RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
SHTN1-204ENST00000392903 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
SHTN1-204ENST00000392903 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
SHTN1-204ENST00000392903 TDRD9Q8NDG6 1382 aaKnown RBP22■■□□□ 1.11
SHTN1-204ENST00000392903 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
SHTN1-204ENST00000392903 ITGAEP38570 1179 aa21.98■■□□□ 1.11
SHTN1-204ENST00000392903 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
SHTN1-204ENST00000392903 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
SHTN1-204ENST00000392903 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
SHTN1-204ENST00000392903 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
SHTN1-204ENST00000392903 TIAM1Q13009 1591 aa21.9■■□□□ 1.1
SHTN1-204ENST00000392903 CUL7Q14999 1698 aa21.89■■□□□ 1.1
SHTN1-204ENST00000392903 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
SHTN1-204ENST00000392903 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
SHTN1-204ENST00000392903 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
SHTN1-204ENST00000392903 LRRC9Q6ZRR7 1453 aa21.84■■□□□ 1.09
SHTN1-204ENST00000392903 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
SHTN1-204ENST00000392903 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
SHTN1-204ENST00000392903 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
SHTN1-204ENST00000392903 SUPT16HQ9Y5B9 1047 aaKnown RBP21.82■■□□□ 1.08
SHTN1-204ENST00000392903 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
SHTN1-204ENST00000392903 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
SHTN1-204ENST00000392903 PHLDB1Q86UU1 1377 aa21.79■■□□□ 1.08
SHTN1-204ENST00000392903 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.08
SHTN1-204ENST00000392903 EFCAB5A4FU69 1503 aa21.76■■□□□ 1.07
SHTN1-204ENST00000392903 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
SHTN1-204ENST00000392903 ANP32EQ9BTT0 268 aa21.72■■□□□ 1.07
SHTN1-204ENST00000392903 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
SHTN1-204ENST00000392903 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
SHTN1-204ENST00000392903 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
SHTN1-204ENST00000392903 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.074e-9■□□□□ 8.9
SHTN1-204ENST00000392903 TSHZ2Q9NRE2 1034 aa21.69■■□□□ 1.06
SHTN1-204ENST00000392903 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
SHTN1-204ENST00000392903 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
SHTN1-204ENST00000392903 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
SHTN1-204ENST00000392903 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
SHTN1-204ENST00000392903 SAMD9Q5K651 1589 aa21.61■■□□□ 1.05
SHTN1-204ENST00000392903 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
SHTN1-204ENST00000392903 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
SHTN1-204ENST00000392903 MTUS2Q5JR59 1369 aa21.59■■□□□ 1.05
SHTN1-204ENST00000392903 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
SHTN1-204ENST00000392903 BCL11AQ9H165 835 aa21.55■■□□□ 1.04
SHTN1-204ENST00000392903 LRRIQ1Q96JM4 1722 aa21.54■■□□□ 1.04
SHTN1-204ENST00000392903 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
SHTN1-204ENST00000392903 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
SHTN1-204ENST00000392903 FGD6Q6ZV73 1430 aa21.49■■□□□ 1.03
SHTN1-204ENST00000392903 ARID3CA6NKF2 412 aa21.49■■□□□ 1.03
SHTN1-204ENST00000392903 MAPKBP1O60336 1514 aa21.49■■□□□ 1.03
SHTN1-204ENST00000392903 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
SHTN1-204ENST00000392903 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
SHTN1-204ENST00000392903 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
SHTN1-204ENST00000392903 WDR62O43379 1518 aa21.45■■□□□ 1.02
SHTN1-204ENST00000392903 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
SHTN1-204ENST00000392903 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
SHTN1-204ENST00000392903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.02
SHTN1-204ENST00000392903 MAGI3Q5TCQ9 1506 aa21.39■■□□□ 1.02
SHTN1-204ENST00000392903 PTPRKQ15262 1439 aa21.39■■□□□ 1.01
SHTN1-204ENST00000392903 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.01
SHTN1-204ENST00000392903 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
SHTN1-204ENST00000392903 SUPT6HQ7KZ85 1726 aaKnown RBP21.38■■□□□ 1.01
SHTN1-204ENST00000392903 EHBP1L1Q8N3D4 1523 aa21.36■■□□□ 1.01
SHTN1-204ENST00000392903 FBLN2P98095 1184 aa21.35■■□□□ 1.01
SHTN1-204ENST00000392903 EIF4G3O43432 1585 aaKnown RBP21.34■■□□□ 1.01
SHTN1-204ENST00000392903 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
SHTN1-204ENST00000392903 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
SHTN1-204ENST00000392903 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
SHTN1-204ENST00000392903 HECW1Q76N89 1606 aa21.33■■□□□ 1
SHTN1-204ENST00000392903 CHIC2Q9UKJ5 165 aa21.31■■□□□ 1
SHTN1-204ENST00000392903 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
SHTN1-204ENST00000392903 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
SHTN1-204ENST00000392903 KIAA0586Q9BVV6 1533 aa21.3■■□□□ 1
SHTN1-204ENST00000392903 GRIN2AQ12879 1464 aa21.3■■□□□ 1
SHTN1-204ENST00000392903 PTPN23Q9H3S7 1636 aa21.28■■□□□ 1
SHTN1-204ENST00000392903 HFM1A2PYH4 1435 aa21.27■■□□□ 1
SHTN1-204ENST00000392903 RRP7BPQ9NSQ0 103 aa21.27■■□□□ 1
SHTN1-204ENST00000392903 DISP1Q96F81 1524 aa21.27■■□□□ 1
SHTN1-204ENST00000392903 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
SHTN1-204ENST00000392903 NAIPQ13075 1403 aa21.25■□□□□ 0.99
SHTN1-204ENST00000392903 KIAA0556O60303 1618 aa21.23■□□□□ 0.99
SHTN1-204ENST00000392903 KCNH8Q96L42 1107 aa21.22■□□□□ 0.99
SHTN1-204ENST00000392903 FKBP8Q14318 412 aa21.21■□□□□ 0.99
SHTN1-204ENST00000392903 BCANQ96GW7 911 aa21.19■□□□□ 0.98
SHTN1-204ENST00000392903 RBM19Q9Y4C8 960 aaKnown RBP21.19■□□□□ 0.98
SHTN1-204ENST00000392903 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
SHTN1-204ENST00000392903 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
SHTN1-204ENST00000392903 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
SHTN1-204ENST00000392903 PPP1R15AO75807 674 aaPredicted RBP21.18■□□□□ 0.98
SHTN1-204ENST00000392903 TIMELESSQ9UNS1 1208 aa21.18■□□□□ 0.98
SHTN1-204ENST00000392903 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
SHTN1-204ENST00000392903 NUP153P49790 1475 aaKnown RBP21.17■□□□□ 0.98
SHTN1-204ENST00000392903 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
SHTN1-204ENST00000392903 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
SHTN1-204ENST00000392903 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
SHTN1-204ENST00000392903 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
SHTN1-204ENST00000392903 TONSLQ96HA7 1378 aa21.13■□□□□ 0.97
SHTN1-204ENST00000392903 ZNF644Q9H582 1327 aaPredicted RBP21.13■□□□□ 0.97
SHTN1-204ENST00000392903 RAPGEF6Q8TEU7 1601 aa21.13■□□□□ 0.97
SHTN1-204ENST00000392903 MIA2Q96PC5 1412 aa21.12■□□□□ 0.97
SHTN1-204ENST00000392903 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
SHTN1-204ENST00000392903 PLB1Q6P1J6 1458 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms