RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 KIF13AQ9H1H9 1805 aa26.86■■□□□ 1.89
RPF1-202ENST00000370656 PRG4Q92954 1404 aaPredicted RBP26.78■■□□□ 1.88
RPF1-202ENST00000370656 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
RPF1-202ENST00000370656 RUSC2Q8N2Y8 1516 aa26.66■■□□□ 1.86
RPF1-202ENST00000370656 NPM1P06748 294 aaKnown RBP eCLIP26.66■■□□□ 1.86
RPF1-202ENST00000370656 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
RPF1-202ENST00000370656 ABCC10Q5T3U5 1492 aa26.57■■□□□ 1.84
RPF1-202ENST00000370656 MAPKBP1O60336 1514 aa26.57■■□□□ 1.84
RPF1-202ENST00000370656 ADCY10Q96PN6 1610 aa26.52■■□□□ 1.84
RPF1-202ENST00000370656 DIP2BQ9P265 1576 aa26.52■■□□□ 1.84
RPF1-202ENST00000370656 KIAA0586Q9BVV6 1533 aa26.5■■□□□ 1.83
RPF1-202ENST00000370656 CUL7Q14999 1698 aa26.49■■□□□ 1.83
RPF1-202ENST00000370656 KDM6BO15054 1643 aa26.48■■□□□ 1.83
RPF1-202ENST00000370656 TSPOAP1O95153 1857 aa26.48■■□□□ 1.83
RPF1-202ENST00000370656 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
RPF1-202ENST00000370656 IGF1RP08069 1367 aa26.44■■□□□ 1.82
RPF1-202ENST00000370656 KDM4FA0A1W2PPD8 638 aa26.34■■□□□ 1.81
RPF1-202ENST00000370656 PTPRGP23470 1445 aa26.33■■□□□ 1.81
RPF1-202ENST00000370656 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
RPF1-202ENST00000370656 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
RPF1-202ENST00000370656 TNIKQ9UKE5 1360 aa26.25■■□□□ 1.79
RPF1-202ENST00000370656 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
RPF1-202ENST00000370656 ABCC2Q92887 1545 aa26.24■■□□□ 1.79
RPF1-202ENST00000370656 IQGAP2Q13576 1575 aa26.22■■□□□ 1.79
RPF1-202ENST00000370656 ILDR1Q86SU0 546 aaPredicted RBP26.2■■□□□ 1.78
RPF1-202ENST00000370656 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
RPF1-202ENST00000370656 ASXL2Q76L83 1435 aa26.17■■□□□ 1.78
RPF1-202ENST00000370656 GLI2P10070 1586 aa26.16■■□□□ 1.78
RPF1-202ENST00000370656 UHRF1BP1LA0JNW5 1464 aa26.15■■□□□ 1.78
RPF1-202ENST00000370656 PPRC1Q5VV67 1664 aaKnown RBP26.13■■□□□ 1.77
RPF1-202ENST00000370656 UACAQ9BZF9 1416 aa26.12■■□□□ 1.77
RPF1-202ENST00000370656 FOXD1Q16676 465 aa26.11■■□□□ 1.77
RPF1-202ENST00000370656 ADGRL1O94910 1474 aa26.09■■□□□ 1.77
RPF1-202ENST00000370656 DISP1Q96F81 1524 aa26.07■■□□□ 1.76
RPF1-202ENST00000370656 KDM5BQ9UGL1 1544 aa26.03■■□□□ 1.76
RPF1-202ENST00000370656 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
RPF1-202ENST00000370656 UGGT2Q9NYU1 1516 aa26.01■■□□□ 1.75
RPF1-202ENST00000370656 MAP3K4Q9Y6R4 1608 aa26■■□□□ 1.75
RPF1-202ENST00000370656 EPRSP07814 1512 aaKnown RBP26■■□□□ 1.75
RPF1-202ENST00000370656 TEX14Q8IWB6 1497 aa26■■□□□ 1.75
RPF1-202ENST00000370656 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
RPF1-202ENST00000370656 KIAA0556O60303 1618 aa25.97■■□□□ 1.75
RPF1-202ENST00000370656 HECW2Q9P2P5 1572 aa25.96■■□□□ 1.75
RPF1-202ENST00000370656 COL17A1Q9UMD9 1497 aaPredicted RBP25.9■■□□□ 1.74
RPF1-202ENST00000370656 CTTNBP2Q8WZ74 1663 aa25.88■■□□□ 1.73
RPF1-202ENST00000370656 WDR7Q9Y4E6 1490 aa25.87■■□□□ 1.73
RPF1-202ENST00000370656 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
RPF1-202ENST00000370656 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
RPF1-202ENST00000370656 CD109Q6YHK3 1445 aa25.76■■□□□ 1.71
RPF1-202ENST00000370656 MAGI3Q5TCQ9 1506 aa25.75■■□□□ 1.71
RPF1-202ENST00000370656 ABCA8O94911 1581 aa25.73■■□□□ 1.71
RPF1-202ENST00000370656 KCNH8Q96L42 1107 aa25.73■■□□□ 1.71
RPF1-202ENST00000370656 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
RPF1-202ENST00000370656 KIF21BO75037 1637 aa25.65■■□□□ 1.7
RPF1-202ENST00000370656 PRXQ9BXM0 1461 aa25.62■■□□□ 1.69
RPF1-202ENST00000370656 ARAP3Q8WWN8 1544 aa25.57■■□□□ 1.68
RPF1-202ENST00000370656 PHLDB1Q86UU1 1377 aa25.52■■□□□ 1.68
RPF1-202ENST00000370656 ATP10BO94823 1461 aa25.52■■□□□ 1.68
RPF1-202ENST00000370656 ARID3CA6NKF2 412 aa25.51■■□□□ 1.67
RPF1-202ENST00000370656 P3H3Q8IVL6 736 aa25.5■■□□□ 1.67
RPF1-202ENST00000370656 ABCA9Q8IUA7 1624 aa25.49■■□□□ 1.67
RPF1-202ENST00000370656 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
RPF1-202ENST00000370656 RAPGEF6Q8TEU7 1601 aa25.44■■□□□ 1.66
RPF1-202ENST00000370656 SAMD9Q5K651 1589 aa25.43■■□□□ 1.66
RPF1-202ENST00000370656 NEO1Q92859 1461 aa25.41■■□□□ 1.66
RPF1-202ENST00000370656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.41■■□□□ 1.66
RPF1-202ENST00000370656 HNRNPUL2Q1KMD3 747 aaKnown RBP25.41■■□□□ 1.66
RPF1-202ENST00000370656 ADAMTSL3P82987 1691 aa25.4■■□□□ 1.66
RPF1-202ENST00000370656 PTPRMP28827 1452 aa25.38■■□□□ 1.65
RPF1-202ENST00000370656 RAPGEF3O95398 923 aa25.37■■□□□ 1.65
RPF1-202ENST00000370656 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
RPF1-202ENST00000370656 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
RPF1-202ENST00000370656 ARID4BQ4LE39 1312 aaPredicted RBP25.31■■□□□ 1.64
RPF1-202ENST00000370656 MADDQ8WXG6 1647 aa25.3■■□□□ 1.64
RPF1-202ENST00000370656 NUP153P49790 1475 aaKnown RBP25.28■■□□□ 1.64
RPF1-202ENST00000370656 PCF11O94913 1555 aaKnown RBP25.28■■□□□ 1.64
RPF1-202ENST00000370656 FRMPD1Q5SYB0 1578 aa25.28■■□□□ 1.64
RPF1-202ENST00000370656 PLEKHD1A6NEE1 506 aa25.25■■□□□ 1.63
RPF1-202ENST00000370656 CFAP74Q9C0B2 1584 aa25.24■■□□□ 1.63
RPF1-202ENST00000370656 EEA1Q15075 1411 aa25.24■■□□□ 1.63
RPF1-202ENST00000370656 RANGAP1P46060 587 aaPredicted RBP25.24■■□□□ 1.63
RPF1-202ENST00000370656 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
RPF1-202ENST00000370656 ARHGEF40Q8TER5 1519 aa25.22■■□□□ 1.63
RPF1-202ENST00000370656 DENND4BO75064 1496 aaPredicted RBP25.22■■□□□ 1.63
RPF1-202ENST00000370656 FHOD3Q2V2M9 1422 aa25.22■■□□□ 1.63
RPF1-202ENST00000370656 LMTK3Q96Q04 1460 aa25.21■■□□□ 1.63
RPF1-202ENST00000370656 RICTORQ6R327 1708 aa25.2■■□□□ 1.63
RPF1-202ENST00000370656 AKNAQ7Z591 1439 aa25.19■■□□□ 1.62
RPF1-202ENST00000370656 FANCAO15360 1455 aa25.18■■□□□ 1.62
RPF1-202ENST00000370656 POGZQ7Z3K3 1410 aa25.15■■□□□ 1.62
RPF1-202ENST00000370656 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
RPF1-202ENST00000370656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.14■■□□□ 1.62
RPF1-202ENST00000370656 ZMYM4Q5VZL5 1548 aa25.11■■□□□ 1.61
RPF1-202ENST00000370656 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
RPF1-202ENST00000370656 ZFYVE16Q7Z3T8 1539 aa25.09■■□□□ 1.61
RPF1-202ENST00000370656 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
RPF1-202ENST00000370656 MAGI2Q86UL8 1455 aa25.08■■□□□ 1.6
RPF1-202ENST00000370656 HSPA2P54652 639 aa25.07■■□□□ 1.6
RPF1-202ENST00000370656 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
RPF1-202ENST00000370656 YEATS2Q9ULM3 1422 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms