RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 KDM6BO15054 1643 aa17.99■□□□□ 0.47
UBD-203ENST00000377050 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
UBD-203ENST00000377050 ABCA5Q8WWZ7 1642 aa17.99■□□□□ 0.47
UBD-203ENST00000377050 HRCP23327 699 aa17.99■□□□□ 0.47
UBD-203ENST00000377050 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
UBD-203ENST00000377050 ABCC10Q5T3U5 1492 aa17.97■□□□□ 0.47
UBD-203ENST00000377050 NUP160Q12769 1436 aa17.96■□□□□ 0.47
UBD-203ENST00000377050 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
UBD-203ENST00000377050 ABCA10Q8WWZ4 1543 aa17.94■□□□□ 0.46
UBD-203ENST00000377050 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
UBD-203ENST00000377050 MAPKBP1O60336 1514 aa17.91■□□□□ 0.46
UBD-203ENST00000377050 DIP2BQ9P265 1576 aa17.91■□□□□ 0.46
UBD-203ENST00000377050 PRG4Q92954 1404 aaPredicted RBP17.87■□□□□ 0.45
UBD-203ENST00000377050 TSPOAP1O95153 1857 aa17.85■□□□□ 0.45
UBD-203ENST00000377050 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
UBD-203ENST00000377050 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
UBD-203ENST00000377050 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
UBD-203ENST00000377050 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
UBD-203ENST00000377050 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
UBD-203ENST00000377050 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
UBD-203ENST00000377050 LOC105371045A0A1W2PR82 267 aa17.74■□□□□ 0.43
UBD-203ENST00000377050 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
UBD-203ENST00000377050 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
UBD-203ENST00000377050 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
UBD-203ENST00000377050 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
UBD-203ENST00000377050 FBXO41Q8TF61 875 aa17.67■□□□□ 0.42
UBD-203ENST00000377050 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
UBD-203ENST00000377050 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
UBD-203ENST00000377050 PPRC1Q5VV67 1664 aaKnown RBP17.58■□□□□ 0.4
UBD-203ENST00000377050 GLI2P10070 1586 aa17.57■□□□□ 0.4
UBD-203ENST00000377050 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
UBD-203ENST00000377050 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.39
UBD-203ENST00000377050 TEX14Q8IWB6 1497 aa17.51■□□□□ 0.39
UBD-203ENST00000377050 ASXL2Q76L83 1435 aa17.51■□□□□ 0.39
UBD-203ENST00000377050 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
UBD-203ENST00000377050 PTPRGP23470 1445 aa17.5■□□□□ 0.39
UBD-203ENST00000377050 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
UBD-203ENST00000377050 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
UBD-203ENST00000377050 CUL7Q14999 1698 aa17.45■□□□□ 0.38
UBD-203ENST00000377050 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
UBD-203ENST00000377050 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
UBD-203ENST00000377050 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
UBD-203ENST00000377050 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
UBD-203ENST00000377050 TNIKQ9UKE5 1360 aa17.41■□□□□ 0.38
UBD-203ENST00000377050 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
UBD-203ENST00000377050 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
UBD-203ENST00000377050 EEA1Q15075 1411 aa17.37■□□□□ 0.37
UBD-203ENST00000377050 UACAQ9BZF9 1416 aa17.34■□□□□ 0.37
UBD-203ENST00000377050 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
UBD-203ENST00000377050 KIF21BO75037 1637 aa17.29■□□□□ 0.36
UBD-203ENST00000377050 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
UBD-203ENST00000377050 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
UBD-203ENST00000377050 SOCS7O14512 581 aa17.26■□□□□ 0.35
UBD-203ENST00000377050 IQGAP2Q13576 1575 aa17.26■□□□□ 0.35
UBD-203ENST00000377050 IGF1RP08069 1367 aa17.26■□□□□ 0.35
UBD-203ENST00000377050 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
UBD-203ENST00000377050 CFAP43Q8NDM7 1665 aa17.24■□□□□ 0.35
UBD-203ENST00000377050 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
UBD-203ENST00000377050 PTPRMP28827 1452 aa17.24■□□□□ 0.35
UBD-203ENST00000377050 WDR7Q9Y4E6 1490 aa17.24■□□□□ 0.35
UBD-203ENST00000377050 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
UBD-203ENST00000377050 CD109Q6YHK3 1445 aa17.21■□□□□ 0.35
UBD-203ENST00000377050 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
UBD-203ENST00000377050 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
UBD-203ENST00000377050 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
UBD-203ENST00000377050 DISP1Q96F81 1524 aa17.17■□□□□ 0.34
UBD-203ENST00000377050 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
UBD-203ENST00000377050 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
UBD-203ENST00000377050 CERKQ8TCT0 537 aa17.12■□□□□ 0.33
UBD-203ENST00000377050 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
UBD-203ENST00000377050 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
UBD-203ENST00000377050 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
UBD-203ENST00000377050 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
UBD-203ENST00000377050 BCORL1Q5H9F3 1711 aa17.09■□□□□ 0.33
UBD-203ENST00000377050 MADDQ8WXG6 1647 aa17.08■□□□□ 0.32
UBD-203ENST00000377050 GOLGA3Q08378 1498 aa17.07■□□□□ 0.32
UBD-203ENST00000377050 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
UBD-203ENST00000377050 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
UBD-203ENST00000377050 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
UBD-203ENST00000377050 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
UBD-203ENST00000377050 SPATA31D1Q6ZQQ2 1576 aa17.03■□□□□ 0.32
UBD-203ENST00000377050 RIMS1Q86UR5 1692 aaKnown RBP17.02■□□□□ 0.32
UBD-203ENST00000377050 HSPA2P54652 639 aa17.01■□□□□ 0.31
UBD-203ENST00000377050 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
UBD-203ENST00000377050 ABCA8O94911 1581 aa16.97■□□□□ 0.31
UBD-203ENST00000377050 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
UBD-203ENST00000377050 RAPGEF2Q9Y4G8 1499 aa16.95■□□□□ 0.3
UBD-203ENST00000377050 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
UBD-203ENST00000377050 NEO1Q92859 1461 aa16.93■□□□□ 0.3
UBD-203ENST00000377050 ABCA9Q8IUA7 1624 aa16.93■□□□□ 0.3
UBD-203ENST00000377050 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
UBD-203ENST00000377050 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
UBD-203ENST00000377050 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
UBD-203ENST00000377050 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
UBD-203ENST00000377050 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
UBD-203ENST00000377050 FANCAO15360 1455 aa16.88■□□□□ 0.29
UBD-203ENST00000377050 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
UBD-203ENST00000377050 FER1L4A9Z1Z3 1794 aa16.83■□□□□ 0.28
UBD-203ENST00000377050 AKNAQ7Z591 1439 aa16.83■□□□□ 0.28
UBD-203ENST00000377050 PREX1Q8TCU6 1659 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms