RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
HDLBP-202ENST00000373292 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.36
HDLBP-202ENST00000373292 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
HDLBP-202ENST00000373292 FHOD3Q2V2M9 1422 aa17.27■□□□□ 0.35
HDLBP-202ENST00000373292 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
HDLBP-202ENST00000373292 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
HDLBP-202ENST00000373292 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
HDLBP-202ENST00000373292 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
HDLBP-202ENST00000373292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-202ENST00000373292 APLP2Q06481 763 aa17.16■□□□□ 0.34
HDLBP-202ENST00000373292 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
HDLBP-202ENST00000373292 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-202ENST00000373292 FBLN2P98095 1184 aa17.13■□□□□ 0.33
HDLBP-202ENST00000373292 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
HDLBP-202ENST00000373292 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
HDLBP-202ENST00000373292 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
HDLBP-202ENST00000373292 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
HDLBP-202ENST00000373292 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
HDLBP-202ENST00000373292 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
HDLBP-202ENST00000373292 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
HDLBP-202ENST00000373292 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
HDLBP-202ENST00000373292 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
HDLBP-202ENST00000373292 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
HDLBP-202ENST00000373292 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.31
HDLBP-202ENST00000373292 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
HDLBP-202ENST00000373292 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
HDLBP-202ENST00000373292 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
HDLBP-202ENST00000373292 DISP1Q96F81 1524 aa17■□□□□ 0.31
HDLBP-202ENST00000373292 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
HDLBP-202ENST00000373292 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
HDLBP-202ENST00000373292 KIAA0586Q9BVV6 1533 aa16.98■□□□□ 0.31
HDLBP-202ENST00000373292 FYCO1Q9BQS8 1478 aa16.98■□□□□ 0.31
HDLBP-202ENST00000373292 FMN1Q68DA7 1419 aa16.96■□□□□ 0.31
HDLBP-202ENST00000373292 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
HDLBP-202ENST00000373292 ITGAEP38570 1179 aa16.95■□□□□ 0.3
HDLBP-202ENST00000373292 MAGI3Q5TCQ9 1506 aa16.95■□□□□ 0.3
HDLBP-202ENST00000373292 MAP3K1Q13233 1512 aa16.94■□□□□ 0.3
HDLBP-202ENST00000373292 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-202ENST00000373292 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
HDLBP-202ENST00000373292 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
HDLBP-202ENST00000373292 NUP160Q12769 1436 aa16.92■□□□□ 0.3
HDLBP-202ENST00000373292 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
HDLBP-202ENST00000373292 CHD1O14646 1710 aa16.91■□□□□ 0.3
HDLBP-202ENST00000373292 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
HDLBP-202ENST00000373292 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
HDLBP-202ENST00000373292 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
HDLBP-202ENST00000373292 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.29
HDLBP-202ENST00000373292 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
HDLBP-202ENST00000373292 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
HDLBP-202ENST00000373292 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
HDLBP-202ENST00000373292 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
HDLBP-202ENST00000373292 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
HDLBP-202ENST00000373292 HECW1Q76N89 1606 aa16.78■□□□□ 0.28
HDLBP-202ENST00000373292 RAPGEF6Q8TEU7 1601 aa16.76■□□□□ 0.27
HDLBP-202ENST00000373292 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
HDLBP-202ENST00000373292 PTPRKQ15262 1439 aa16.74■□□□□ 0.27
HDLBP-202ENST00000373292 FGD6Q6ZV73 1430 aa16.73■□□□□ 0.27
HDLBP-202ENST00000373292 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-202ENST00000373292 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
HDLBP-202ENST00000373292 CCDC18Q5T9S5 1454 aa16.71■□□□□ 0.27
HDLBP-202ENST00000373292 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
HDLBP-202ENST00000373292 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
HDLBP-202ENST00000373292 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
HDLBP-202ENST00000373292 CARMIL2Q6F5E8 1435 aa16.69■□□□□ 0.26
HDLBP-202ENST00000373292 MYOM3Q5VTT5 1437 aa16.68■□□□□ 0.26
HDLBP-202ENST00000373292 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
HDLBP-202ENST00000373292 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-202ENST00000373292 SHROOM2Q13796 1616 aa16.66■□□□□ 0.26
HDLBP-202ENST00000373292 ABCA8O94911 1581 aa16.65■□□□□ 0.26
HDLBP-202ENST00000373292 KIF14Q15058 1648 aa16.64■□□□□ 0.26
HDLBP-202ENST00000373292 ATP10BO94823 1461 aa16.63■□□□□ 0.25
HDLBP-202ENST00000373292 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
HDLBP-202ENST00000373292 PTPRGP23470 1445 aa16.62■□□□□ 0.25
HDLBP-202ENST00000373292 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
HDLBP-202ENST00000373292 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
HDLBP-202ENST00000373292 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.25
HDLBP-202ENST00000373292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDLBP-202ENST00000373292 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
HDLBP-202ENST00000373292 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
HDLBP-202ENST00000373292 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
HDLBP-202ENST00000373292 KDM6BO15054 1643 aa16.54■□□□□ 0.24
HDLBP-202ENST00000373292 TCOF1Q13428 1488 aaKnown RBP16.53■□□□□ 0.24
HDLBP-202ENST00000373292 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
HDLBP-202ENST00000373292 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
HDLBP-202ENST00000373292 NAIPQ13075 1403 aa16.5■□□□□ 0.23
HDLBP-202ENST00000373292 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-202ENST00000373292 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-202ENST00000373292 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
HDLBP-202ENST00000373292 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
HDLBP-202ENST00000373292 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
HDLBP-202ENST00000373292 ADCY10Q96PN6 1610 aa16.47■□□□□ 0.23
HDLBP-202ENST00000373292 ABCC10Q5T3U5 1492 aa16.47■□□□□ 0.23
HDLBP-202ENST00000373292 MIA2Q96PC5 1412 aa16.47■□□□□ 0.23
HDLBP-202ENST00000373292 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
HDLBP-202ENST00000373292 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.23
HDLBP-202ENST00000373292 ABCC5O15440 1437 aa16.46■□□□□ 0.23
HDLBP-202ENST00000373292 ABCC2Q92887 1545 aa16.44■□□□□ 0.22
HDLBP-202ENST00000373292 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
HDLBP-202ENST00000373292 DAPK1P53355 1430 aa16.43■□□□□ 0.22
HDLBP-202ENST00000373292 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms