RNA–Protein interactions for RNA: ENST00000370007.5

NOLC1-201, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,727 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-201ENST00000370007 GLIPR1L2Q4G1C9 344 aa9.94□□□□□ -0.82
NOLC1-201ENST00000370007 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
NOLC1-201ENST00000370007 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
NOLC1-201ENST00000370007 FANCIQ9NVI1 1328 aa9.93□□□□□ -0.82
NOLC1-201ENST00000370007 RBM10P98175 930 aaKnown RBP9.91□□□□□ -0.82
NOLC1-201ENST00000370007 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
NOLC1-201ENST00000370007 PLPPR3Q6T4P5 718 aa9.9□□□□□ -0.82
NOLC1-201ENST00000370007 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
NOLC1-201ENST00000370007 FGD1P98174 961 aa9.89□□□□□ -0.83
NOLC1-201ENST00000370007 PAK3O75914 559 aaPredicted RBP9.89□□□□□ -0.83
NOLC1-201ENST00000370007 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
NOLC1-201ENST00000370007 BRPF3Q9ULD4 1205 aa9.87□□□□□ -0.83
NOLC1-201ENST00000370007 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
NOLC1-201ENST00000370007 CDK11AQ9UQ88 783 aaPredicted RBP9.86□□□□□ -0.83
NOLC1-201ENST00000370007 AAMPQ13685 434 aa9.85□□□□□ -0.83
NOLC1-201ENST00000370007 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
NOLC1-201ENST00000370007 NOP58Q9Y2X3 529 aaKnown RBP9.85□□□□□ -0.83
NOLC1-201ENST00000370007 IRX6P78412 446 aaPredicted RBP9.82□□□□□ -0.84
NOLC1-201ENST00000370007 CFTRP13569 1480 aa9.82□□□□□ -0.84
NOLC1-201ENST00000370007 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
NOLC1-201ENST00000370007 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
NOLC1-201ENST00000370007 MROH2BQ7Z745 1585 aa9.79□□□□□ -0.84
NOLC1-201ENST00000370007 IFT140Q96RY7 1462 aa9.78□□□□□ -0.84
NOLC1-201ENST00000370007 RANGAP1P46060 587 aaPredicted RBP9.77□□□□□ -0.85
NOLC1-201ENST00000370007 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
NOLC1-201ENST00000370007 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
NOLC1-201ENST00000370007 PAXIP1Q6ZW49 1069 aaPredicted RBP9.74□□□□□ -0.85
NOLC1-201ENST00000370007 NEFMP07197 916 aa9.74□□□□□ -0.85
NOLC1-201ENST00000370007 NESP48681 1621 aa9.74□□□□□ -0.85
NOLC1-201ENST00000370007 TRIM52Q96A61 297 aa9.73□□□□□ -0.85
NOLC1-201ENST00000370007 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
NOLC1-201ENST00000370007 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
NOLC1-201ENST00000370007 OSCARQ8IYS5 282 aa9.71□□□□□ -0.85
NOLC1-201ENST00000370007 HSP90AA2PQ14568 343 aaPredicted RBP9.69□□□□□ -0.86
NOLC1-201ENST00000370007 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
NOLC1-201ENST00000370007 RSF1Q96T23 1441 aaPredicted RBP9.67□□□□□ -0.86
NOLC1-201ENST00000370007 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
NOLC1-201ENST00000370007 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
NOLC1-201ENST00000370007 CHMP4BQ9H444 224 aaKnown RBP9.65□□□□□ -0.86
NOLC1-201ENST00000370007 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
NOLC1-201ENST00000370007 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
NOLC1-201ENST00000370007 ANP32AP39687 249 aaKnown RBP9.62□□□□□ -0.87
NOLC1-201ENST00000370007 WIZO95785 1651 aa9.62□□□□□ -0.87
NOLC1-201ENST00000370007 RGS3P49796 1198 aa9.62□□□□□ -0.87
NOLC1-201ENST00000370007 NAP1L5Q96NT1 182 aaPredicted RBP9.62□□□□□ -0.87
NOLC1-201ENST00000370007 NPM2Q86SE8 214 aaKnown RBP9.61□□□□□ -0.87
NOLC1-201ENST00000370007 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
NOLC1-201ENST00000370007 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
NOLC1-201ENST00000370007 NAP1L2Q9ULW6 460 aaPredicted RBP9.6□□□□□ -0.87
NOLC1-201ENST00000370007 B4GALNT3Q6L9W6 998 aa9.59□□□□□ -0.87
NOLC1-201ENST00000370007 URB2Q14146 1524 aaKnown RBP9.58□□□□□ -0.88
NOLC1-201ENST00000370007 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
NOLC1-201ENST00000370007 WASHC2AQ641Q2 1341 aa9.57□□□□□ -0.88
NOLC1-201ENST00000370007 HSP90AA1P07900 732 aaKnown RBP9.57□□□□□ -0.88
NOLC1-201ENST00000370007 TOPBP1Q92547 1522 aa9.56□□□□□ -0.88
NOLC1-201ENST00000370007 WASHC2CQ9Y4E1 1318 aa9.56□□□□□ -0.88
NOLC1-201ENST00000370007 MAGI1Q96QZ7 1491 aaPredicted RBP9.56□□□□□ -0.88
NOLC1-201ENST00000370007 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
NOLC1-201ENST00000370007 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
NOLC1-201ENST00000370007 GSE1Q14687 1217 aa9.54□□□□□ -0.88
NOLC1-201ENST00000370007 RRP9O43818 475 aaKnown RBP9.53□□□□□ -0.88
NOLC1-201ENST00000370007 FRAT1Q92837 279 aaPredicted RBP9.53□□□□□ -0.88
NOLC1-201ENST00000370007 AMER1Q5JTC6 1135 aaPredicted RBP9.52□□□□□ -0.89
NOLC1-201ENST00000370007 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
NOLC1-201ENST00000370007 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
NOLC1-201ENST00000370007 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
NOLC1-201ENST00000370007 NCBP3Q53F19 620 aaKnown RBP9.51□□□□□ -0.89
NOLC1-201ENST00000370007 RIMBP3CA6NJZ7 1639 aa9.51□□□□□ -0.89
NOLC1-201ENST00000370007 RIMBP3BA6NNM3 1639 aa9.51□□□□□ -0.89
NOLC1-201ENST00000370007 RIMBP3Q9UFD9 1639 aa9.51□□□□□ -0.89
NOLC1-201ENST00000370007 FOXD1Q16676 465 aa9.49□□□□□ -0.89
NOLC1-201ENST00000370007 ARXQ96QS3 562 aa9.49□□□□□ -0.89
NOLC1-201ENST00000370007 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
NOLC1-201ENST00000370007 TULP1O00294 542 aaPredicted RBP9.49□□□□□ -0.89
NOLC1-201ENST00000370007 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
NOLC1-201ENST00000370007 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
NOLC1-201ENST00000370007 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
NOLC1-201ENST00000370007 RRAGDQ9NQL2 400 aaPredicted RBP9.48□□□□□ -0.89
NOLC1-201ENST00000370007 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
NOLC1-201ENST00000370007 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
NOLC1-201ENST00000370007 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
NOLC1-201ENST00000370007 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
NOLC1-201ENST00000370007 CHMP4AQ9BY43 222 aa9.47□□□□□ -0.89
NOLC1-201ENST00000370007 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
NOLC1-201ENST00000370007 PPP4R2Q9NY27 417 aa9.46□□□□□ -0.9
NOLC1-201ENST00000370007 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
NOLC1-201ENST00000370007 ARID3AQ99856 593 aa9.45□□□□□ -0.9
NOLC1-201ENST00000370007 PRDM4Q9UKN5 801 aa9.45□□□□□ -0.9
NOLC1-201ENST00000370007 PNNQ9H307 717 aaKnown RBP9.45□□□□□ -0.9
NOLC1-201ENST00000370007 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
NOLC1-201ENST00000370007 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
NOLC1-201ENST00000370007 VGLL3A8MV65 326 aa9.44□□□□□ -0.9
NOLC1-201ENST00000370007 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
NOLC1-201ENST00000370007 HNRNPUQ00839 825 aaKnown RBP eCLIP9.42□□□□□ -0.9
NOLC1-201ENST00000370007 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
NOLC1-201ENST00000370007 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
NOLC1-201ENST00000370007 SOGA1O94964 1423 aa9.41□□□□□ -0.9
NOLC1-201ENST00000370007 PPM1GO15355 546 aaPredicted RBP9.41□□□□□ -0.9
NOLC1-201ENST00000370007 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.9
NOLC1-201ENST00000370007 ZFP91Q96JP5 570 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms