RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 APLP2Q06481 763 aa26.18■■□□□ 1.78
LITAF-202ENST00000381810 HRCP23327 699 aa26.17■■□□□ 1.78
LITAF-202ENST00000381810 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
LITAF-202ENST00000381810 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.77
LITAF-202ENST00000381810 EFCAB5A4FU69 1503 aa26.14■■□□□ 1.77
LITAF-202ENST00000381810 EIF4G3O43432 1585 aaKnown RBP26.13■■□□□ 1.77
LITAF-202ENST00000381810 SAMD9Q5K651 1589 aa26.01■■□□□ 1.75
LITAF-202ENST00000381810 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
LITAF-202ENST00000381810 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
LITAF-202ENST00000381810 MAP3K1Q13233 1512 aa25.96■■□□□ 1.75
LITAF-202ENST00000381810 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
LITAF-202ENST00000381810 PCF11O94913 1555 aaKnown RBP25.94■■□□□ 1.74
LITAF-202ENST00000381810 IQGAP2Q13576 1575 aa25.94■■□□□ 1.74
LITAF-202ENST00000381810 P3H3Q8IVL6 736 aa25.93■■□□□ 1.74
LITAF-202ENST00000381810 TIAM1Q13009 1591 aa25.92■■□□□ 1.74
LITAF-202ENST00000381810 CFAP43Q8NDM7 1665 aa25.9■■□□□ 1.74
LITAF-202ENST00000381810 KANK4Q5T7N3 995 aaPredicted RBP25.88■■□□□ 1.73
LITAF-202ENST00000381810 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
LITAF-202ENST00000381810 FYCO1Q9BQS8 1478 aa25.88■■□□□ 1.73
LITAF-202ENST00000381810 FMN1Q68DA7 1419 aa25.87■■□□□ 1.73
LITAF-202ENST00000381810 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
LITAF-202ENST00000381810 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
LITAF-202ENST00000381810 KIAA0586Q9BVV6 1533 aa25.81■■□□□ 1.72
LITAF-202ENST00000381810 UGGT2Q9NYU1 1516 aa25.81■■□□□ 1.72
LITAF-202ENST00000381810 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
LITAF-202ENST00000381810 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
LITAF-202ENST00000381810 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
LITAF-202ENST00000381810 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
LITAF-202ENST00000381810 RRBP1Q9P2E9 1410 aaKnown RBP25.7■■□□□ 1.71
LITAF-202ENST00000381810 LRRIQ1Q96JM4 1722 aa25.7■■□□□ 1.7
LITAF-202ENST00000381810 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.7
LITAF-202ENST00000381810 NUP160Q12769 1436 aa25.67■■□□□ 1.7
LITAF-202ENST00000381810 KIAA0556O60303 1618 aa25.67■■□□□ 1.7
LITAF-202ENST00000381810 DISP1Q96F81 1524 aa25.64■■□□□ 1.7
LITAF-202ENST00000381810 FBLN2P98095 1184 aa25.63■■□□□ 1.69
LITAF-202ENST00000381810 HNRNPUL2Q1KMD3 747 aaKnown RBP25.63■■□□□ 1.69
LITAF-202ENST00000381810 HECW1Q76N89 1606 aa25.62■■□□□ 1.69
LITAF-202ENST00000381810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.61■■□□□ 1.69
LITAF-202ENST00000381810 CCNB3Q8WWL7 1395 aa25.59■■□□□ 1.69
LITAF-202ENST00000381810 CCDC18Q5T9S5 1454 aa25.57■■□□□ 1.68
LITAF-202ENST00000381810 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
LITAF-202ENST00000381810 CHD1O14646 1710 aa25.56■■□□□ 1.68
LITAF-202ENST00000381810 PHLDB1Q86UU1 1377 aa25.53■■□□□ 1.68
LITAF-202ENST00000381810 EHBP1L1Q8N3D4 1523 aa25.5■■□□□ 1.67
LITAF-202ENST00000381810 MTUS2Q5JR59 1369 aa25.5■■□□□ 1.67
LITAF-202ENST00000381810 EPRSP07814 1512 aaKnown RBP25.48■■□□□ 1.67
LITAF-202ENST00000381810 SUPT6HQ7KZ85 1726 aaKnown RBP25.47■■□□□ 1.67
LITAF-202ENST00000381810 CARMIL2Q6F5E8 1435 aa25.47■■□□□ 1.67
LITAF-202ENST00000381810 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
LITAF-202ENST00000381810 RAPGEF6Q8TEU7 1601 aa25.47■■□□□ 1.67
LITAF-202ENST00000381810 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
LITAF-202ENST00000381810 CDK13Q14004 1512 aaKnown RBP25.4■■□□□ 1.66
LITAF-202ENST00000381810 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
LITAF-202ENST00000381810 NUP153P49790 1475 aaKnown RBP25.37■■□□□ 1.65
LITAF-202ENST00000381810 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
LITAF-202ENST00000381810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.37■■□□□ 1.65
LITAF-202ENST00000381810 FGD6Q6ZV73 1430 aa25.34■■□□□ 1.65
LITAF-202ENST00000381810 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
LITAF-202ENST00000381810 FAM50AQ14320 339 aaKnown RBP25.32■■□□□ 1.64
LITAF-202ENST00000381810 MYOM3Q5VTT5 1437 aa25.31■■□□□ 1.64
LITAF-202ENST00000381810 PLB1Q6P1J6 1458 aa25.29■■□□□ 1.64
LITAF-202ENST00000381810 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
LITAF-202ENST00000381810 ITGAEP38570 1179 aa25.29■■□□□ 1.64
LITAF-202ENST00000381810 ABCA8O94911 1581 aa25.28■■□□□ 1.64
LITAF-202ENST00000381810 ARID3CA6NKF2 412 aa25.25■■□□□ 1.63
LITAF-202ENST00000381810 PTPN23Q9H3S7 1636 aa25.24■■□□□ 1.63
LITAF-202ENST00000381810 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
LITAF-202ENST00000381810 CDK11AQ9UQ88 783 aaPredicted RBP25.2■■□□□ 1.62
LITAF-202ENST00000381810 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
LITAF-202ENST00000381810 PTPRGP23470 1445 aa25.17■■□□□ 1.62
LITAF-202ENST00000381810 SETD5Q9C0A6 1442 aa25.17■■□□□ 1.62
LITAF-202ENST00000381810 TCOF1Q13428 1488 aaKnown RBP25.17■■□□□ 1.62
LITAF-202ENST00000381810 TROQ12816 1431 aaPredicted RBP25.16■■□□□ 1.62
LITAF-202ENST00000381810 ADCY10Q96PN6 1610 aa25.16■■□□□ 1.62
LITAF-202ENST00000381810 MIA2Q96PC5 1412 aa25.14■■□□□ 1.62
LITAF-202ENST00000381810 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.62
LITAF-202ENST00000381810 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
LITAF-202ENST00000381810 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
LITAF-202ENST00000381810 ATP10BO94823 1461 aa25.09■■□□□ 1.61
LITAF-202ENST00000381810 ITSN2Q9NZM3 1697 aa25.07■■□□□ 1.6
LITAF-202ENST00000381810 PTPRKQ15262 1439 aa25.06■■□□□ 1.6
LITAF-202ENST00000381810 KIF14Q15058 1648 aa25.06■■□□□ 1.6
LITAF-202ENST00000381810 UACAQ9BZF9 1416 aa25.05■■□□□ 1.6
LITAF-202ENST00000381810 HFM1A2PYH4 1435 aa25■■□□□ 1.59
LITAF-202ENST00000381810 PLEKHD1A6NEE1 506 aa24.99■■□□□ 1.59
LITAF-202ENST00000381810 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
LITAF-202ENST00000381810 GPATCH8Q9UKJ3 1502 aaKnown RBP24.95■■□□□ 1.59
LITAF-202ENST00000381810 GCC2Q8IWJ2 1684 aa24.95■■□□□ 1.59
LITAF-202ENST00000381810 DNMT1P26358 1616 aaKnown RBP24.95■■□□□ 1.58
LITAF-202ENST00000381810 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.58
LITAF-202ENST00000381810 ABCC10Q5T3U5 1492 aa24.93■■□□□ 1.58
LITAF-202ENST00000381810 NAIPQ13075 1403 aa24.93■■□□□ 1.58
LITAF-202ENST00000381810 AKNAQ7Z591 1439 aa24.93■■□□□ 1.58
LITAF-202ENST00000381810 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
LITAF-202ENST00000381810 DAPK1P53355 1430 aa24.9■■□□□ 1.58
LITAF-202ENST00000381810 UHRF1BP1LA0JNW5 1464 aa24.89■■□□□ 1.57
LITAF-202ENST00000381810 CAMSAP2Q08AD1 1489 aa24.89■■□□□ 1.57
LITAF-202ENST00000381810 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
LITAF-202ENST00000381810 ABCC5O15440 1437 aa24.86■■□□□ 1.57
LITAF-202ENST00000381810 ZNF644Q9H582 1327 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms