RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
SLC44A1-202ENST00000374723 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
SLC44A1-202ENST00000374723 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
SLC44A1-202ENST00000374723 MRS2Q9HD23 443 aa17.21■□□□□ 0.35
SLC44A1-202ENST00000374723 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
SLC44A1-202ENST00000374723 BECN1Q14457 450 aa17.2■□□□□ 0.34
SLC44A1-202ENST00000374723 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
SLC44A1-202ENST00000374723 CASC1Q6TDU7 716 aa17.19■□□□□ 0.34
SLC44A1-202ENST00000374723 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
SLC44A1-202ENST00000374723 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
SLC44A1-202ENST00000374723 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
SLC44A1-202ENST00000374723 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
SLC44A1-202ENST00000374723 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
SLC44A1-202ENST00000374723 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
SLC44A1-202ENST00000374723 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
SLC44A1-202ENST00000374723 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
SLC44A1-202ENST00000374723 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
SLC44A1-202ENST00000374723 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
SLC44A1-202ENST00000374723 MTUS2Q5JR59 1369 aa17.11■□□□□ 0.33
SLC44A1-202ENST00000374723 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
SLC44A1-202ENST00000374723 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
SLC44A1-202ENST00000374723 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
SLC44A1-202ENST00000374723 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SLC44A1-202ENST00000374723 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
SLC44A1-202ENST00000374723 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
SLC44A1-202ENST00000374723 ANP32EQ9BTT0 268 aa17.06■□□□□ 0.32
SLC44A1-202ENST00000374723 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
SLC44A1-202ENST00000374723 CLSTN1O94985 981 aa17.04■□□□□ 0.32
SLC44A1-202ENST00000374723 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.31
SLC44A1-202ENST00000374723 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
SLC44A1-202ENST00000374723 FGD1P98174 961 aa17.01■□□□□ 0.31
SLC44A1-202ENST00000374723 OS9Q13438 667 aaPredicted RBP17.01■□□□□ 0.31
SLC44A1-202ENST00000374723 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
SLC44A1-202ENST00000374723 EIF4G2P78344 907 aaKnown RBP eCLIP17■□□□□ 0.31
SLC44A1-202ENST00000374723 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
SLC44A1-202ENST00000374723 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
SLC44A1-202ENST00000374723 GOLGA6L6A8MZA4 724 aa16.98■□□□□ 0.31
SLC44A1-202ENST00000374723 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
SLC44A1-202ENST00000374723 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
SLC44A1-202ENST00000374723 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
SLC44A1-202ENST00000374723 KCNJ4P48050 445 aa16.95■□□□□ 0.3
SLC44A1-202ENST00000374723 POGKQ9P215 609 aa16.94■□□□□ 0.3
SLC44A1-202ENST00000374723 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
SLC44A1-202ENST00000374723 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
SLC44A1-202ENST00000374723 PLEKHD1A6NEE1 506 aa16.91■□□□□ 0.3
SLC44A1-202ENST00000374723 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
SLC44A1-202ENST00000374723 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
SLC44A1-202ENST00000374723 NRDCO43847 1150 aa16.87■□□□□ 0.29
SLC44A1-202ENST00000374723 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
SLC44A1-202ENST00000374723 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
SLC44A1-202ENST00000374723 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
SLC44A1-202ENST00000374723 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.29
SLC44A1-202ENST00000374723 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
SLC44A1-202ENST00000374723 GOLGA6L4A6NEF3 574 aa16.82■□□□□ 0.28
SLC44A1-202ENST00000374723 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
SLC44A1-202ENST00000374723 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
SLC44A1-202ENST00000374723 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
SLC44A1-202ENST00000374723 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
SLC44A1-202ENST00000374723 SOX12O15370 315 aa16.79■□□□□ 0.28
SLC44A1-202ENST00000374723 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
SLC44A1-202ENST00000374723 RGS3P49796 1198 aa16.78■□□□□ 0.28
SLC44A1-202ENST00000374723 CFDP1Q9UEE9 299 aaPredicted RBP16.77■□□□□ 0.28
SLC44A1-202ENST00000374723 PRM3Q9NNZ6 103 aa16.77■□□□□ 0.28
SLC44A1-202ENST00000374723 MIER1Q8N108 512 aa16.75■□□□□ 0.27
SLC44A1-202ENST00000374723 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
SLC44A1-202ENST00000374723 MS4A1P11836 297 aa16.75■□□□□ 0.27
SLC44A1-202ENST00000374723 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
SLC44A1-202ENST00000374723 DRC7Q8IY82 874 aa16.75■□□□□ 0.27
SLC44A1-202ENST00000374723 KIAA2012Q0VF49 1180 aa16.74■□□□□ 0.27
SLC44A1-202ENST00000374723 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
SLC44A1-202ENST00000374723 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
SLC44A1-202ENST00000374723 CLIP1P30622 1438 aa16.73■□□□□ 0.27
SLC44A1-202ENST00000374723 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
SLC44A1-202ENST00000374723 MCCP23508 829 aa16.73■□□□□ 0.27
SLC44A1-202ENST00000374723 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
SLC44A1-202ENST00000374723 ERCC6Q03468 1493 aa16.71■□□□□ 0.27
SLC44A1-202ENST00000374723 MLECQ14165 292 aa16.71■□□□□ 0.27
SLC44A1-202ENST00000374723 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
SLC44A1-202ENST00000374723 SUPT16HQ9Y5B9 1047 aaKnown RBP16.7■□□□□ 0.26
SLC44A1-202ENST00000374723 NOC3LQ8WTT2 800 aaKnown RBP16.69■□□□□ 0.26
SLC44A1-202ENST00000374723 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
SLC44A1-202ENST00000374723 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
SLC44A1-202ENST00000374723 SRPK2P78362 688 aaKnown RBP16.68■□□□□ 0.26
SLC44A1-202ENST00000374723 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
SLC44A1-202ENST00000374723 KANK1Q14678 1352 aa16.67■□□□□ 0.26
SLC44A1-202ENST00000374723 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
SLC44A1-202ENST00000374723 PAK3O75914 559 aaPredicted RBP16.64■□□□□ 0.25
SLC44A1-202ENST00000374723 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
SLC44A1-202ENST00000374723 MSNP26038 577 aaKnown RBP16.62■□□□□ 0.25
SLC44A1-202ENST00000374723 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
SLC44A1-202ENST00000374723 CSB-PGBD3P0DP91 1061 aa16.6■□□□□ 0.25
SLC44A1-202ENST00000374723 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
SLC44A1-202ENST00000374723 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
SLC44A1-202ENST00000374723 G3V3G9 751 aa16.6■□□□□ 0.25
SLC44A1-202ENST00000374723 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
SLC44A1-202ENST00000374723 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
SLC44A1-202ENST00000374723 TMF1P82094 1093 aa16.59■□□□□ 0.25
SLC44A1-202ENST00000374723 APBB1O00213 710 aa16.58■□□□□ 0.24
SLC44A1-202ENST00000374723 CFAP44Q96MT7 982 aa16.57■□□□□ 0.24
SLC44A1-202ENST00000374723 MORC1Q86VD1 984 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms