RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 KIF21BO75037 1637 aa18.96■□□□□ 0.63
NCDN-203ENST00000373253 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
NCDN-203ENST00000373253 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
NCDN-203ENST00000373253 CCNB3Q8WWL7 1395 aa18.95■□□□□ 0.62
NCDN-203ENST00000373253 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
NCDN-203ENST00000373253 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
NCDN-203ENST00000373253 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
NCDN-203ENST00000373253 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
NCDN-203ENST00000373253 MYT1Q01538 1121 aa18.86■□□□□ 0.61
NCDN-203ENST00000373253 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
NCDN-203ENST00000373253 BCANQ96GW7 911 aa18.84■□□□□ 0.61
NCDN-203ENST00000373253 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.6
NCDN-203ENST00000373253 HMGXB3Q12766 1538 aa18.82■□□□□ 0.6
NCDN-203ENST00000373253 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
NCDN-203ENST00000373253 FOXD1Q16676 465 aa18.8■□□□□ 0.6
NCDN-203ENST00000373253 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
NCDN-203ENST00000373253 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
NCDN-203ENST00000373253 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
NCDN-203ENST00000373253 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
NCDN-203ENST00000373253 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.598e-7■■■■■ 33.1
NCDN-203ENST00000373253 TONSLQ96HA7 1378 aa18.73■□□□□ 0.59
NCDN-203ENST00000373253 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
NCDN-203ENST00000373253 PHLDB1Q86UU1 1377 aa18.72■□□□□ 0.59
NCDN-203ENST00000373253 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
NCDN-203ENST00000373253 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
NCDN-203ENST00000373253 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
NCDN-203ENST00000373253 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
NCDN-203ENST00000373253 CDK11AQ9UQ88 783 aaPredicted RBP18.64■□□□□ 0.57
NCDN-203ENST00000373253 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
NCDN-203ENST00000373253 ANP32CO43423 234 aa18.63■□□□□ 0.57
NCDN-203ENST00000373253 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
NCDN-203ENST00000373253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
NCDN-203ENST00000373253 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
NCDN-203ENST00000373253 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
NCDN-203ENST00000373253 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
NCDN-203ENST00000373253 CFDP1Q9UEE9 299 aaPredicted RBP18.58■□□□□ 0.56
NCDN-203ENST00000373253 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
NCDN-203ENST00000373253 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
NCDN-203ENST00000373253 NEFLP07196 543 aa18.55■□□□□ 0.56
NCDN-203ENST00000373253 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
NCDN-203ENST00000373253 FMN1Q68DA7 1419 aa18.52■□□□□ 0.56
NCDN-203ENST00000373253 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
NCDN-203ENST00000373253 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
NCDN-203ENST00000373253 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
NCDN-203ENST00000373253 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
NCDN-203ENST00000373253 FAM9BQ8IZU0 186 aa18.47■□□□□ 0.55
NCDN-203ENST00000373253 RGL3Q3MIN7 710 aa18.46■□□□□ 0.55
NCDN-203ENST00000373253 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
NCDN-203ENST00000373253 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
NCDN-203ENST00000373253 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
NCDN-203ENST00000373253 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
NCDN-203ENST00000373253 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
NCDN-203ENST00000373253 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
NCDN-203ENST00000373253 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
NCDN-203ENST00000373253 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
NCDN-203ENST00000373253 FKBP8Q14318 412 aa18.43■□□□□ 0.54
NCDN-203ENST00000373253 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
NCDN-203ENST00000373253 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.54
NCDN-203ENST00000373253 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
NCDN-203ENST00000373253 TIAM1Q13009 1591 aa18.37■□□□□ 0.53
NCDN-203ENST00000373253 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
NCDN-203ENST00000373253 FGD6Q6ZV73 1430 aa18.37■□□□□ 0.53
NCDN-203ENST00000373253 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
NCDN-203ENST00000373253 HNRNPMP52272 730 aaKnown RBP eCLIP18.36■□□□□ 0.53
NCDN-203ENST00000373253 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
NCDN-203ENST00000373253 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
NCDN-203ENST00000373253 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
NCDN-203ENST00000373253 HSPA5P11021 654 aaKnown RBP18.33■□□□□ 0.52
NCDN-203ENST00000373253 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
NCDN-203ENST00000373253 PKD2Q13563 968 aa18.3■□□□□ 0.52
NCDN-203ENST00000373253 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
NCDN-203ENST00000373253 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
NCDN-203ENST00000373253 MRS2Q9HD23 443 aa18.27■□□□□ 0.52
NCDN-203ENST00000373253 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
NCDN-203ENST00000373253 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
NCDN-203ENST00000373253 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
NCDN-203ENST00000373253 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
NCDN-203ENST00000373253 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
NCDN-203ENST00000373253 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
NCDN-203ENST00000373253 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
NCDN-203ENST00000373253 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
NCDN-203ENST00000373253 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
NCDN-203ENST00000373253 PTPRKQ15262 1439 aa18.21■□□□□ 0.51
NCDN-203ENST00000373253 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
NCDN-203ENST00000373253 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
NCDN-203ENST00000373253 WDR97A6NE52 1622 aa18.19■□□□□ 0.5
NCDN-203ENST00000373253 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
NCDN-203ENST00000373253 NUP155O75694 1391 aa18.16■□□□□ 0.5
NCDN-203ENST00000373253 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
NCDN-203ENST00000373253 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
NCDN-203ENST00000373253 PLB1Q6P1J6 1458 aa18.12■□□□□ 0.49
NCDN-203ENST00000373253 EFCAB5A4FU69 1503 aa18.11■□□□□ 0.49
NCDN-203ENST00000373253 TIMELESSQ9UNS1 1208 aa18.11■□□□□ 0.49
NCDN-203ENST00000373253 NAIPQ13075 1403 aa18.1■□□□□ 0.49
NCDN-203ENST00000373253 EPRSP07814 1512 aaKnown RBP18.09■□□□□ 0.49
NCDN-203ENST00000373253 NBPF8Q3BBV2 869 aa18.09■□□□□ 0.49
NCDN-203ENST00000373253 PTPRGP23470 1445 aa18.08■□□□□ 0.49
NCDN-203ENST00000373253 UACAQ9BZF9 1416 aa18.08■□□□□ 0.49
NCDN-203ENST00000373253 TMC1Q8TDI8 760 aa18.08■□□□□ 0.48
NCDN-203ENST00000373253 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms