RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 NPM1P06748 294 aaKnown RBP eCLIP26.64■■□□□ 1.86
CDKN1A-202ENST00000373711 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
CDKN1A-202ENST00000373711 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
CDKN1A-202ENST00000373711 ABCC10Q5T3U5 1492 aa26.62■■□□□ 1.85
CDKN1A-202ENST00000373711 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
CDKN1A-202ENST00000373711 DIP2BQ9P265 1576 aa26.57■■□□□ 1.84
CDKN1A-202ENST00000373711 ADCY10Q96PN6 1610 aa26.52■■□□□ 1.84
CDKN1A-202ENST00000373711 KDM6BO15054 1643 aa26.51■■□□□ 1.83
CDKN1A-202ENST00000373711 TSPOAP1O95153 1857 aa26.44■■□□□ 1.82
CDKN1A-202ENST00000373711 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
CDKN1A-202ENST00000373711 CUL7Q14999 1698 aa26.42■■□□□ 1.82
CDKN1A-202ENST00000373711 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
CDKN1A-202ENST00000373711 KDM4FA0A1W2PPD8 638 aa26.27■■□□□ 1.8
CDKN1A-202ENST00000373711 PTPRGP23470 1445 aa26.26■■□□□ 1.79
CDKN1A-202ENST00000373711 IGF1RP08069 1367 aa26.25■■□□□ 1.79
CDKN1A-202ENST00000373711 CARMIL2Q6F5E8 1435 aa26.24■■□□□ 1.79
CDKN1A-202ENST00000373711 ABCC2Q92887 1545 aa26.22■■□□□ 1.79
CDKN1A-202ENST00000373711 GLI2P10070 1586 aa26.2■■□□□ 1.78
CDKN1A-202ENST00000373711 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
CDKN1A-202ENST00000373711 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
CDKN1A-202ENST00000373711 IQGAP2Q13576 1575 aa26.15■■□□□ 1.78
CDKN1A-202ENST00000373711 PPRC1Q5VV67 1664 aaKnown RBP26.15■■□□□ 1.78
CDKN1A-202ENST00000373711 ASXL2Q76L83 1435 aa26.14■■□□□ 1.78
CDKN1A-202ENST00000373711 UHRF1BP1LA0JNW5 1464 aa26.12■■□□□ 1.77
CDKN1A-202ENST00000373711 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
CDKN1A-202ENST00000373711 TTBK1Q5TCY1 1321 aaPredicted RBP26.11■■□□□ 1.77
CDKN1A-202ENST00000373711 ADGRL1O94910 1474 aa26.07■■□□□ 1.76
CDKN1A-202ENST00000373711 UACAQ9BZF9 1416 aa26.05■■□□□ 1.76
CDKN1A-202ENST00000373711 TEX14Q8IWB6 1497 aa26.05■■□□□ 1.76
CDKN1A-202ENST00000373711 MAP3K4Q9Y6R4 1608 aa26.03■■□□□ 1.76
CDKN1A-202ENST00000373711 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
CDKN1A-202ENST00000373711 EPRSP07814 1512 aaKnown RBP25.99■■□□□ 1.75
CDKN1A-202ENST00000373711 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
CDKN1A-202ENST00000373711 DISP1Q96F81 1524 aa25.97■■□□□ 1.75
CDKN1A-202ENST00000373711 ZCCHC11Q5TAX3 1644 aaKnown RBP25.96■■□□□ 1.75
CDKN1A-202ENST00000373711 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
CDKN1A-202ENST00000373711 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
CDKN1A-202ENST00000373711 COL17A1Q9UMD9 1497 aaPredicted RBP25.89■■□□□ 1.73
CDKN1A-202ENST00000373711 HECW2Q9P2P5 1572 aa25.89■■□□□ 1.73
CDKN1A-202ENST00000373711 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
CDKN1A-202ENST00000373711 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
CDKN1A-202ENST00000373711 CFAP43Q8NDM7 1665 aa25.82■■□□□ 1.72
CDKN1A-202ENST00000373711 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
CDKN1A-202ENST00000373711 MAGI3Q5TCQ9 1506 aa25.75■■□□□ 1.71
CDKN1A-202ENST00000373711 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
CDKN1A-202ENST00000373711 CD109Q6YHK3 1445 aa25.72■■□□□ 1.71
CDKN1A-202ENST00000373711 ABCA8O94911 1581 aa25.66■■□□□ 1.7
CDKN1A-202ENST00000373711 KIF21BO75037 1637 aa25.63■■□□□ 1.69
CDKN1A-202ENST00000373711 FAM9AQ8IZU1 332 aaPredicted RBP25.61■■□□□ 1.69
CDKN1A-202ENST00000373711 KCNH8Q96L42 1107 aa25.61■■□□□ 1.69
CDKN1A-202ENST00000373711 ARAP3Q8WWN8 1544 aa25.56■■□□□ 1.68
CDKN1A-202ENST00000373711 PHLDB1Q86UU1 1377 aa25.51■■□□□ 1.67
CDKN1A-202ENST00000373711 ABCA9Q8IUA7 1624 aa25.47■■□□□ 1.67
CDKN1A-202ENST00000373711 FBXO41Q8TF61 875 aa25.46■■□□□ 1.67
CDKN1A-202ENST00000373711 ADAMTSL3P82987 1691 aa25.45■■□□□ 1.67
CDKN1A-202ENST00000373711 PRXQ9BXM0 1461 aa25.43■■□□□ 1.66
CDKN1A-202ENST00000373711 PTPRMP28827 1452 aa25.41■■□□□ 1.66
CDKN1A-202ENST00000373711 ATP10BO94823 1461 aa25.4■■□□□ 1.66
CDKN1A-202ENST00000373711 NEO1Q92859 1461 aa25.4■■□□□ 1.66
CDKN1A-202ENST00000373711 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
CDKN1A-202ENST00000373711 RAPGEF6Q8TEU7 1601 aa25.34■■□□□ 1.65
CDKN1A-202ENST00000373711 ARID3CA6NKF2 412 aa25.33■■□□□ 1.65
CDKN1A-202ENST00000373711 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
CDKN1A-202ENST00000373711 SAMD9Q5K651 1589 aa25.31■■□□□ 1.64
CDKN1A-202ENST00000373711 MADDQ8WXG6 1647 aa25.3■■□□□ 1.64
CDKN1A-202ENST00000373711 FRMPD1Q5SYB0 1578 aa25.28■■□□□ 1.64
CDKN1A-202ENST00000373711 RAPGEF3O95398 923 aa25.28■■□□□ 1.64
CDKN1A-202ENST00000373711 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
CDKN1A-202ENST00000373711 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
CDKN1A-202ENST00000373711 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
CDKN1A-202ENST00000373711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.26■■□□□ 1.63
CDKN1A-202ENST00000373711 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
CDKN1A-202ENST00000373711 CFAP74Q9C0B2 1584 aa25.26■■□□□ 1.63
CDKN1A-202ENST00000373711 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
CDKN1A-202ENST00000373711 LMTK3Q96Q04 1460 aa25.22■■□□□ 1.63
CDKN1A-202ENST00000373711 RICTORQ6R327 1708 aa25.2■■□□□ 1.63
CDKN1A-202ENST00000373711 DENND4BO75064 1496 aaPredicted RBP25.19■■□□□ 1.62
CDKN1A-202ENST00000373711 POGZQ7Z3K3 1410 aa25.18■■□□□ 1.62
CDKN1A-202ENST00000373711 NUP153P49790 1475 aaKnown RBP25.16■■□□□ 1.62
CDKN1A-202ENST00000373711 FANCAO15360 1455 aa25.15■■□□□ 1.62
CDKN1A-202ENST00000373711 FHOD3Q2V2M9 1422 aa25.12■■□□□ 1.61
CDKN1A-202ENST00000373711 AKNAQ7Z591 1439 aa25.12■■□□□ 1.61
CDKN1A-202ENST00000373711 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
CDKN1A-202ENST00000373711 ZMYM4Q5VZL5 1548 aa25.12■■□□□ 1.61
CDKN1A-202ENST00000373711 PLEKHD1A6NEE1 506 aa25.11■■□□□ 1.61
CDKN1A-202ENST00000373711 ZFYVE16Q7Z3T8 1539 aa25.09■■□□□ 1.61
CDKN1A-202ENST00000373711 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
CDKN1A-202ENST00000373711 FER1L4A9Z1Z3 1794 aa25.07■■□□□ 1.6
CDKN1A-202ENST00000373711 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
CDKN1A-202ENST00000373711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.06■■□□□ 1.6
CDKN1A-202ENST00000373711 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
CDKN1A-202ENST00000373711 EEA1Q15075 1411 aa25.03■■□□□ 1.6
CDKN1A-202ENST00000373711 HSPA2P54652 639 aa24.98■■□□□ 1.59
CDKN1A-202ENST00000373711 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
CDKN1A-202ENST00000373711 HECW1Q76N89 1606 aa24.97■■□□□ 1.59
CDKN1A-202ENST00000373711 SIGLEC1Q9BZZ2 1709 aa24.97■■□□□ 1.59
CDKN1A-202ENST00000373711 RANGAP1P46060 587 aaPredicted RBP24.96■■□□□ 1.59
CDKN1A-202ENST00000373711 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.59
CDKN1A-202ENST00000373711 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
CDKN1A-202ENST00000373711 CERKQ8TCT0 537 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms