RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 KIAA0586Q9BVV6 1533 aa31.31■■■□□ 2.6
NME1-203ENST00000393196 JPH4Q96JJ6 628 aa31.26■■■□□ 2.59
NME1-203ENST00000393196 SHROOM2Q13796 1616 aa31.25■■■□□ 2.59
NME1-203ENST00000393196 CSRNP3Q8WYN3 585 aa31.24■■■□□ 2.59
NME1-203ENST00000393196 ARAP1Q96P48 1450 aa31.24■■■□□ 2.59
NME1-203ENST00000393196 PRXQ9BXM0 1461 aa31.23■■■□□ 2.59
NME1-203ENST00000393196 CYB5RLQ6IPT4 315 aa31.22■■■□□ 2.59
NME1-203ENST00000393196 PRG4Q92954 1404 aaPredicted RBP31.17■■■□□ 2.58
NME1-203ENST00000393196 IQGAP2Q13576 1575 aa31.09■■■□□ 2.57
NME1-203ENST00000393196 CARMIL2Q6F5E8 1435 aa31.05■■■□□ 2.56
NME1-203ENST00000393196 ERCC6L2Q5T890 1561 aa31.05■■■□□ 2.56
NME1-203ENST00000393196 FAM9AQ8IZU1 332 aaPredicted RBP31.02■■■□□ 2.56
NME1-203ENST00000393196 UGGT2Q9NYU1 1516 aa30.95■■■□□ 2.55
NME1-203ENST00000393196 CTTNBP2Q8WZ74 1663 aa30.91■■■□□ 2.54
NME1-203ENST00000393196 KIF21BO75037 1637 aa30.91■■■□□ 2.54
NME1-203ENST00000393196 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
NME1-203ENST00000393196 GOLGA3Q08378 1498 aa30.88■■■□□ 2.53
NME1-203ENST00000393196 PTPRGP23470 1445 aa30.85■■■□□ 2.53
NME1-203ENST00000393196 DISP1Q96F81 1524 aa30.83■■■□□ 2.53
NME1-203ENST00000393196 KIAA0556O60303 1618 aa30.76■■■□□ 2.52
NME1-203ENST00000393196 NPM1P06748 294 aaKnown RBP eCLIP30.72■■■□□ 2.51
NME1-203ENST00000393196 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
NME1-203ENST00000393196 TTBK1Q5TCY1 1321 aaPredicted RBP30.66■■■□□ 2.5
NME1-203ENST00000393196 UACAQ9BZF9 1416 aa30.64■■■□□ 2.5
NME1-203ENST00000393196 UHRF1BP1LA0JNW5 1464 aa30.63■■■□□ 2.49
NME1-203ENST00000393196 ADCY10Q96PN6 1610 aa30.61■■■□□ 2.49
NME1-203ENST00000393196 TRHP20396 242 aaPredicted RBP30.6■■■□□ 2.49
NME1-203ENST00000393196 SAMD9Q5K651 1589 aa30.58■■■□□ 2.49
NME1-203ENST00000393196 EFCAB5A4FU69 1503 aa30.57■■■□□ 2.48
NME1-203ENST00000393196 ABCC2Q92887 1545 aa30.56■■■□□ 2.48
NME1-203ENST00000393196 EHMT2Q96KQ7 1210 aa30.53■■■□□ 2.48
NME1-203ENST00000393196 MAPKBP1O60336 1514 aa30.52■■■□□ 2.48
NME1-203ENST00000393196 P3H3Q8IVL6 736 aa30.49■■■□□ 2.47
NME1-203ENST00000393196 RANGAP1P46060 587 aaPredicted RBP30.48■■■□□ 2.47
NME1-203ENST00000393196 PLB1Q6P1J6 1458 aa30.44■■■□□ 2.46
NME1-203ENST00000393196 KDM5BQ9UGL1 1544 aa30.44■■■□□ 2.46
NME1-203ENST00000393196 ABCA8O94911 1581 aa30.44■■■□□ 2.46
NME1-203ENST00000393196 FHOD3Q2V2M9 1422 aa30.39■■■□□ 2.46
NME1-203ENST00000393196 ABCC10Q5T3U5 1492 aa30.36■■■□□ 2.45
NME1-203ENST00000393196 ASXL2Q76L83 1435 aa30.33■■■□□ 2.45
NME1-203ENST00000393196 ARHGAP35Q9NRY4 1499 aa30.31■■■□□ 2.44
NME1-203ENST00000393196 FMN1Q68DA7 1419 aa30.31■■■□□ 2.44
NME1-203ENST00000393196 FAM69CQ0P6D2 419 aa30.29■■■□□ 2.44
NME1-203ENST00000393196 ZCCHC11Q5TAX3 1644 aaKnown RBP30.28■■■□□ 2.44
NME1-203ENST00000393196 RAPGEF6Q8TEU7 1601 aa30.27■■■□□ 2.44
NME1-203ENST00000393196 DIP2BQ9P265 1576 aa30.24■■■□□ 2.43
NME1-203ENST00000393196 CLIP1P30622 1438 aa30.22■■■□□ 2.43
NME1-203ENST00000393196 WDR7Q9Y4E6 1490 aa30.21■■■□□ 2.43
NME1-203ENST00000393196 ATP10BO94823 1461 aa30.19■■■□□ 2.42
NME1-203ENST00000393196 NUP153P49790 1475 aaKnown RBP30.19■■■□□ 2.42
NME1-203ENST00000393196 GLI2P10070 1586 aa30.16■■■□□ 2.42
NME1-203ENST00000393196 KIF13AQ9H1H9 1805 aa30.15■■■□□ 2.42
NME1-203ENST00000393196 EPRSP07814 1512 aaKnown RBP30.14■■■□□ 2.42
NME1-203ENST00000393196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.12■■■□□ 2.41
NME1-203ENST00000393196 HNRNPUL2Q1KMD3 747 aaKnown RBP30.12■■■□□ 2.41
NME1-203ENST00000393196 ARID3CA6NKF2 412 aa30.11■■■□□ 2.41
NME1-203ENST00000393196 CEP162Q5TB80 1403 aa30.08■■■□□ 2.41
NME1-203ENST00000393196 HECW1Q76N89 1606 aa30.07■■■□□ 2.4
NME1-203ENST00000393196 PLEKHD1A6NEE1 506 aa30.04■■■□□ 2.4
NME1-203ENST00000393196 LOC105371045A0A1W2PR82 267 aa30.03■■■□□ 2.4
NME1-203ENST00000393196 ATP1B4Q9UN42 357 aaPredicted RBP30.03■■■□□ 2.4
NME1-203ENST00000393196 CASKIN1Q8WXD9 1431 aa30.03■■■□□ 2.4
NME1-203ENST00000393196 KCNH8Q96L42 1107 aa30.02■■■□□ 2.4
NME1-203ENST00000393196 CDK11AQ9UQ88 783 aaPredicted RBP30.02■■■□□ 2.4
NME1-203ENST00000393196 FYCO1Q9BQS8 1478 aa29.97■■■□□ 2.39
NME1-203ENST00000393196 TEX14Q8IWB6 1497 aa29.96■■■□□ 2.39
NME1-203ENST00000393196 CCDC18Q5T9S5 1454 aa29.94■■■□□ 2.38
NME1-203ENST00000393196 MAP3K4Q9Y6R4 1608 aa29.94■■■□□ 2.38
NME1-203ENST00000393196 CD109Q6YHK3 1445 aa29.93■■■□□ 2.38
NME1-203ENST00000393196 CDK13Q14004 1512 aaKnown RBP29.92■■■□□ 2.38
NME1-203ENST00000393196 PCF11O94913 1555 aaKnown RBP29.9■■■□□ 2.38
NME1-203ENST00000393196 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
NME1-203ENST00000393196 MAGI3Q5TCQ9 1506 aa29.88■■■□□ 2.37
NME1-203ENST00000393196 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
NME1-203ENST00000393196 TSPOAP1O95153 1857 aa29.82■■■□□ 2.37
NME1-203ENST00000393196 TROQ12816 1431 aaPredicted RBP29.8■■■□□ 2.36
NME1-203ENST00000393196 PHLDB1Q86UU1 1377 aa29.79■■■□□ 2.36
NME1-203ENST00000393196 PPRC1Q5VV67 1664 aaKnown RBP29.79■■■□□ 2.36
NME1-203ENST00000393196 KDM6BO15054 1643 aa29.77■■■□□ 2.36
NME1-203ENST00000393196 VPS8Q8N3P4 1428 aa29.74■■■□□ 2.35
NME1-203ENST00000393196 KIF14Q15058 1648 aa29.71■■■□□ 2.35
NME1-203ENST00000393196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.71■■■□□ 2.355e-7■■■□□ 18.6
NME1-203ENST00000393196 NEO1Q92859 1461 aa29.7■■■□□ 2.35
NME1-203ENST00000393196 LRRIQ1Q96JM4 1722 aa29.67■■■□□ 2.34
NME1-203ENST00000393196 TTC37Q6PGP7 1564 aa29.63■■■□□ 2.33
NME1-203ENST00000393196 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
NME1-203ENST00000393196 PLCH2O75038 1416 aa29.62■■■□□ 2.33
NME1-203ENST00000393196 ARAP3Q8WWN8 1544 aa29.61■■■□□ 2.33
NME1-203ENST00000393196 CFAP74Q9C0B2 1584 aa29.6■■■□□ 2.33
NME1-203ENST00000393196 FANCAO15360 1455 aa29.59■■■□□ 2.33
NME1-203ENST00000393196 COL17A1Q9UMD9 1497 aaPredicted RBP29.57■■■□□ 2.32
NME1-203ENST00000393196 EFCAB2Q5VUJ9 269 aa29.57■■■□□ 2.32
NME1-203ENST00000393196 AKNAQ7Z591 1439 aa29.54■■■□□ 2.32
NME1-203ENST00000393196 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
NME1-203ENST00000393196 MAP3K1Q13233 1512 aa29.52■■■□□ 2.32
NME1-203ENST00000393196 MYO5CQ9NQX4 1742 aa29.51■■■□□ 2.31
NME1-203ENST00000393196 APLP2Q06481 763 aa29.5■■■□□ 2.31
NME1-203ENST00000393196 TIAM1Q13009 1591 aa29.48■■■□□ 2.31
NME1-203ENST00000393196 ARHGAP5Q13017 1502 aa29.47■■■□□ 2.31
NME1-203ENST00000393196 DENND4BO75064 1496 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms