RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
ERCC8-202ENST00000381118 ARHGAP35Q9NRY4 1499 aa12.6□□□□□ -0.39
ERCC8-202ENST00000381118 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.39
ERCC8-202ENST00000381118 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
ERCC8-202ENST00000381118 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
ERCC8-202ENST00000381118 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
ERCC8-202ENST00000381118 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
ERCC8-202ENST00000381118 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
ERCC8-202ENST00000381118 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
ERCC8-202ENST00000381118 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
ERCC8-202ENST00000381118 CHD1O14646 1710 aa12.53□□□□□ -0.4
ERCC8-202ENST00000381118 CEP170Q5SW79 1584 aa12.52□□□□□ -0.4
ERCC8-202ENST00000381118 FHOD3Q2V2M9 1422 aa12.52□□□□□ -0.41
ERCC8-202ENST00000381118 EFCAB5A4FU69 1503 aa12.51□□□□□ -0.41
ERCC8-202ENST00000381118 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
ERCC8-202ENST00000381118 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
ERCC8-202ENST00000381118 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
ERCC8-202ENST00000381118 APLP2Q06481 763 aa12.47□□□□□ -0.41
ERCC8-202ENST00000381118 NUP160Q12769 1436 aa12.46□□□□□ -0.41
ERCC8-202ENST00000381118 ATP1B4Q9UN42 357 aaPredicted RBP12.45□□□□□ -0.42
ERCC8-202ENST00000381118 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
ERCC8-202ENST00000381118 UGGT2Q9NYU1 1516 aa12.44□□□□□ -0.42
ERCC8-202ENST00000381118 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
ERCC8-202ENST00000381118 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
ERCC8-202ENST00000381118 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
ERCC8-202ENST00000381118 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
ERCC8-202ENST00000381118 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
ERCC8-202ENST00000381118 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
ERCC8-202ENST00000381118 KANK4Q5T7N3 995 aaPredicted RBP12.37□□□□□ -0.43
ERCC8-202ENST00000381118 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
ERCC8-202ENST00000381118 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
ERCC8-202ENST00000381118 TIAM1Q13009 1591 aa12.36□□□□□ -0.43
ERCC8-202ENST00000381118 CFAP43Q8NDM7 1665 aa12.35□□□□□ -0.43
ERCC8-202ENST00000381118 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
ERCC8-202ENST00000381118 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
ERCC8-202ENST00000381118 ARID3CA6NKF2 412 aa12.32□□□□□ -0.44
ERCC8-202ENST00000381118 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
ERCC8-202ENST00000381118 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
ERCC8-202ENST00000381118 CLASP1Q7Z460 1538 aa12.31□□□□□ -0.44
ERCC8-202ENST00000381118 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
ERCC8-202ENST00000381118 LRRC9Q6ZRR7 1453 aa12.29□□□□□ -0.44
ERCC8-202ENST00000381118 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
ERCC8-202ENST00000381118 ERCC6L2Q5T890 1561 aa12.29□□□□□ -0.44
ERCC8-202ENST00000381118 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
ERCC8-202ENST00000381118 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.45
ERCC8-202ENST00000381118 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
ERCC8-202ENST00000381118 CCDC18Q5T9S5 1454 aa12.25□□□□□ -0.45
ERCC8-202ENST00000381118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
ERCC8-202ENST00000381118 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
ERCC8-202ENST00000381118 NUP153P49790 1475 aaKnown RBP12.24□□□□□ -0.45
ERCC8-202ENST00000381118 MTUS2Q5JR59 1369 aa12.24□□□□□ -0.45
ERCC8-202ENST00000381118 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
ERCC8-202ENST00000381118 PTPRGP23470 1445 aa12.23□□□□□ -0.45
ERCC8-202ENST00000381118 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
ERCC8-202ENST00000381118 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
ERCC8-202ENST00000381118 ABCA8O94911 1581 aa12.21□□□□□ -0.45
ERCC8-202ENST00000381118 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
ERCC8-202ENST00000381118 PHLDB1Q86UU1 1377 aa12.19□□□□□ -0.46
ERCC8-202ENST00000381118 SUPT6HQ7KZ85 1726 aaKnown RBP12.19□□□□□ -0.46
ERCC8-202ENST00000381118 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
ERCC8-202ENST00000381118 RRBP1Q9P2E9 1410 aaKnown RBP12.16□□□□□ -0.46
ERCC8-202ENST00000381118 UACAQ9BZF9 1416 aa12.16□□□□□ -0.46
ERCC8-202ENST00000381118 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
ERCC8-202ENST00000381118 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
ERCC8-202ENST00000381118 ATP10BO94823 1461 aa12.14□□□□□ -0.47
ERCC8-202ENST00000381118 ITGAEP38570 1179 aa12.14□□□□□ -0.47
ERCC8-202ENST00000381118 ABCC2Q92887 1545 aa12.13□□□□□ -0.47
ERCC8-202ENST00000381118 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
ERCC8-202ENST00000381118 KIF14Q15058 1648 aa12.11□□□□□ -0.47
ERCC8-202ENST00000381118 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
ERCC8-202ENST00000381118 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
ERCC8-202ENST00000381118 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
ERCC8-202ENST00000381118 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
ERCC8-202ENST00000381118 PLEKHD1A6NEE1 506 aa12.09□□□□□ -0.47
ERCC8-202ENST00000381118 ZCCHC11Q5TAX3 1644 aaKnown RBP12.09□□□□□ -0.47
ERCC8-202ENST00000381118 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
ERCC8-202ENST00000381118 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
ERCC8-202ENST00000381118 UHRF1BP1LA0JNW5 1464 aa12.05□□□□□ -0.48
ERCC8-202ENST00000381118 KDM5BQ9UGL1 1544 aa12.03□□□□□ -0.48
ERCC8-202ENST00000381118 ITSN2Q9NZM3 1697 aa12.03□□□□□ -0.48
ERCC8-202ENST00000381118 CDC42BPAQ5VT25 1732 aa12.02□□□□□ -0.48
ERCC8-202ENST00000381118 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
ERCC8-202ENST00000381118 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.49
ERCC8-202ENST00000381118 RIMBP3CA6NJZ7 1639 aa12.01□□□□□ -0.49
ERCC8-202ENST00000381118 RIMBP3BA6NNM3 1639 aa12.01□□□□□ -0.49
ERCC8-202ENST00000381118 RIMBP3Q9UFD9 1639 aa12.01□□□□□ -0.49
ERCC8-202ENST00000381118 HRCP23327 699 aa12.01□□□□□ -0.49
ERCC8-202ENST00000381118 MIA2Q96PC5 1412 aa12□□□□□ -0.49
ERCC8-202ENST00000381118 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
ERCC8-202ENST00000381118 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
ERCC8-202ENST00000381118 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
ERCC8-202ENST00000381118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12□□□□□ -0.49
ERCC8-202ENST00000381118 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
ERCC8-202ENST00000381118 CFDP1Q9UEE9 299 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-202ENST00000381118 ZNF644Q9H582 1327 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-202ENST00000381118 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
ERCC8-202ENST00000381118 TCOF1Q13428 1488 aaKnown RBP11.99□□□□□ -0.49
ERCC8-202ENST00000381118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
ERCC8-202ENST00000381118 CYB5RLQ6IPT4 315 aa11.98□□□□□ -0.49
ERCC8-202ENST00000381118 CDC42BPBQ9Y5S2 1711 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms