RNA–Protein interactions for RNA: ENST00000373798.5

EPB41-206, Transcript of erythrocyte membrane protein band 4.1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EPB41, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-206ENST00000373798 CHGAP10645 457 aaKnown RBP12.28□□□□□ -0.44
EPB41-206ENST00000373798 CLIP1P30622 1438 aa12.27□□□□□ -0.44
EPB41-206ENST00000373798 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.45
EPB41-206ENST00000373798 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
EPB41-206ENST00000373798 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
EPB41-206ENST00000373798 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
EPB41-206ENST00000373798 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
EPB41-206ENST00000373798 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
EPB41-206ENST00000373798 PPP4R2Q9NY27 417 aa12.23□□□□□ -0.45
EPB41-206ENST00000373798 MTUS2Q5JR59 1369 aa12.23□□□□□ -0.45
EPB41-206ENST00000373798 WDR43Q15061 677 aaKnown RBP eCLIP12.22□□□□□ -0.45
EPB41-206ENST00000373798 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
EPB41-206ENST00000373798 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
EPB41-206ENST00000373798 EEA1Q15075 1411 aa12.21□□□□□ -0.45
EPB41-206ENST00000373798 GOLGA6L22H0YM25 854 aa12.21□□□□□ -0.46
EPB41-206ENST00000373798 ARXQ96QS3 562 aa12.2□□□□□ -0.46
EPB41-206ENST00000373798 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
EPB41-206ENST00000373798 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
EPB41-206ENST00000373798 RRP7BPQ9NSQ0 103 aa12.2□□□□□ -0.46
EPB41-206ENST00000373798 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
EPB41-206ENST00000373798 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.464e-7■■□□□ 13.3
EPB41-206ENST00000373798 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
EPB41-206ENST00000373798 NAP1L5Q96NT1 182 aaPredicted RBP12.16□□□□□ -0.46
EPB41-206ENST00000373798 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
EPB41-206ENST00000373798 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
EPB41-206ENST00000373798 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
EPB41-206ENST00000373798 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
EPB41-206ENST00000373798 SOGA1O94964 1423 aa12.15□□□□□ -0.46
EPB41-206ENST00000373798 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
EPB41-206ENST00000373798 SALL2Q9Y467 1007 aaPredicted RBP12.14□□□□□ -0.47
EPB41-206ENST00000373798 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
EPB41-206ENST00000373798 TSPY4P0CV99 314 aa12.13□□□□□ -0.47
EPB41-206ENST00000373798 TSPY10P0CW01 314 aa12.13□□□□□ -0.47
EPB41-206ENST00000373798 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
EPB41-206ENST00000373798 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
EPB41-206ENST00000373798 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
EPB41-206ENST00000373798 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
EPB41-206ENST00000373798 RBM19Q9Y4C8 960 aaKnown RBP12.09□□□□□ -0.47
EPB41-206ENST00000373798 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
EPB41-206ENST00000373798 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
EPB41-206ENST00000373798 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.48
EPB41-206ENST00000373798 LAS1LQ9Y4W2 734 aaKnown RBP12.08□□□□□ -0.48
EPB41-206ENST00000373798 CCER2I3L3R5 266 aa12.07□□□□□ -0.48
EPB41-206ENST00000373798 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
EPB41-206ENST00000373798 CUX2O14529 1486 aa12.06□□□□□ -0.48
EPB41-206ENST00000373798 WIZO95785 1651 aa12.06□□□□□ -0.48
EPB41-206ENST00000373798 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
EPB41-206ENST00000373798 DNTTIP2Q5QJE6 756 aaKnown RBP12.04□□□□□ -0.48
EPB41-206ENST00000373798 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
EPB41-206ENST00000373798 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
EPB41-206ENST00000373798 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.48
EPB41-206ENST00000373798 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
EPB41-206ENST00000373798 CARMIL1Q5VZK9 1371 aa12.01□□□□□ -0.49
EPB41-206ENST00000373798 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
EPB41-206ENST00000373798 SENP3-EIF4A1A0A087X0R7 540 aa12.01□□□□□ -0.49
EPB41-206ENST00000373798 PLEKHG5O94827 1062 aa12□□□□□ -0.49
EPB41-206ENST00000373798 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
EPB41-206ENST00000373798 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
EPB41-206ENST00000373798 PTMSP20962 102 aa11.99□□□□□ -0.49
EPB41-206ENST00000373798 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
EPB41-206ENST00000373798 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
EPB41-206ENST00000373798 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.49
EPB41-206ENST00000373798 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
EPB41-206ENST00000373798 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
EPB41-206ENST00000373798 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
EPB41-206ENST00000373798 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
EPB41-206ENST00000373798 KANK4Q5T7N3 995 aaPredicted RBP11.94□□□□□ -0.5
EPB41-206ENST00000373798 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
EPB41-206ENST00000373798 CHAF1AQ13111 956 aaPredicted RBP11.93□□□□□ -0.5
EPB41-206ENST00000373798 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
EPB41-206ENST00000373798 MS4A1P11836 297 aa11.93□□□□□ -0.5
EPB41-206ENST00000373798 ARID4BQ4LE39 1312 aaPredicted RBP11.92□□□□□ -0.5
EPB41-206ENST00000373798 ZRSR1Q15695 479 aaKnown RBP11.92□□□□□ -0.5
EPB41-206ENST00000373798 HSCBQ8IWL3 235 aa11.92□□□□□ -0.5
EPB41-206ENST00000373798 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
EPB41-206ENST00000373798 CFAP53Q96M91 514 aa11.92□□□□□ -0.5
EPB41-206ENST00000373798 TCERG1O14776 1098 aaKnown RBP11.9□□□□□ -0.5
EPB41-206ENST00000373798 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
EPB41-206ENST00000373798 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
EPB41-206ENST00000373798 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
EPB41-206ENST00000373798 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
EPB41-206ENST00000373798 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
EPB41-206ENST00000373798 RGS3P49796 1198 aa11.88□□□□□ -0.51
EPB41-206ENST00000373798 PDS5BQ9NTI5 1447 aa11.87□□□□□ -0.51
EPB41-206ENST00000373798 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
EPB41-206ENST00000373798 PPP1R15AO75807 674 aaPredicted RBP11.87□□□□□ -0.51
EPB41-206ENST00000373798 USP35Q9P2H5 1018 aa11.87□□□□□ -0.51
EPB41-206ENST00000373798 CCNB3Q8WWL7 1395 aa11.87□□□□□ -0.51
EPB41-206ENST00000373798 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
EPB41-206ENST00000373798 NRDCO43847 1150 aa11.85□□□□□ -0.51
EPB41-206ENST00000373798 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
EPB41-206ENST00000373798 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
EPB41-206ENST00000373798 FOXD1Q16676 465 aa11.84□□□□□ -0.51
EPB41-206ENST00000373798 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
EPB41-206ENST00000373798 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
EPB41-206ENST00000373798 MLECQ14165 292 aa11.84□□□□□ -0.51
EPB41-206ENST00000373798 GBP4Q96PP9 640 aa11.83□□□□□ -0.52
EPB41-206ENST00000373798 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
EPB41-206ENST00000373798 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
EPB41-206ENST00000373798 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms