RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
NCDN-202ENST00000373243 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
NCDN-202ENST00000373243 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
NCDN-202ENST00000373243 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.29
NCDN-202ENST00000373243 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
NCDN-202ENST00000373243 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
NCDN-202ENST00000373243 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
NCDN-202ENST00000373243 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
NCDN-202ENST00000373243 NBR1Q14596 966 aa16.8■□□□□ 0.28
NCDN-202ENST00000373243 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
NCDN-202ENST00000373243 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.27
NCDN-202ENST00000373243 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
NCDN-202ENST00000373243 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
NCDN-202ENST00000373243 MSH5O43196 834 aa16.76■□□□□ 0.27
NCDN-202ENST00000373243 RAB3GAP2Q9H2M9 1393 aa16.73■□□□□ 0.27
NCDN-202ENST00000373243 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
NCDN-202ENST00000373243 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
NCDN-202ENST00000373243 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
NCDN-202ENST00000373243 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
NCDN-202ENST00000373243 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
NCDN-202ENST00000373243 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
NCDN-202ENST00000373243 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
NCDN-202ENST00000373243 CUX2O14529 1486 aa16.63■□□□□ 0.25
NCDN-202ENST00000373243 KIF21BO75037 1637 aa16.62■□□□□ 0.25
NCDN-202ENST00000373243 FBLN2P98095 1184 aa16.61■□□□□ 0.25
NCDN-202ENST00000373243 NESP48681 1621 aa16.6■□□□□ 0.25
NCDN-202ENST00000373243 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
NCDN-202ENST00000373243 SETD5Q9C0A6 1442 aa16.6■□□□□ 0.25
NCDN-202ENST00000373243 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
NCDN-202ENST00000373243 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
NCDN-202ENST00000373243 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
NCDN-202ENST00000373243 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
NCDN-202ENST00000373243 IL27Q8NEV9 243 aa16.57■□□□□ 0.24
NCDN-202ENST00000373243 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
NCDN-202ENST00000373243 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
NCDN-202ENST00000373243 FOXD1Q16676 465 aa16.54■□□□□ 0.24
NCDN-202ENST00000373243 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
NCDN-202ENST00000373243 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
NCDN-202ENST00000373243 EIF4G2P78344 907 aaKnown RBP eCLIP16.51■□□□□ 0.23
NCDN-202ENST00000373243 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
NCDN-202ENST00000373243 PKNOX2Q96KN3 472 aa16.5■□□□□ 0.23
NCDN-202ENST00000373243 CFTRP13569 1480 aa16.49■□□□□ 0.23
NCDN-202ENST00000373243 B4GALNT3Q6L9W6 998 aa16.49■□□□□ 0.23
NCDN-202ENST00000373243 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
NCDN-202ENST00000373243 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
NCDN-202ENST00000373243 CUX1P39880 1505 aa16.47■□□□□ 0.23
NCDN-202ENST00000373243 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
NCDN-202ENST00000373243 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.22
NCDN-202ENST00000373243 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
NCDN-202ENST00000373243 HSPA5P11021 654 aaKnown RBP16.44■□□□□ 0.22
NCDN-202ENST00000373243 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
NCDN-202ENST00000373243 CCER2I3L3R5 266 aa16.43■□□□□ 0.22
NCDN-202ENST00000373243 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
NCDN-202ENST00000373243 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
NCDN-202ENST00000373243 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
NCDN-202ENST00000373243 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
NCDN-202ENST00000373243 PLEKHG5O94827 1062 aa16.41■□□□□ 0.22
NCDN-202ENST00000373243 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
NCDN-202ENST00000373243 IGF1RP08069 1367 aa16.39■□□□□ 0.21
NCDN-202ENST00000373243 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
NCDN-202ENST00000373243 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
NCDN-202ENST00000373243 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
NCDN-202ENST00000373243 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
NCDN-202ENST00000373243 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
NCDN-202ENST00000373243 NOP58Q9Y2X3 529 aaKnown RBP16.35■□□□□ 0.21
NCDN-202ENST00000373243 RRBP1Q9P2E9 1410 aaKnown RBP16.35■□□□□ 0.21
NCDN-202ENST00000373243 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.21
NCDN-202ENST00000373243 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
NCDN-202ENST00000373243 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
NCDN-202ENST00000373243 L3MBTL2Q969R5 705 aa16.31■□□□□ 0.2
NCDN-202ENST00000373243 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
NCDN-202ENST00000373243 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
NCDN-202ENST00000373243 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
NCDN-202ENST00000373243 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
NCDN-202ENST00000373243 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
NCDN-202ENST00000373243 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
NCDN-202ENST00000373243 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
NCDN-202ENST00000373243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
NCDN-202ENST00000373243 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
NCDN-202ENST00000373243 RGL3Q3MIN7 710 aa16.23■□□□□ 0.19
NCDN-202ENST00000373243 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
NCDN-202ENST00000373243 CCDC184Q52MB2 194 aa16.23■□□□□ 0.19
NCDN-202ENST00000373243 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
NCDN-202ENST00000373243 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
NCDN-202ENST00000373243 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
NCDN-202ENST00000373243 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
NCDN-202ENST00000373243 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.188e-7■■■■■ 33.1
NCDN-202ENST00000373243 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
NCDN-202ENST00000373243 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
NCDN-202ENST00000373243 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
NCDN-202ENST00000373243 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
NCDN-202ENST00000373243 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
NCDN-202ENST00000373243 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
NCDN-202ENST00000373243 PRKRIP1Q9H875 184 aaPredicted RBP16.16■□□□□ 0.18
NCDN-202ENST00000373243 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
NCDN-202ENST00000373243 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
NCDN-202ENST00000373243 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
NCDN-202ENST00000373243 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
NCDN-202ENST00000373243 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
NCDN-202ENST00000373243 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms