
RAP1B-204ENST00000393436 ITSN2Q9NZM3 1697 aa30.63■■■□□ 2.49
RAP1B-204ENST00000393436 AKNAQ7Z591 1439 aa30.62■■■□□ 2.49
RAP1B-204ENST00000393436 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
RAP1B-204ENST00000393436 ATP10BO94823 1461 aa30.6■■■□□ 2.49
RAP1B-204ENST00000393436 NEUROD1Q13562 356 aa30.6■■■□□ 2.49
RAP1B-204ENST00000393436 DAPK1P53355 1430 aa30.6■■■□□ 2.49
RAP1B-204ENST00000393436 ZNF644Q9H582 1327 aaPredicted RBP30.59■■■□□ 2.49
RAP1B-204ENST00000393436 PTPRGP23470 1445 aa30.58■■■□□ 2.49
RAP1B-204ENST00000393436 KDM6BO15054 1643 aa30.58■■■□□ 2.49
RAP1B-204ENST00000393436 GPATCH8Q9UKJ3 1502 aaKnown RBP30.56■■■□□ 2.48
RAP1B-204ENST00000393436 ABCC5O15440 1437 aa30.55■■■□□ 2.48
RAP1B-204ENST00000393436 CAMSAP2Q08AD1 1489 aa30.53■■■□□ 2.48
RAP1B-204ENST00000393436 PLEKHD1A6NEE1 506 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms