RNA–Protein interactions for RNA: ENST00000374907.7

ITGAV-202, Transcript of integrin subunit alpha V, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGAV, Length 6,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-202ENST00000374907 TSPY4P0CV99 314 aa21.9■■□□□ 1.1
ITGAV-202ENST00000374907 TSPY10P0CW01 314 aa21.9■■□□□ 1.1
ITGAV-202ENST00000374907 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
ITGAV-202ENST00000374907 GOLGA2Q08379 1002 aa21.8■■□□□ 1.08
ITGAV-202ENST00000374907 ZRSR1Q15695 479 aaKnown RBP21.8■■□□□ 1.08
ITGAV-202ENST00000374907 FKBP8Q14318 412 aa21.8■■□□□ 1.08
ITGAV-202ENST00000374907 NCLP19338 710 aaKnown RBP21.8■■□□□ 1.08
ITGAV-202ENST00000374907 ISY1Q9ULR0 285 aaKnown RBP21.78■■□□□ 1.08
ITGAV-202ENST00000374907 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
ITGAV-202ENST00000374907 CCDC136Q96JN2 1154 aa21.73■■□□□ 1.07
ITGAV-202ENST00000374907 DDX10Q13206 875 aaKnown RBP21.73■■□□□ 1.07
ITGAV-202ENST00000374907 NBR1Q14596 966 aa21.71■■□□□ 1.07
ITGAV-202ENST00000374907 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
ITGAV-202ENST00000374907 RGL3Q3MIN7 710 aa21.68■■□□□ 1.06
ITGAV-202ENST00000374907 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
ITGAV-202ENST00000374907 MLECQ14165 292 aa21.64■■□□□ 1.05
ITGAV-202ENST00000374907 OS9Q13438 667 aaPredicted RBP21.63■■□□□ 1.05
ITGAV-202ENST00000374907 CASC1Q6TDU7 716 aa21.61■■□□□ 1.05
ITGAV-202ENST00000374907 POGKQ9P215 609 aa21.61■■□□□ 1.05
ITGAV-202ENST00000374907 SOX12O15370 315 aa21.6■■□□□ 1.05
ITGAV-202ENST00000374907 PRM3Q9NNZ6 103 aa21.59■■□□□ 1.05
ITGAV-202ENST00000374907 MRS2Q9HD23 443 aa21.59■■□□□ 1.05
ITGAV-202ENST00000374907 SENP3-EIF4A1A0A087X0R7 540 aa21.58■■□□□ 1.05
ITGAV-202ENST00000374907 CFAP53Q96M91 514 aa21.58■■□□□ 1.05
ITGAV-202ENST00000374907 CCDC9Q9Y3X0 531 aaKnown RBP21.57■■□□□ 1.04
ITGAV-202ENST00000374907 FGD1P98174 961 aa21.57■■□□□ 1.04
ITGAV-202ENST00000374907 IRX6P78412 446 aaPredicted RBP21.55■■□□□ 1.04
ITGAV-202ENST00000374907 RRP7BPQ9NSQ0 103 aa21.54■■□□□ 1.04
ITGAV-202ENST00000374907 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
ITGAV-202ENST00000374907 MTUS2Q5JR59 1369 aa21.53■■□□□ 1.04
ITGAV-202ENST00000374907 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
ITGAV-202ENST00000374907 FTSJ3Q8IY81 847 aaKnown RBP21.52■■□□□ 1.04
ITGAV-202ENST00000374907 PTMAP06454 111 aaKnown RBP21.52■■□□□ 1.04
ITGAV-202ENST00000374907 TNNT2P45379 298 aaPredicted RBP21.51■■□□□ 1.03
ITGAV-202ENST00000374907 GLIPR1L2Q4G1C9 344 aa21.5■■□□□ 1.03
ITGAV-202ENST00000374907 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
ITGAV-202ENST00000374907 PLEKHD1A6NEE1 506 aa21.49■■□□□ 1.03
ITGAV-202ENST00000374907 TMX4Q9H1E5 349 aaPredicted RBP21.49■■□□□ 1.03
ITGAV-202ENST00000374907 MAPK8IP3Q9UPT6 1336 aa21.48■■□□□ 1.03
ITGAV-202ENST00000374907 KCNJ4P48050 445 aa21.47■■□□□ 1.03
ITGAV-202ENST00000374907 GOLGA6L22H0YM25 854 aa21.47■■□□□ 1.03
ITGAV-202ENST00000374907 TRIM44Q96DX7 344 aaPredicted RBP21.46■■□□□ 1.03
ITGAV-202ENST00000374907 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
ITGAV-202ENST00000374907 PLCB2Q00722 1185 aa21.45■■□□□ 1.02
ITGAV-202ENST00000374907 BECN1Q14457 450 aa21.44■■□□□ 1.02
ITGAV-202ENST00000374907 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
ITGAV-202ENST00000374907 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
ITGAV-202ENST00000374907 KNSTRNQ9Y448 316 aa21.41■■□□□ 1.02
ITGAV-202ENST00000374907 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
ITGAV-202ENST00000374907 AMER1Q5JTC6 1135 aaPredicted RBP21.4■■□□□ 1.02
ITGAV-202ENST00000374907 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
ITGAV-202ENST00000374907 G3V3G9 751 aa21.37■■□□□ 1.01
ITGAV-202ENST00000374907 DCAF8Q5TAQ9 597 aa21.37■■□□□ 1.01
ITGAV-202ENST00000374907 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
ITGAV-202ENST00000374907 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
ITGAV-202ENST00000374907 CSB-PGBD3P0DP91 1061 aa21.36■■□□□ 1.01
ITGAV-202ENST00000374907 KRI1Q8N9T8 703 aaKnown RBP21.35■■□□□ 1.01
ITGAV-202ENST00000374907 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
ITGAV-202ENST00000374907 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
ITGAV-202ENST00000374907 GOLGA6L6A8MZA4 724 aa21.29■■□□□ 1
ITGAV-202ENST00000374907 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
ITGAV-202ENST00000374907 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
ITGAV-202ENST00000374907 CDCA8Q53HL2 280 aa21.29■■□□□ 1
ITGAV-202ENST00000374907 HDGFP51858 240 aaKnown RBP21.26■□□□□ 0.99
ITGAV-202ENST00000374907 GNL2Q13823 731 aaKnown RBP21.26■□□□□ 0.99
ITGAV-202ENST00000374907 PDE4CQ08493 712 aa21.25■□□□□ 0.99
ITGAV-202ENST00000374907 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
ITGAV-202ENST00000374907 DDRGK1Q96HY6 314 aa21.24■□□□□ 0.99
ITGAV-202ENST00000374907 CFDP1Q9UEE9 299 aaPredicted RBP21.23■□□□□ 0.99
ITGAV-202ENST00000374907 SRPK2P78362 688 aaKnown RBP21.23■□□□□ 0.99
ITGAV-202ENST00000374907 ANO8Q9HCE9 1232 aaPredicted RBP21.2■□□□□ 0.99
ITGAV-202ENST00000374907 CARD11Q9BXL7 1154 aa21.2■□□□□ 0.98
ITGAV-202ENST00000374907 CC2D1BQ5T0F9 858 aaKnown RBP21.2■□□□□ 0.98
ITGAV-202ENST00000374907 RTF1Q92541 710 aaKnown RBP21.19■□□□□ 0.98
ITGAV-202ENST00000374907 GOLGA6L4A6NEF3 574 aa21.19■□□□□ 0.98
ITGAV-202ENST00000374907 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
ITGAV-202ENST00000374907 STK26Q9P289 416 aa21.18■□□□□ 0.98
ITGAV-202ENST00000374907 MSH5O43196 834 aa21.17■□□□□ 0.98
ITGAV-202ENST00000374907 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
ITGAV-202ENST00000374907 PNNQ9H307 717 aaKnown RBP21.15■□□□□ 0.98
ITGAV-202ENST00000374907 CHMP3Q9Y3E7 222 aa21.13■□□□□ 0.97
ITGAV-202ENST00000374907 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
ITGAV-202ENST00000374907 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
ITGAV-202ENST00000374907 RGS3P49796 1198 aa21.11■□□□□ 0.97
ITGAV-202ENST00000374907 NRDCO43847 1150 aa21.1■□□□□ 0.97
ITGAV-202ENST00000374907 ERICH6BQ5W0A0 696 aa21.1■□□□□ 0.97
ITGAV-202ENST00000374907 APBB1O00213 710 aa21.1■□□□□ 0.97
ITGAV-202ENST00000374907 KLHL34Q8N239 644 aa21.1■□□□□ 0.97
ITGAV-202ENST00000374907 NOC3LQ8WTT2 800 aaKnown RBP21.09■□□□□ 0.97
ITGAV-202ENST00000374907 VPS53Q5VIR6 699 aa21.09■□□□□ 0.97
ITGAV-202ENST00000374907 TAF7LQ5H9L4 462 aa21.09■□□□□ 0.97
ITGAV-202ENST00000374907 MEX3CQ5U5Q3 659 aaKnown RBP21.08■□□□□ 0.97
ITGAV-202ENST00000374907 DRC7Q8IY82 874 aa21.08■□□□□ 0.96
ITGAV-202ENST00000374907 GGT6Q6P531 493 aa21.07■□□□□ 0.96
ITGAV-202ENST00000374907 KANK1Q14678 1352 aa21.07■□□□□ 0.96
ITGAV-202ENST00000374907 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
ITGAV-202ENST00000374907 GORABQ5T7V8 394 aa21.06■□□□□ 0.96
ITGAV-202ENST00000374907 CHMP4BQ9H444 224 aaKnown RBP21.05■□□□□ 0.96
ITGAV-202ENST00000374907 GTF2E1P29083 439 aaPredicted RBP21.03■□□□□ 0.96
ITGAV-202ENST00000374907 MCCP23508 829 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms