RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
PREX1-201ENST00000371941 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
PREX1-201ENST00000371941 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
PREX1-201ENST00000371941 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
PREX1-201ENST00000371941 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
PREX1-201ENST00000371941 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
PREX1-201ENST00000371941 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
PREX1-201ENST00000371941 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
PREX1-201ENST00000371941 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
PREX1-201ENST00000371941 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
PREX1-201ENST00000371941 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
PREX1-201ENST00000371941 WIZO95785 1651 aa18.16■□□□□ 0.5
PREX1-201ENST00000371941 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
PREX1-201ENST00000371941 NEFMP07197 916 aa18.15■□□□□ 0.5
PREX1-201ENST00000371941 FOXD1Q16676 465 aa18.15■□□□□ 0.5
PREX1-201ENST00000371941 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
PREX1-201ENST00000371941 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
PREX1-201ENST00000371941 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
PREX1-201ENST00000371941 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
PREX1-201ENST00000371941 NACADO15069 1562 aa18.07■□□□□ 0.48
PREX1-201ENST00000371941 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
PREX1-201ENST00000371941 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
PREX1-201ENST00000371941 KIF27Q86VH2 1401 aa18.04■□□□□ 0.48
PREX1-201ENST00000371941 EEA1Q15075 1411 aa18.04■□□□□ 0.48
PREX1-201ENST00000371941 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
PREX1-201ENST00000371941 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.47
PREX1-201ENST00000371941 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
PREX1-201ENST00000371941 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
PREX1-201ENST00000371941 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
PREX1-201ENST00000371941 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
PREX1-201ENST00000371941 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
PREX1-201ENST00000371941 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
PREX1-201ENST00000371941 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
PREX1-201ENST00000371941 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
PREX1-201ENST00000371941 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
PREX1-201ENST00000371941 RTN4Q9NQC3 1192 aaKnown RBP17.96■□□□□ 0.47
PREX1-201ENST00000371941 ZBTB7CA1YPR0 619 aa17.96■□□□□ 0.46
PREX1-201ENST00000371941 CUX2O14529 1486 aa17.95■□□□□ 0.46
PREX1-201ENST00000371941 ANP32EQ9BTT0 268 aa17.93■□□□□ 0.46
PREX1-201ENST00000371941 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
PREX1-201ENST00000371941 UPF2Q9HAU5 1272 aaKnown RBP17.92■□□□□ 0.46
PREX1-201ENST00000371941 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
PREX1-201ENST00000371941 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
PREX1-201ENST00000371941 TPRNQ4KMQ1 711 aa17.9■□□□□ 0.46
PREX1-201ENST00000371941 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
PREX1-201ENST00000371941 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
PREX1-201ENST00000371941 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
PREX1-201ENST00000371941 RGS3P49796 1198 aa17.87■□□□□ 0.45
PREX1-201ENST00000371941 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
PREX1-201ENST00000371941 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
PREX1-201ENST00000371941 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
PREX1-201ENST00000371941 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
PREX1-201ENST00000371941 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
PREX1-201ENST00000371941 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
PREX1-201ENST00000371941 KNSTRNQ9Y448 316 aa17.8■□□□□ 0.44
PREX1-201ENST00000371941 RBM19Q9Y4C8 960 aaKnown RBP17.79■□□□□ 0.44
PREX1-201ENST00000371941 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
PREX1-201ENST00000371941 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
PREX1-201ENST00000371941 SAFB2Q14151 953 aaKnown RBP eCLIP17.77■□□□□ 0.44
PREX1-201ENST00000371941 SPRYD3Q8NCJ5 442 aa17.74■□□□□ 0.43
PREX1-201ENST00000371941 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
PREX1-201ENST00000371941 A0A0G2JS52 829 aa17.73■□□□□ 0.43
PREX1-201ENST00000371941 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
PREX1-201ENST00000371941 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
PREX1-201ENST00000371941 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
PREX1-201ENST00000371941 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
PREX1-201ENST00000371941 PKD2Q13563 968 aa17.7■□□□□ 0.42
PREX1-201ENST00000371941 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
PREX1-201ENST00000371941 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
PREX1-201ENST00000371941 SOX12O15370 315 aa17.68■□□□□ 0.42
PREX1-201ENST00000371941 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
PREX1-201ENST00000371941 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
PREX1-201ENST00000371941 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
PREX1-201ENST00000371941 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
PREX1-201ENST00000371941 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
PREX1-201ENST00000371941 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
PREX1-201ENST00000371941 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
PREX1-201ENST00000371941 TAOK2Q9UL54 1235 aa17.63■□□□□ 0.41
PREX1-201ENST00000371941 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
PREX1-201ENST00000371941 DDRGK1Q96HY6 314 aa17.61■□□□□ 0.41
PREX1-201ENST00000371941 MLECQ14165 292 aa17.6■□□□□ 0.41
PREX1-201ENST00000371941 NUTM2DQ5VT03 806 aaPredicted RBP17.6■□□□□ 0.41
PREX1-201ENST00000371941 ARID4BQ4LE39 1312 aaPredicted RBP17.6■□□□□ 0.41
PREX1-201ENST00000371941 L3MBTL2Q969R5 705 aa17.6■□□□□ 0.41
PREX1-201ENST00000371941 STK26Q9P289 416 aa17.6■□□□□ 0.41
PREX1-201ENST00000371941 DHX57Q6P158 1386 aaKnown RBP17.59■□□□□ 0.41
PREX1-201ENST00000371941 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.4
PREX1-201ENST00000371941 DEKP35659 375 aaKnown RBP17.57■□□□□ 0.4
PREX1-201ENST00000371941 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
PREX1-201ENST00000371941 BECN1Q14457 450 aa17.56■□□□□ 0.4
PREX1-201ENST00000371941 CCDC146Q8IYE0 955 aa17.56■□□□□ 0.4
PREX1-201ENST00000371941 POGKQ9P215 609 aa17.56■□□□□ 0.4
PREX1-201ENST00000371941 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
PREX1-201ENST00000371941 TMF1P82094 1093 aa17.54■□□□□ 0.4
PREX1-201ENST00000371941 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
PREX1-201ENST00000371941 GGT6Q6P531 493 aa17.52■□□□□ 0.4
PREX1-201ENST00000371941 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
PREX1-201ENST00000371941 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.39
PREX1-201ENST00000371941 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
PREX1-201ENST00000371941 APBB1O00213 710 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms