RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 SLC39A7Q92504 469 aa5.74□□□□□ -1.49
RNU6-1239P-201ENST00000391310 ATMINO43313 823 aaPredicted RBP5.72□□□□□ -1.49
RNU6-1239P-201ENST00000391310 NPM1P06748 294 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNU6-1239P-201ENST00000391310 FAM163AQ96GL9 167 aaPredicted RBP5.71□□□□□ -1.5
RNU6-1239P-201ENST00000391310 SCUBE2Q9NQ36 999 aa5.7□□□□□ -1.5
RNU6-1239P-201ENST00000391310 MNX1P50219 401 aaPredicted RBP5.69□□□□□ -1.5
RNU6-1239P-201ENST00000391310 MS4A3Q96HJ5 214 aa5.69□□□□□ -1.5
RNU6-1239P-201ENST00000391310 ATN1P54259 1190 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1239P-201ENST00000391310 CDAN1Q8IWY9 1227 aa5.63□□□□□ -1.51
RNU6-1239P-201ENST00000391310 POTEFA5A3E0 1075 aa5.61□□□□□ -1.51
RNU6-1239P-201ENST00000391310 SPDYE4A6NLX3 237 aa5.59□□□□□ -1.51
RNU6-1239P-201ENST00000391310 CCDC61Q9Y6R9 512 aa5.59□□□□□ -1.51
RNU6-1239P-201ENST00000391310 BMP2KQ9NSY1 1161 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1239P-201ENST00000391310 KIF12Q96FN5 646 aa5.57□□□□□ -1.52
RNU6-1239P-201ENST00000391310 TIE1P35590 1138 aa5.56□□□□□ -1.52
RNU6-1239P-201ENST00000391310 TSPYL2Q9H2G4 693 aaPredicted RBP5.56□□□□□ -1.52
RNU6-1239P-201ENST00000391310 COLQQ9Y215 455 aaPredicted RBP5.55□□□□□ -1.52
RNU6-1239P-201ENST00000391310 SEC24BO95487 1268 aa5.54□□□□□ -1.52
RNU6-1239P-201ENST00000391310 TRPC6Q9Y210 931 aa5.54□□□□□ -1.52
RNU6-1239P-201ENST00000391310 ST18O60284 1047 aa5.52□□□□□ -1.53
RNU6-1239P-201ENST00000391310 MMRN1Q13201 1228 aa5.52□□□□□ -1.53
RNU6-1239P-201ENST00000391310 IER5LQ5T953 404 aa5.52□□□□□ -1.53
RNU6-1239P-201ENST00000391310 TTLL13PA6NNM8 815 aa5.51□□□□□ -1.53
RNU6-1239P-201ENST00000391310 MAP3K13O43283 966 aa5.51□□□□□ -1.53
RNU6-1239P-201ENST00000391310 SPNS2Q8IVW8 549 aa5.5□□□□□ -1.53
RNU6-1239P-201ENST00000391310 SLAIN1Q8ND83 568 aa5.49□□□□□ -1.53
RNU6-1239P-201ENST00000391310 TMEM121BQ9BXQ6 578 aaPredicted RBP5.48□□□□□ -1.53
RNU6-1239P-201ENST00000391310 TRIM35Q9UPQ4 493 aa5.47□□□□□ -1.53
RNU6-1239P-201ENST00000391310 SGIP1Q9BQI5 828 aa5.45□□□□□ -1.54
RNU6-1239P-201ENST00000391310 RASEFQ8IZ41 740 aa5.44□□□□□ -1.54
RNU6-1239P-201ENST00000391310 PROM2Q8N271 834 aa5.44□□□□□ -1.54
RNU6-1239P-201ENST00000391310 CSRNP3Q8WYN3 585 aa5.44□□□□□ -1.54
RNU6-1239P-201ENST00000391310 SNPHO15079 494 aa5.42□□□□□ -1.54
RNU6-1239P-201ENST00000391310 PLEKHG5O94827 1062 aa5.41□□□□□ -1.54
RNU6-1239P-201ENST00000391310 PLCG2P16885 1265 aa5.41□□□□□ -1.54
RNU6-1239P-201ENST00000391310 PCDHB13Q9Y5F0 798 aa5.41□□□□□ -1.54
RNU6-1239P-201ENST00000391310 IRX5P78411 483 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1239P-201ENST00000391310 MARVELD3Q96A59 401 aa5.39□□□□□ -1.55
RNU6-1239P-201ENST00000391310 TMEM106CQ9BVX2 250 aa5.38□□□□□ -1.55
RNU6-1239P-201ENST00000391310 IFNL1Q8IU54 200 aa5.37□□□□□ -1.55
RNU6-1239P-201ENST00000391310 MIER1Q8N108 512 aa5.37□□□□□ -1.55
RNU6-1239P-201ENST00000391310 OCEL1Q9H607 264 aa5.36□□□□□ -1.55
RNU6-1239P-201ENST00000391310 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.36□□□□□ -1.55
RNU6-1239P-201ENST00000391310 EMP3P54852 163 aa5.33□□□□□ -1.56
RNU6-1239P-201ENST00000391310 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
RNU6-1239P-201ENST00000391310 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
RNU6-1239P-201ENST00000391310 NUBP1P53384 320 aa5.32□□□□□ -1.56
RNU6-1239P-201ENST00000391310 POTEB3A0JP26 581 aa5.3□□□□□ -1.56
RNU6-1239P-201ENST00000391310 POTEBQ6S5H4 581 aa5.3□□□□□ -1.56
RNU6-1239P-201ENST00000391310 HS3ST6Q96QI5 342 aa5.3□□□□□ -1.56
RNU6-1239P-201ENST00000391310 ZBTB47Q9UFB7 747 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1239P-201ENST00000391310 FAM212AQ96EL1 285 aa5.29□□□□□ -1.56
RNU6-1239P-201ENST00000391310 PLCD3Q8N3E9 789 aa5.28□□□□□ -1.56
RNU6-1239P-201ENST00000391310 FAM205CA6NFA0 338 aa5.27□□□□□ -1.57
RNU6-1239P-201ENST00000391310 C3orf67Q6ZVT6 689 aa5.27□□□□□ -1.57
RNU6-1239P-201ENST00000391310 PDCD7Q8N8D1 485 aaKnown RBP5.26□□□□□ -1.57
RNU6-1239P-201ENST00000391310 L3MBTL3Q96JM7 780 aaPredicted RBP5.24□□□□□ -1.57
RNU6-1239P-201ENST00000391310 RNF166Q96A37 237 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1239P-201ENST00000391310 PCDHB8Q9UN66 801 aa5.21□□□□□ -1.58
RNU6-1239P-201ENST00000391310 PYGBP11216 843 aa5.2□□□□□ -1.58
RNU6-1239P-201ENST00000391310 HOXB3P14651 431 aaPredicted RBP5.18□□□□□ -1.58
RNU6-1239P-201ENST00000391310 MKRN3Q13064 507 aaKnown RBP5.18□□□□□ -1.58
RNU6-1239P-201ENST00000391310 HOXB1P14653 301 aaPredicted RBP5.17□□□□□ -1.58
RNU6-1239P-201ENST00000391310 GOLGA2Q08379 1002 aa5.17□□□□□ -1.58
RNU6-1239P-201ENST00000391310 DCAF8Q5TAQ9 597 aa5.17□□□□□ -1.58
RNU6-1239P-201ENST00000391310 ILDR1Q86SU0 546 aaPredicted RBP5.17□□□□□ -1.58
RNU6-1239P-201ENST00000391310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.17□□□□□ -1.58
RNU6-1239P-201ENST00000391310 EHMT2Q96KQ7 1210 aa5.16□□□□□ -1.58
RNU6-1239P-201ENST00000391310 MYT1LQ9UL68 1186 aa5.16□□□□□ -1.58
RNU6-1239P-201ENST00000391310 ZNF467Q7Z7K2 595 aaPredicted RBP5.15□□□□□ -1.59
RNU6-1239P-201ENST00000391310 ERBB3P21860 1342 aa5.15□□□□□ -1.59
RNU6-1239P-201ENST00000391310 ZNF710Q8N1W2 664 aa5.14□□□□□ -1.59
RNU6-1239P-201ENST00000391310 PTGER2P43116 358 aa5.13□□□□□ -1.59
RNU6-1239P-201ENST00000391310 DOK7Q18PE1 504 aa5.13□□□□□ -1.59
RNU6-1239P-201ENST00000391310 VARS2Q5ST30 1063 aaKnown RBP5.11□□□□□ -1.59
RNU6-1239P-201ENST00000391310 BOLA1Q9Y3E2 137 aa5.11□□□□□ -1.59
RNU6-1239P-201ENST00000391310 G3V3G9 751 aa5.1□□□□□ -1.59
RNU6-1239P-201ENST00000391310 RIMBP2O15034 1052 aa5.1□□□□□ -1.59
RNU6-1239P-201ENST00000391310 CHRM1P11229 460 aaPredicted RBP5.1□□□□□ -1.59
RNU6-1239P-201ENST00000391310 PSEN1P49768 467 aa5.1□□□□□ -1.59
RNU6-1239P-201ENST00000391310 DPY19L2Q6NUT2 758 aa5.1□□□□□ -1.59
RNU6-1239P-201ENST00000391310 ZNF687Q8N1G0 1237 aa5.09□□□□□ -1.59
RNU6-1239P-201ENST00000391310 ZSWIM6Q9HCJ5 1215 aa5.08□□□□□ -1.6
RNU6-1239P-201ENST00000391310 GSE1Q14687 1217 aa5.07□□□□□ -1.6
RNU6-1239P-201ENST00000391310 PDAP1Q13442 181 aaKnown RBP5.05□□□□□ -1.6
RNU6-1239P-201ENST00000391310 GPR153Q6NV75 609 aa5.03□□□□□ -1.6
RNU6-1239P-201ENST00000391310 CABP2Q9NPB3 220 aa5.03□□□□□ -1.6
RNU6-1239P-201ENST00000391310 ANKRD13DQ6ZTN6 518 aa5.02□□□□□ -1.61
RNU6-1239P-201ENST00000391310 PLA2G2EQ9NZK7 142 aa5.01□□□□□ -1.61
RNU6-1239P-201ENST00000391310 LSM11P83369 360 aaKnown RBP eCLIP5□□□□□ -1.61
RNU6-1239P-201ENST00000391310 FBXO3Q9UK99 471 aa4.99□□□□□ -1.61
RNU6-1239P-201ENST00000391310 TMEM92Q6UXU6 159 aa4.98□□□□□ -1.61
RNU6-1239P-201ENST00000391310 MICALL2Q8IY33 904 aa4.97□□□□□ -1.61
RNU6-1239P-201ENST00000391310 KLHL34Q8N239 644 aa4.97□□□□□ -1.61
RNU6-1239P-201ENST00000391310 HCSTQ9UBK5 93 aa4.97□□□□□ -1.61
RNU6-1239P-201ENST00000391310 ZNF316A6NFI3 1004 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1239P-201ENST00000391310 ARSIQ5FYB1 569 aa4.96□□□□□ -1.62
RNU6-1239P-201ENST00000391310 PBX2P40425 430 aa4.95□□□□□ -1.62
RNU6-1239P-201ENST00000391310 FKBP8Q14318 412 aa4.94□□□□□ -1.62
RNU6-1239P-201ENST00000391310 VASPP50552 380 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms