RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.48
PTPRT-206ENST00000373198 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.49
PTPRT-206ENST00000373198 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPRT-206ENST00000373198 TMC1Q8TDI8 760 aa11.97□□□□□ -0.49
PTPRT-206ENST00000373198 NAP1L5Q96NT1 182 aaPredicted RBP11.97□□□□□ -0.49
PTPRT-206ENST00000373198 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
PTPRT-206ENST00000373198 IRX6P78412 446 aaPredicted RBP11.95□□□□□ -0.5
PTPRT-206ENST00000373198 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
PTPRT-206ENST00000373198 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
PTPRT-206ENST00000373198 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
PTPRT-206ENST00000373198 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
PTPRT-206ENST00000373198 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
PTPRT-206ENST00000373198 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
PTPRT-206ENST00000373198 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
PTPRT-206ENST00000373198 BECN1Q14457 450 aa11.91□□□□□ -0.5
PTPRT-206ENST00000373198 LMOD2Q6P5Q4 547 aa11.91□□□□□ -0.5
PTPRT-206ENST00000373198 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
PTPRT-206ENST00000373198 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
PTPRT-206ENST00000373198 FGD1P98174 961 aa11.89□□□□□ -0.51
PTPRT-206ENST00000373198 DDX10Q13206 875 aaKnown RBP11.88□□□□□ -0.51
PTPRT-206ENST00000373198 ARID4BQ4LE39 1312 aaPredicted RBP11.88□□□□□ -0.51
PTPRT-206ENST00000373198 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
PTPRT-206ENST00000373198 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
PTPRT-206ENST00000373198 PDE4CQ08493 712 aa11.86□□□□□ -0.51
PTPRT-206ENST00000373198 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
PTPRT-206ENST00000373198 GOLGA6L6A8MZA4 724 aa11.84□□□□□ -0.51
PTPRT-206ENST00000373198 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
PTPRT-206ENST00000373198 FTSJ3Q8IY81 847 aaKnown RBP11.82□□□□□ -0.52
PTPRT-206ENST00000373198 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
PTPRT-206ENST00000373198 KCNJ4P48050 445 aa11.82□□□□□ -0.52
PTPRT-206ENST00000373198 NOC3LQ8WTT2 800 aaKnown RBP11.81□□□□□ -0.52
PTPRT-206ENST00000373198 ERICH6BQ5W0A0 696 aa11.81□□□□□ -0.52
PTPRT-206ENST00000373198 KAT6BQ8WYB5 2073 aa11.81□□□□□ -0.52
PTPRT-206ENST00000373198 DDRGK1Q96HY6 314 aa11.8□□□□□ -0.52
PTPRT-206ENST00000373198 ARID3AQ99856 593 aa11.8□□□□□ -0.52
PTPRT-206ENST00000373198 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
PTPRT-206ENST00000373198 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
PTPRT-206ENST00000373198 ABCC9O60706 1549 aa11.77□□□□□ -0.53
PTPRT-206ENST00000373198 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
PTPRT-206ENST00000373198 NRDCO43847 1150 aa11.76□□□□□ -0.53
PTPRT-206ENST00000373198 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
PTPRT-206ENST00000373198 HIRIP3Q9BW71 556 aaPredicted RBP11.75□□□□□ -0.53
PTPRT-206ENST00000373198 KIAA2012Q0VF49 1180 aa11.74□□□□□ -0.53
PTPRT-206ENST00000373198 DRC7Q8IY82 874 aa11.74□□□□□ -0.53
PTPRT-206ENST00000373198 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
PTPRT-206ENST00000373198 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
PTPRT-206ENST00000373198 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
PTPRT-206ENST00000373198 GNL2Q13823 731 aaKnown RBP11.72□□□□□ -0.53
PTPRT-206ENST00000373198 CHAF1AQ13111 956 aaPredicted RBP11.72□□□□□ -0.53
PTPRT-206ENST00000373198 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
PTPRT-206ENST00000373198 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
PTPRT-206ENST00000373198 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
PTPRT-206ENST00000373198 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
PTPRT-206ENST00000373198 SOX12O15370 315 aa11.68□□□□□ -0.54
PTPRT-206ENST00000373198 TSPY4P0CV99 314 aa11.67□□□□□ -0.54
PTPRT-206ENST00000373198 TSPY10P0CW01 314 aa11.67□□□□□ -0.54
PTPRT-206ENST00000373198 A0A0U1RQG5 324 aaPredicted RBP11.67□□□□□ -0.54
PTPRT-206ENST00000373198 RGL3Q3MIN7 710 aa11.67□□□□□ -0.54
PTPRT-206ENST00000373198 L1TD1Q5T7N2 865 aaKnown RBP11.66□□□□□ -0.54
PTPRT-206ENST00000373198 RGS3P49796 1198 aa11.66□□□□□ -0.54
PTPRT-206ENST00000373198 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
PTPRT-206ENST00000373198 MAPK8IP3Q9UPT6 1336 aa11.65□□□□□ -0.54
PTPRT-206ENST00000373198 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
PTPRT-206ENST00000373198 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
PTPRT-206ENST00000373198 POGKQ9P215 609 aa11.61□□□□□ -0.55
PTPRT-206ENST00000373198 TMX4Q9H1E5 349 aaPredicted RBP11.61□□□□□ -0.55
PTPRT-206ENST00000373198 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
PTPRT-206ENST00000373198 CREBRFQ8IUR6 639 aa11.6□□□□□ -0.55
PTPRT-206ENST00000373198 TNNT3P45378 269 aaPredicted RBP11.6□□□□□ -0.55
PTPRT-206ENST00000373198 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
PTPRT-206ENST00000373198 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
PTPRT-206ENST00000373198 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
PTPRT-206ENST00000373198 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
PTPRT-206ENST00000373198 RRP7BPQ9NSQ0 103 aa11.59□□□□□ -0.55
PTPRT-206ENST00000373198 APBB1O00213 710 aa11.57□□□□□ -0.56
PTPRT-206ENST00000373198 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
PTPRT-206ENST00000373198 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
PTPRT-206ENST00000373198 EIF4G2P78344 907 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTPRT-206ENST00000373198 NOP58Q9Y2X3 529 aaKnown RBP11.56□□□□□ -0.56
PTPRT-206ENST00000373198 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
PTPRT-206ENST00000373198 G3V3G9 751 aa11.56□□□□□ -0.56
PTPRT-206ENST00000373198 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
PTPRT-206ENST00000373198 HSCBQ8IWL3 235 aa11.56□□□□□ -0.56
PTPRT-206ENST00000373198 MIER1Q8N108 512 aa11.55□□□□□ -0.56
PTPRT-206ENST00000373198 MCCP23508 829 aa11.55□□□□□ -0.56
PTPRT-206ENST00000373198 DEKP35659 375 aaKnown RBP11.54□□□□□ -0.56
PTPRT-206ENST00000373198 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
PTPRT-206ENST00000373198 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
PTPRT-206ENST00000373198 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
PTPRT-206ENST00000373198 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
PTPRT-206ENST00000373198 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.56
PTPRT-206ENST00000373198 RASSF8Q8NHQ8 419 aa11.52□□□□□ -0.56
PTPRT-206ENST00000373198 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
PTPRT-206ENST00000373198 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
PTPRT-206ENST00000373198 CC2D1BQ5T0F9 858 aaKnown RBP11.51□□□□□ -0.57
PTPRT-206ENST00000373198 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
PTPRT-206ENST00000373198 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
PTPRT-206ENST00000373198 MLECQ14165 292 aa11.5□□□□□ -0.57
PTPRT-206ENST00000373198 CEP89Q96ST8 783 aa11.5□□□□□ -0.57
PTPRT-206ENST00000373198 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms