RNA–Protein interactions for RNA: ENST00000372596.5

SCMH1-206, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-206ENST00000372596 EEA1Q15075 1411 aa13.61□□□□□ -0.23
SCMH1-206ENST00000372596 DEKP35659 375 aaKnown RBP13.6□□□□□ -0.23
SCMH1-206ENST00000372596 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
SCMH1-206ENST00000372596 RAPGEF2Q9Y4G8 1499 aa13.58□□□□□ -0.23
SCMH1-206ENST00000372596 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
SCMH1-206ENST00000372596 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
SCMH1-206ENST00000372596 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
SCMH1-206ENST00000372596 WDR62O43379 1518 aa13.55□□□□□ -0.24
SCMH1-206ENST00000372596 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
SCMH1-206ENST00000372596 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.243e-6■■■■□ 21.2
SCMH1-206ENST00000372596 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
SCMH1-206ENST00000372596 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
SCMH1-206ENST00000372596 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
SCMH1-206ENST00000372596 UBE2Q2Q8WVN8 375 aa13.5□□□□□ -0.25
SCMH1-206ENST00000372596 FGD5Q6ZNL6 1462 aa13.49□□□□□ -0.25
SCMH1-206ENST00000372596 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
SCMH1-206ENST00000372596 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
SCMH1-206ENST00000372596 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
SCMH1-206ENST00000372596 CUX1P39880 1505 aa13.47□□□□□ -0.25
SCMH1-206ENST00000372596 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.25
SCMH1-206ENST00000372596 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
SCMH1-206ENST00000372596 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
SCMH1-206ENST00000372596 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
SCMH1-206ENST00000372596 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
SCMH1-206ENST00000372596 NEFLP07196 543 aa13.44□□□□□ -0.26
SCMH1-206ENST00000372596 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
SCMH1-206ENST00000372596 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
SCMH1-206ENST00000372596 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
SCMH1-206ENST00000372596 KIF27Q86VH2 1401 aa13.37□□□□□ -0.27
SCMH1-206ENST00000372596 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
SCMH1-206ENST00000372596 KIF21BO75037 1637 aa13.36□□□□□ -0.27
SCMH1-206ENST00000372596 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
SCMH1-206ENST00000372596 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
SCMH1-206ENST00000372596 TOP2BQ02880 1626 aa13.33□□□□□ -0.27
SCMH1-206ENST00000372596 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
SCMH1-206ENST00000372596 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
SCMH1-206ENST00000372596 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
SCMH1-206ENST00000372596 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
SCMH1-206ENST00000372596 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
SCMH1-206ENST00000372596 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
SCMH1-206ENST00000372596 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
SCMH1-206ENST00000372596 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
SCMH1-206ENST00000372596 ARID3CA6NKF2 412 aa13.26□□□□□ -0.29
SCMH1-206ENST00000372596 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
SCMH1-206ENST00000372596 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
SCMH1-206ENST00000372596 NBR1Q14596 966 aa13.26□□□□□ -0.29
SCMH1-206ENST00000372596 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
SCMH1-206ENST00000372596 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
SCMH1-206ENST00000372596 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
SCMH1-206ENST00000372596 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
SCMH1-206ENST00000372596 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
SCMH1-206ENST00000372596 IGF1RP08069 1367 aa13.24□□□□□ -0.29
SCMH1-206ENST00000372596 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
SCMH1-206ENST00000372596 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
SCMH1-206ENST00000372596 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-206ENST00000372596 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
SCMH1-206ENST00000372596 ARHGAP35Q9NRY4 1499 aa13.19□□□□□ -0.3
SCMH1-206ENST00000372596 BIVM-ERCC5R4GMW8 1640 aa13.18□□□□□ -0.3
SCMH1-206ENST00000372596 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
SCMH1-206ENST00000372596 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
SCMH1-206ENST00000372596 CHD1O14646 1710 aa13.17□□□□□ -0.3
SCMH1-206ENST00000372596 WASHC2AQ641Q2 1341 aa13.16□□□□□ -0.3
SCMH1-206ENST00000372596 MAPKBP1O60336 1514 aa13.16□□□□□ -0.3
SCMH1-206ENST00000372596 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
SCMH1-206ENST00000372596 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
SCMH1-206ENST00000372596 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
SCMH1-206ENST00000372596 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
SCMH1-206ENST00000372596 C11orf95C9JLR9 678 aaPredicted RBP13.13□□□□□ -0.31
SCMH1-206ENST00000372596 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
SCMH1-206ENST00000372596 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
SCMH1-206ENST00000372596 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
SCMH1-206ENST00000372596 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
SCMH1-206ENST00000372596 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
SCMH1-206ENST00000372596 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
SCMH1-206ENST00000372596 RRBP1Q9P2E9 1410 aaKnown RBP13.11□□□□□ -0.31
SCMH1-206ENST00000372596 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
SCMH1-206ENST00000372596 RAB3GAP2Q9H2M9 1393 aa13.1□□□□□ -0.31
SCMH1-206ENST00000372596 WASHC2CQ9Y4E1 1318 aa13.09□□□□□ -0.31
SCMH1-206ENST00000372596 ANP32CO43423 234 aa13.09□□□□□ -0.31
SCMH1-206ENST00000372596 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
SCMH1-206ENST00000372596 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
SCMH1-206ENST00000372596 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
SCMH1-206ENST00000372596 JPH4Q96JJ6 628 aa13.08□□□□□ -0.31
SCMH1-206ENST00000372596 GRIN2AQ12879 1464 aa13.08□□□□□ -0.32
SCMH1-206ENST00000372596 CHIC2Q9UKJ5 165 aa13.07□□□□□ -0.32
SCMH1-206ENST00000372596 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
SCMH1-206ENST00000372596 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
SCMH1-206ENST00000372596 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
SCMH1-206ENST00000372596 B4GALNT3Q6L9W6 998 aa13.04□□□□□ -0.32
SCMH1-206ENST00000372596 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
SCMH1-206ENST00000372596 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.32
SCMH1-206ENST00000372596 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCMH1-206ENST00000372596 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
SCMH1-206ENST00000372596 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
SCMH1-206ENST00000372596 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
SCMH1-206ENST00000372596 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
SCMH1-206ENST00000372596 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
SCMH1-206ENST00000372596 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
SCMH1-206ENST00000372596 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
SCMH1-206ENST00000372596 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms