RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
TRIM27-202ENST00000377199 FHOD3Q2V2M9 1422 aa23.6■■□□□ 1.37
TRIM27-202ENST00000377199 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
TRIM27-202ENST00000377199 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
TRIM27-202ENST00000377199 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
TRIM27-202ENST00000377199 LRRC9Q6ZRR7 1453 aa23.54■■□□□ 1.36
TRIM27-202ENST00000377199 POLA1P09884 1462 aaPredicted RBP23.5■■□□□ 1.35
TRIM27-202ENST00000377199 FHAD1B1AJZ9 1412 aa23.49■■□□□ 1.35
TRIM27-202ENST00000377199 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
TRIM27-202ENST00000377199 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
TRIM27-202ENST00000377199 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
TRIM27-202ENST00000377199 PCF11O94913 1555 aaKnown RBP23.47■■□□□ 1.35
TRIM27-202ENST00000377199 SETD5Q9C0A6 1442 aa23.46■■□□□ 1.35
TRIM27-202ENST00000377199 HIRIP3Q9BW71 556 aaPredicted RBP23.46■■□□□ 1.35
TRIM27-202ENST00000377199 DNMBPQ6XZF7 1577 aa23.42■■□□□ 1.34
TRIM27-202ENST00000377199 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
TRIM27-202ENST00000377199 KCNH8Q96L42 1107 aa23.4■■□□□ 1.34
TRIM27-202ENST00000377199 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.33
TRIM27-202ENST00000377199 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
TRIM27-202ENST00000377199 MAP3K1Q13233 1512 aa23.35■■□□□ 1.33
TRIM27-202ENST00000377199 ARID3CA6NKF2 412 aa23.34■■□□□ 1.33
TRIM27-202ENST00000377199 MTUS2Q5JR59 1369 aa23.33■■□□□ 1.32
TRIM27-202ENST00000377199 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
TRIM27-202ENST00000377199 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
TRIM27-202ENST00000377199 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.32
TRIM27-202ENST00000377199 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
TRIM27-202ENST00000377199 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
TRIM27-202ENST00000377199 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
TRIM27-202ENST00000377199 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
TRIM27-202ENST00000377199 EFCAB5A4FU69 1503 aa23.21■■□□□ 1.31
TRIM27-202ENST00000377199 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
TRIM27-202ENST00000377199 CUL7Q14999 1698 aa23.19■■□□□ 1.3
TRIM27-202ENST00000377199 FGD6Q6ZV73 1430 aa23.19■■□□□ 1.3
TRIM27-202ENST00000377199 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
TRIM27-202ENST00000377199 RRP7BPQ9NSQ0 103 aa23.15■■□□□ 1.3
TRIM27-202ENST00000377199 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
TRIM27-202ENST00000377199 PDS5BQ9NTI5 1447 aa23.14■■□□□ 1.29
TRIM27-202ENST00000377199 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
TRIM27-202ENST00000377199 PTPRKQ15262 1439 aa23.13■■□□□ 1.29
TRIM27-202ENST00000377199 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
TRIM27-202ENST00000377199 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
TRIM27-202ENST00000377199 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
TRIM27-202ENST00000377199 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.299e-8■■■■■ 29.3
TRIM27-202ENST00000377199 CCDC18Q5T9S5 1454 aa23.1■■□□□ 1.29
TRIM27-202ENST00000377199 NCOA2Q15596 1464 aa23.08■■□□□ 1.29
TRIM27-202ENST00000377199 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
TRIM27-202ENST00000377199 BCANQ96GW7 911 aa23.08■■□□□ 1.29
TRIM27-202ENST00000377199 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
TRIM27-202ENST00000377199 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
TRIM27-202ENST00000377199 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
TRIM27-202ENST00000377199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.275e-6■■■□□ 14.8
TRIM27-202ENST00000377199 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
TRIM27-202ENST00000377199 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
TRIM27-202ENST00000377199 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
TRIM27-202ENST00000377199 ANP32CO43423 234 aa22.99■■□□□ 1.27
TRIM27-202ENST00000377199 HFM1A2PYH4 1435 aa22.98■■□□□ 1.27
TRIM27-202ENST00000377199 SAMD9Q5K651 1589 aa22.98■■□□□ 1.27
TRIM27-202ENST00000377199 NAIPQ13075 1403 aa22.98■■□□□ 1.27
TRIM27-202ENST00000377199 FOXD1Q16676 465 aa22.97■■□□□ 1.27
TRIM27-202ENST00000377199 UACAQ9BZF9 1416 aa22.96■■□□□ 1.27
TRIM27-202ENST00000377199 PTPN23Q9H3S7 1636 aa22.94■■□□□ 1.26
TRIM27-202ENST00000377199 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
TRIM27-202ENST00000377199 SUPT6HQ7KZ85 1726 aaKnown RBP22.91■■□□□ 1.26
TRIM27-202ENST00000377199 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
TRIM27-202ENST00000377199 FKBP8Q14318 412 aa22.9■■□□□ 1.26
TRIM27-202ENST00000377199 EHBP1L1Q8N3D4 1523 aa22.89■■□□□ 1.25
TRIM27-202ENST00000377199 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
TRIM27-202ENST00000377199 FBLN2P98095 1184 aa22.84■■□□□ 1.25
TRIM27-202ENST00000377199 UGGT2Q9NYU1 1516 aa22.84■■□□□ 1.25
TRIM27-202ENST00000377199 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.24
TRIM27-202ENST00000377199 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
TRIM27-202ENST00000377199 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
TRIM27-202ENST00000377199 IQGAP2Q13576 1575 aa22.82■■□□□ 1.24
TRIM27-202ENST00000377199 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
TRIM27-202ENST00000377199 HSPA5P11021 654 aaKnown RBP22.79■■□□□ 1.24
TRIM27-202ENST00000377199 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
TRIM27-202ENST00000377199 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
TRIM27-202ENST00000377199 HECW1Q76N89 1606 aa22.77■■□□□ 1.24
TRIM27-202ENST00000377199 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.23
TRIM27-202ENST00000377199 KDM6BO15054 1643 aa22.76■■□□□ 1.23
TRIM27-202ENST00000377199 CNGB1Q14028 1251 aaPredicted RBP22.76■■□□□ 1.23
TRIM27-202ENST00000377199 CCER2I3L3R5 266 aa22.75■■□□□ 1.23
TRIM27-202ENST00000377199 NEFLP07196 543 aa22.75■■□□□ 1.23
TRIM27-202ENST00000377199 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
TRIM27-202ENST00000377199 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
TRIM27-202ENST00000377199 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
TRIM27-202ENST00000377199 TSHZ2Q9NRE2 1034 aa22.72■■□□□ 1.23
TRIM27-202ENST00000377199 HNRNPUQ00839 825 aaKnown RBP eCLIP22.71■■□□□ 1.23
TRIM27-202ENST00000377199 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
TRIM27-202ENST00000377199 WASHC2AQ641Q2 1341 aa22.71■■□□□ 1.23
TRIM27-202ENST00000377199 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
TRIM27-202ENST00000377199 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
TRIM27-202ENST00000377199 DENND4BO75064 1496 aaPredicted RBP22.68■■□□□ 1.22
TRIM27-202ENST00000377199 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
TRIM27-202ENST00000377199 WDR62O43379 1518 aa22.67■■□□□ 1.22
TRIM27-202ENST00000377199 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
TRIM27-202ENST00000377199 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
TRIM27-202ENST00000377199 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
TRIM27-202ENST00000377199 KDM5BQ9UGL1 1544 aa22.65■■□□□ 1.22
TRIM27-202ENST00000377199 POLR3GLQ9BT43 218 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms