RNA–Protein interactions for RNA: ENST00000373603.5

NEK6-204, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-204ENST00000373603 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
NEK6-204ENST00000373603 RRBP1Q9P2E9 1410 aaKnown RBP13.21□□□□□ -0.29
NEK6-204ENST00000373603 KIF27Q86VH2 1401 aa13.21□□□□□ -0.29
NEK6-204ENST00000373603 ARHGAP35Q9NRY4 1499 aa13.19□□□□□ -0.3
NEK6-204ENST00000373603 CUX1P39880 1505 aa13.17□□□□□ -0.3
NEK6-204ENST00000373603 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
NEK6-204ENST00000373603 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
NEK6-204ENST00000373603 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
NEK6-204ENST00000373603 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
NEK6-204ENST00000373603 SETD5Q9C0A6 1442 aa13.11□□□□□ -0.31
NEK6-204ENST00000373603 MAPKBP1O60336 1514 aa13.11□□□□□ -0.31
NEK6-204ENST00000373603 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
NEK6-204ENST00000373603 CUX2O14529 1486 aa13.11□□□□□ -0.31
NEK6-204ENST00000373603 NEFLP07196 543 aa13.1□□□□□ -0.31
NEK6-204ENST00000373603 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
NEK6-204ENST00000373603 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
NEK6-204ENST00000373603 IGF1RP08069 1367 aa13.09□□□□□ -0.31
NEK6-204ENST00000373603 ANP32CO43423 234 aa13.07□□□□□ -0.32
NEK6-204ENST00000373603 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
NEK6-204ENST00000373603 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
NEK6-204ENST00000373603 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
NEK6-204ENST00000373603 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
NEK6-204ENST00000373603 LRRC9Q6ZRR7 1453 aa13.03□□□□□ -0.32
NEK6-204ENST00000373603 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.32
NEK6-204ENST00000373603 TIAM1Q13009 1591 aa13.01□□□□□ -0.33
NEK6-204ENST00000373603 PKNOX2Q96KN3 472 aa13.01□□□□□ -0.33
NEK6-204ENST00000373603 CFTRP13569 1480 aa13□□□□□ -0.33
NEK6-204ENST00000373603 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
NEK6-204ENST00000373603 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
NEK6-204ENST00000373603 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
NEK6-204ENST00000373603 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEK6-204ENST00000373603 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
NEK6-204ENST00000373603 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
NEK6-204ENST00000373603 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
NEK6-204ENST00000373603 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
NEK6-204ENST00000373603 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
NEK6-204ENST00000373603 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
NEK6-204ENST00000373603 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
NEK6-204ENST00000373603 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
NEK6-204ENST00000373603 RRP7BPQ9NSQ0 103 aa12.91□□□□□ -0.34
NEK6-204ENST00000373603 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
NEK6-204ENST00000373603 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
NEK6-204ENST00000373603 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
NEK6-204ENST00000373603 CADPSQ9ULU8 1353 aa12.89□□□□□ -0.35
NEK6-204ENST00000373603 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
NEK6-204ENST00000373603 MSH5O43196 834 aa12.87□□□□□ -0.35
NEK6-204ENST00000373603 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
NEK6-204ENST00000373603 FOXD1Q16676 465 aa12.86□□□□□ -0.35
NEK6-204ENST00000373603 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
NEK6-204ENST00000373603 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
NEK6-204ENST00000373603 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
NEK6-204ENST00000373603 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
NEK6-204ENST00000373603 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
NEK6-204ENST00000373603 HSPA5P11021 654 aaKnown RBP12.85□□□□□ -0.35
NEK6-204ENST00000373603 FGD6Q6ZV73 1430 aa12.84□□□□□ -0.35
NEK6-204ENST00000373603 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
NEK6-204ENST00000373603 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
NEK6-204ENST00000373603 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■□□□□ 10.1
NEK6-204ENST00000373603 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
NEK6-204ENST00000373603 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
NEK6-204ENST00000373603 B4GALNT3Q6L9W6 998 aa12.79□□□□□ -0.36
NEK6-204ENST00000373603 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
NEK6-204ENST00000373603 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
NEK6-204ENST00000373603 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
NEK6-204ENST00000373603 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
NEK6-204ENST00000373603 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.36
NEK6-204ENST00000373603 DEKP35659 375 aaKnown RBP12.77□□□□□ -0.36
NEK6-204ENST00000373603 EIF4G2P78344 907 aaKnown RBP eCLIP12.77□□□□□ -0.368e-7■■■■■ 28.7
NEK6-204ENST00000373603 MRS2Q9HD23 443 aa12.77□□□□□ -0.37
NEK6-204ENST00000373603 CFAP43Q8NDM7 1665 aa12.77□□□□□ -0.37
NEK6-204ENST00000373603 NAIPQ13075 1403 aa12.77□□□□□ -0.37
NEK6-204ENST00000373603 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
NEK6-204ENST00000373603 HFM1A2PYH4 1435 aa12.76□□□□□ -0.37
NEK6-204ENST00000373603 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
NEK6-204ENST00000373603 FMN1Q68DA7 1419 aa12.75□□□□□ -0.37
NEK6-204ENST00000373603 NESP48681 1621 aa12.74□□□□□ -0.37
NEK6-204ENST00000373603 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
NEK6-204ENST00000373603 NCOA2Q15596 1464 aa12.73□□□□□ -0.37
NEK6-204ENST00000373603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.371e-7■■■■■ 59.4
NEK6-204ENST00000373603 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
NEK6-204ENST00000373603 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
NEK6-204ENST00000373603 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.37
NEK6-204ENST00000373603 MPHOSPH9Q99550 1183 aa12.71□□□□□ -0.37
NEK6-204ENST00000373603 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
NEK6-204ENST00000373603 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
NEK6-204ENST00000373603 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
NEK6-204ENST00000373603 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
NEK6-204ENST00000373603 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
NEK6-204ENST00000373603 ERICH6BQ5W0A0 696 aa12.68□□□□□ -0.38
NEK6-204ENST00000373603 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
NEK6-204ENST00000373603 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
NEK6-204ENST00000373603 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
NEK6-204ENST00000373603 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
NEK6-204ENST00000373603 NBR1Q14596 966 aa12.65□□□□□ -0.38
NEK6-204ENST00000373603 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
NEK6-204ENST00000373603 CNTLNQ9NXG0 1405 aa12.64□□□□□ -0.39
NEK6-204ENST00000373603 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
NEK6-204ENST00000373603 ZNF644Q9H582 1327 aaPredicted RBP12.64□□□□□ -0.39
NEK6-204ENST00000373603 CCDC7Q96M83 1385 aa12.64□□□□□ -0.39
NEK6-204ENST00000373603 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms