RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 A0A0G2JS52 829 aa12.21□□□□□ -0.45
PTPRT-205ENST00000373193 TONSLQ96HA7 1378 aa12.21□□□□□ -0.46
PTPRT-205ENST00000373193 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.46
PTPRT-205ENST00000373193 MIER1Q8N108 512 aa12.2□□□□□ -0.46
PTPRT-205ENST00000373193 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
PTPRT-205ENST00000373193 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTPRT-205ENST00000373193 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
PTPRT-205ENST00000373193 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
PTPRT-205ENST00000373193 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
PTPRT-205ENST00000373193 HIRIP3Q9BW71 556 aaPredicted RBP12.18□□□□□ -0.46
PTPRT-205ENST00000373193 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
PTPRT-205ENST00000373193 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
PTPRT-205ENST00000373193 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
PTPRT-205ENST00000373193 FBLN2P98095 1184 aa12.14□□□□□ -0.47
PTPRT-205ENST00000373193 PPM1GO15355 546 aaPredicted RBP12.12□□□□□ -0.47
PTPRT-205ENST00000373193 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
PTPRT-205ENST00000373193 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
PTPRT-205ENST00000373193 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
PTPRT-205ENST00000373193 GOLGA6L6A8MZA4 724 aa12.1□□□□□ -0.47
PTPRT-205ENST00000373193 TNNT3P45378 269 aaPredicted RBP12.09□□□□□ -0.47
PTPRT-205ENST00000373193 RGS3P49796 1198 aa12.09□□□□□ -0.47
PTPRT-205ENST00000373193 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
PTPRT-205ENST00000373193 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
PTPRT-205ENST00000373193 DRC7Q8IY82 874 aa12.07□□□□□ -0.48
PTPRT-205ENST00000373193 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
PTPRT-205ENST00000373193 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
PTPRT-205ENST00000373193 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
PTPRT-205ENST00000373193 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
PTPRT-205ENST00000373193 CLSTN1O94985 981 aa12.04□□□□□ -0.48
PTPRT-205ENST00000373193 FTSJ3Q8IY81 847 aaKnown RBP12.02□□□□□ -0.49
PTPRT-205ENST00000373193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTPRT-205ENST00000373193 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
PTPRT-205ENST00000373193 NRDCO43847 1150 aa12□□□□□ -0.49
PTPRT-205ENST00000373193 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
PTPRT-205ENST00000373193 NOC3LQ8WTT2 800 aaKnown RBP11.99□□□□□ -0.49
PTPRT-205ENST00000373193 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
PTPRT-205ENST00000373193 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
PTPRT-205ENST00000373193 FGD1P98174 961 aa11.98□□□□□ -0.49
PTPRT-205ENST00000373193 PDE4CQ08493 712 aa11.98□□□□□ -0.49
PTPRT-205ENST00000373193 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
PTPRT-205ENST00000373193 B4GALNT3Q6L9W6 998 aa11.97□□□□□ -0.49
PTPRT-205ENST00000373193 GOLGA6L4A6NEF3 574 aa11.96□□□□□ -0.5
PTPRT-205ENST00000373193 CSRNP3Q8WYN3 585 aa11.95□□□□□ -0.5
PTPRT-205ENST00000373193 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
PTPRT-205ENST00000373193 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
PTPRT-205ENST00000373193 KCNJ4P48050 445 aa11.93□□□□□ -0.5
PTPRT-205ENST00000373193 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
PTPRT-205ENST00000373193 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
PTPRT-205ENST00000373193 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
PTPRT-205ENST00000373193 VSIG10Q8N0Z9 540 aa11.9□□□□□ -0.51
PTPRT-205ENST00000373193 PRM3Q9NNZ6 103 aa11.89□□□□□ -0.51
PTPRT-205ENST00000373193 OS9Q13438 667 aaPredicted RBP11.89□□□□□ -0.51
PTPRT-205ENST00000373193 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
PTPRT-205ENST00000373193 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
PTPRT-205ENST00000373193 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
PTPRT-205ENST00000373193 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
PTPRT-205ENST00000373193 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
PTPRT-205ENST00000373193 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
PTPRT-205ENST00000373193 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
PTPRT-205ENST00000373193 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
PTPRT-205ENST00000373193 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
PTPRT-205ENST00000373193 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
PTPRT-205ENST00000373193 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
PTPRT-205ENST00000373193 GNL2Q13823 731 aaKnown RBP11.82□□□□□ -0.52
PTPRT-205ENST00000373193 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
PTPRT-205ENST00000373193 PTMSP20962 102 aa11.82□□□□□ -0.52
PTPRT-205ENST00000373193 EIF4G2P78344 907 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPRT-205ENST00000373193 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTPRT-205ENST00000373193 APBB1O00213 710 aa11.79□□□□□ -0.52
PTPRT-205ENST00000373193 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
PTPRT-205ENST00000373193 DCAF1Q9Y4B6 1507 aa11.79□□□□□ -0.52
PTPRT-205ENST00000373193 NPHP1O15259 732 aa11.78□□□□□ -0.52
PTPRT-205ENST00000373193 CFAP53Q96M91 514 aa11.77□□□□□ -0.53
PTPRT-205ENST00000373193 GOLGA6L3A6NEY3 463 aa11.77□□□□□ -0.53
PTPRT-205ENST00000373193 GBP4Q96PP9 640 aa11.77□□□□□ -0.53
PTPRT-205ENST00000373193 GOLGA2Q08379 1002 aa11.76□□□□□ -0.53
PTPRT-205ENST00000373193 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
PTPRT-205ENST00000373193 ZNF771Q7L3S4 317 aaPredicted RBP11.76□□□□□ -0.53
PTPRT-205ENST00000373193 CREBRFQ8IUR6 639 aa11.76□□□□□ -0.53
PTPRT-205ENST00000373193 KNSTRNQ9Y448 316 aa11.75□□□□□ -0.53
PTPRT-205ENST00000373193 MCCP23508 829 aa11.75□□□□□ -0.53
PTPRT-205ENST00000373193 CC2D1BQ5T0F9 858 aaKnown RBP11.75□□□□□ -0.53
PTPRT-205ENST00000373193 RRP7BPQ9NSQ0 103 aa11.75□□□□□ -0.53
PTPRT-205ENST00000373193 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
PTPRT-205ENST00000373193 RGL3Q3MIN7 710 aa11.73□□□□□ -0.53
PTPRT-205ENST00000373193 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
PTPRT-205ENST00000373193 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
PTPRT-205ENST00000373193 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
PTPRT-205ENST00000373193 CCAR2Q8N163 923 aaKnown RBP11.72□□□□□ -0.53
PTPRT-205ENST00000373193 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
PTPRT-205ENST00000373193 PPP1R15AO75807 674 aaPredicted RBP11.72□□□□□ -0.53
PTPRT-205ENST00000373193 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
PTPRT-205ENST00000373193 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
PTPRT-205ENST00000373193 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
PTPRT-205ENST00000373193 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
PTPRT-205ENST00000373193 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
PTPRT-205ENST00000373193 TPM4P67936 248 aa11.66□□□□□ -0.54
PTPRT-205ENST00000373193 KIAA1211Q6ZU35 1233 aa11.66□□□□□ -0.54
PTPRT-205ENST00000373193 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
PTPRT-205ENST00000373193 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms