RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
CTCFL-202ENST00000371196 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
CTCFL-202ENST00000371196 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
CTCFL-202ENST00000371196 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
CTCFL-202ENST00000371196 CC2D2AQ9P2K1 1620 aa16.21■□□□□ 0.19
CTCFL-202ENST00000371196 SIN3AQ96ST3 1273 aa16.21■□□□□ 0.18
CTCFL-202ENST00000371196 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.18
CTCFL-202ENST00000371196 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
CTCFL-202ENST00000371196 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
CTCFL-202ENST00000371196 SETD5Q9C0A6 1442 aa16.15■□□□□ 0.18
CTCFL-202ENST00000371196 ERICH6BQ5W0A0 696 aa16.15■□□□□ 0.18
CTCFL-202ENST00000371196 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.18
CTCFL-202ENST00000371196 HNRNPUQ00839 825 aaKnown RBP eCLIP16.14■□□□□ 0.17
CTCFL-202ENST00000371196 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
CTCFL-202ENST00000371196 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
CTCFL-202ENST00000371196 PRXQ9BXM0 1461 aa16.11■□□□□ 0.17
CTCFL-202ENST00000371196 NOP58Q9Y2X3 529 aaKnown RBP16.09■□□□□ 0.17
CTCFL-202ENST00000371196 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
CTCFL-202ENST00000371196 NBR1Q14596 966 aa16.09■□□□□ 0.17
CTCFL-202ENST00000371196 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
CTCFL-202ENST00000371196 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
CTCFL-202ENST00000371196 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-202ENST00000371196 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.15
CTCFL-202ENST00000371196 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
CTCFL-202ENST00000371196 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-202ENST00000371196 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
CTCFL-202ENST00000371196 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
CTCFL-202ENST00000371196 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
CTCFL-202ENST00000371196 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
CTCFL-202ENST00000371196 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
CTCFL-202ENST00000371196 PHLDB1Q86UU1 1377 aa15.94■□□□□ 0.14
CTCFL-202ENST00000371196 MAP3K1Q13233 1512 aa15.93■□□□□ 0.14
CTCFL-202ENST00000371196 IPO9Q96P70 1041 aaKnown RBP15.91■□□□□ 0.14
CTCFL-202ENST00000371196 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
CTCFL-202ENST00000371196 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
CTCFL-202ENST00000371196 ANP32AP39687 249 aaKnown RBP15.9■□□□□ 0.14
CTCFL-202ENST00000371196 IL27Q8NEV9 243 aa15.89■□□□□ 0.13
CTCFL-202ENST00000371196 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
CTCFL-202ENST00000371196 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
CTCFL-202ENST00000371196 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
CTCFL-202ENST00000371196 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
CTCFL-202ENST00000371196 CCDC136Q96JN2 1154 aa15.85■□□□□ 0.13
CTCFL-202ENST00000371196 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
CTCFL-202ENST00000371196 CFTRP13569 1480 aa15.84■□□□□ 0.13
CTCFL-202ENST00000371196 WASHC2AQ641Q2 1341 aa15.84■□□□□ 0.13
CTCFL-202ENST00000371196 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
CTCFL-202ENST00000371196 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
CTCFL-202ENST00000371196 NESP48681 1621 aa15.83■□□□□ 0.12
CTCFL-202ENST00000371196 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
CTCFL-202ENST00000371196 MRS2Q9HD23 443 aa15.78■□□□□ 0.12
CTCFL-202ENST00000371196 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.12
CTCFL-202ENST00000371196 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.11
CTCFL-202ENST00000371196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.11
CTCFL-202ENST00000371196 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.76■□□□□ 0.11
CTCFL-202ENST00000371196 CUX1P39880 1505 aa15.76■□□□□ 0.11
CTCFL-202ENST00000371196 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
CTCFL-202ENST00000371196 NCOA2Q15596 1464 aa15.75■□□□□ 0.11
CTCFL-202ENST00000371196 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
CTCFL-202ENST00000371196 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
CTCFL-202ENST00000371196 CFAP43Q8NDM7 1665 aa15.74■□□□□ 0.11
CTCFL-202ENST00000371196 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
CTCFL-202ENST00000371196 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTCFL-202ENST00000371196 UBE2Q2Q8WVN8 375 aa15.73■□□□□ 0.11
CTCFL-202ENST00000371196 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
CTCFL-202ENST00000371196 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
CTCFL-202ENST00000371196 USP35Q9P2H5 1018 aa15.71■□□□□ 0.11
CTCFL-202ENST00000371196 NEFMP07197 916 aa15.7■□□□□ 0.1
CTCFL-202ENST00000371196 SMG6Q86US8 1419 aaKnown RBP15.7■□□□□ 0.1
CTCFL-202ENST00000371196 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
CTCFL-202ENST00000371196 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
CTCFL-202ENST00000371196 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
CTCFL-202ENST00000371196 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
CTCFL-202ENST00000371196 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
CTCFL-202ENST00000371196 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
CTCFL-202ENST00000371196 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
CTCFL-202ENST00000371196 LAS1LQ9Y4W2 734 aaKnown RBP15.67■□□□□ 0.1
CTCFL-202ENST00000371196 IGF1RP08069 1367 aa15.66■□□□□ 0.1
CTCFL-202ENST00000371196 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
CTCFL-202ENST00000371196 CCDC7Q96M83 1385 aa15.66■□□□□ 0.1
CTCFL-202ENST00000371196 P3H3Q8IVL6 736 aa15.66■□□□□ 0.1
CTCFL-202ENST00000371196 PTPN23Q9H3S7 1636 aa15.65■□□□□ 0.1
CTCFL-202ENST00000371196 FGD6Q6ZV73 1430 aa15.65■□□□□ 0.1
CTCFL-202ENST00000371196 PTPRKQ15262 1439 aa15.64■□□□□ 0.09
CTCFL-202ENST00000371196 NCOA1Q15788 1441 aa15.64■□□□□ 0.09
CTCFL-202ENST00000371196 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■■■□□ 17.6
CTCFL-202ENST00000371196 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
CTCFL-202ENST00000371196 NAIPQ13075 1403 aa15.62■□□□□ 0.09
CTCFL-202ENST00000371196 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
CTCFL-202ENST00000371196 PPM1GO15355 546 aaPredicted RBP15.62■□□□□ 0.09
CTCFL-202ENST00000371196 FMN1Q68DA7 1419 aa15.59■□□□□ 0.09
CTCFL-202ENST00000371196 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
CTCFL-202ENST00000371196 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.09
CTCFL-202ENST00000371196 BRPF3Q9ULD4 1205 aa15.58■□□□□ 0.08
CTCFL-202ENST00000371196 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
CTCFL-202ENST00000371196 PDE4AP27815 886 aa15.57■□□□□ 0.08
CTCFL-202ENST00000371196 FHOD3Q2V2M9 1422 aa15.55■□□□□ 0.08
CTCFL-202ENST00000371196 CASKIN1Q8WXD9 1431 aa15.55■□□□□ 0.08
CTCFL-202ENST00000371196 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
CTCFL-202ENST00000371196 EIF5BO60841 1220 aaKnown RBP15.55■□□□□ 0.08
CTCFL-202ENST00000371196 GSE1Q14687 1217 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms