RNA–Protein interactions for RNA: ENST00000377351.8

UBA1-203, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-203ENST00000377351 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
UBA1-203ENST00000377351 MIER1Q8N108 512 aa13.87□□□□□ -0.19
UBA1-203ENST00000377351 RTN4Q9NQC3 1192 aaKnown RBP13.87□□□□□ -0.19
UBA1-203ENST00000377351 IGF1RP08069 1367 aa13.87□□□□□ -0.19
UBA1-203ENST00000377351 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
UBA1-203ENST00000377351 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
UBA1-203ENST00000377351 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
UBA1-203ENST00000377351 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
UBA1-203ENST00000377351 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
UBA1-203ENST00000377351 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
UBA1-203ENST00000377351 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
UBA1-203ENST00000377351 BCANQ96GW7 911 aa13.81□□□□□ -0.2
UBA1-203ENST00000377351 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
UBA1-203ENST00000377351 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
UBA1-203ENST00000377351 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
UBA1-203ENST00000377351 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
UBA1-203ENST00000377351 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.21
UBA1-203ENST00000377351 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
UBA1-203ENST00000377351 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
UBA1-203ENST00000377351 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.21
UBA1-203ENST00000377351 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
UBA1-203ENST00000377351 A0A0U1RQG5 324 aaPredicted RBP13.67□□□□□ -0.22
UBA1-203ENST00000377351 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
UBA1-203ENST00000377351 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
UBA1-203ENST00000377351 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
UBA1-203ENST00000377351 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
UBA1-203ENST00000377351 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
UBA1-203ENST00000377351 CUL7Q14999 1698 aa13.63□□□□□ -0.23
UBA1-203ENST00000377351 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
UBA1-203ENST00000377351 NBR1Q14596 966 aa13.61□□□□□ -0.23
UBA1-203ENST00000377351 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
UBA1-203ENST00000377351 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
UBA1-203ENST00000377351 GLIPR1L2Q4G1C9 344 aa13.6□□□□□ -0.23
UBA1-203ENST00000377351 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
UBA1-203ENST00000377351 NEFLP07196 543 aa13.59□□□□□ -0.23
UBA1-203ENST00000377351 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
UBA1-203ENST00000377351 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
UBA1-203ENST00000377351 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
UBA1-203ENST00000377351 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.244e-7■■■■□ 24
UBA1-203ENST00000377351 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
UBA1-203ENST00000377351 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
UBA1-203ENST00000377351 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
UBA1-203ENST00000377351 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
UBA1-203ENST00000377351 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.25
UBA1-203ENST00000377351 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
UBA1-203ENST00000377351 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
UBA1-203ENST00000377351 EFCAB5A4FU69 1503 aa13.5□□□□□ -0.25
UBA1-203ENST00000377351 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
UBA1-203ENST00000377351 WDR62O43379 1518 aa13.49□□□□□ -0.25
UBA1-203ENST00000377351 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
UBA1-203ENST00000377351 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
UBA1-203ENST00000377351 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
UBA1-203ENST00000377351 ZNF608Q9ULD9 1512 aaPredicted RBP13.48□□□□□ -0.25
UBA1-203ENST00000377351 PDE4CQ08493 712 aa13.48□□□□□ -0.25
UBA1-203ENST00000377351 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
UBA1-203ENST00000377351 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
UBA1-203ENST00000377351 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
UBA1-203ENST00000377351 MAP3K1Q13233 1512 aa13.46□□□□□ -0.25
UBA1-203ENST00000377351 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
UBA1-203ENST00000377351 ITGAEP38570 1179 aa13.46□□□□□ -0.26
UBA1-203ENST00000377351 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
UBA1-203ENST00000377351 MSH5O43196 834 aa13.45□□□□□ -0.26
UBA1-203ENST00000377351 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
UBA1-203ENST00000377351 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
UBA1-203ENST00000377351 FMN1Q68DA7 1419 aa13.45□□□□□ -0.26
UBA1-203ENST00000377351 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
UBA1-203ENST00000377351 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
UBA1-203ENST00000377351 FYCO1Q9BQS8 1478 aa13.43□□□□□ -0.26
UBA1-203ENST00000377351 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
UBA1-203ENST00000377351 FKBP8Q14318 412 aa13.41□□□□□ -0.26
UBA1-203ENST00000377351 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
UBA1-203ENST00000377351 CFAP43Q8NDM7 1665 aa13.39□□□□□ -0.27
UBA1-203ENST00000377351 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
UBA1-203ENST00000377351 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
UBA1-203ENST00000377351 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
UBA1-203ENST00000377351 SNAPC4Q5SXM2 1469 aa13.38□□□□□ -0.27
UBA1-203ENST00000377351 ZMYND15Q9H091 742 aa13.38□□□□□ -0.27
UBA1-203ENST00000377351 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
UBA1-203ENST00000377351 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
UBA1-203ENST00000377351 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
UBA1-203ENST00000377351 FBLN2P98095 1184 aa13.36□□□□□ -0.27
UBA1-203ENST00000377351 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
UBA1-203ENST00000377351 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
UBA1-203ENST00000377351 MTUS2Q5JR59 1369 aa13.35□□□□□ -0.27
UBA1-203ENST00000377351 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
UBA1-203ENST00000377351 KIAA0586Q9BVV6 1533 aa13.3□□□□□ -0.28
UBA1-203ENST00000377351 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
UBA1-203ENST00000377351 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
UBA1-203ENST00000377351 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
UBA1-203ENST00000377351 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
UBA1-203ENST00000377351 UGGT2Q9NYU1 1516 aa13.28□□□□□ -0.28
UBA1-203ENST00000377351 LRRIQ1Q96JM4 1722 aa13.28□□□□□ -0.28
UBA1-203ENST00000377351 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
UBA1-203ENST00000377351 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
UBA1-203ENST00000377351 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
UBA1-203ENST00000377351 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
UBA1-203ENST00000377351 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
UBA1-203ENST00000377351 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
UBA1-203ENST00000377351 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
UBA1-203ENST00000377351 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms