RNA–Protein interactions for RNA: ENST00000369893.9

SFXN2-201, Transcript of sideroflexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN2, Length 6,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-201ENST00000369893 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
SFXN2-201ENST00000369893 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
SFXN2-201ENST00000369893 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
SFXN2-201ENST00000369893 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
SFXN2-201ENST00000369893 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
SFXN2-201ENST00000369893 A0A0G2JS52 829 aa13.63□□□□□ -0.23
SFXN2-201ENST00000369893 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-201ENST00000369893 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
SFXN2-201ENST00000369893 PLCB2Q00722 1185 aa13.6□□□□□ -0.23
SFXN2-201ENST00000369893 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
SFXN2-201ENST00000369893 ZBTB7CA1YPR0 619 aa13.56□□□□□ -0.24
SFXN2-201ENST00000369893 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
SFXN2-201ENST00000369893 NRDCO43847 1150 aa13.54□□□□□ -0.24
SFXN2-201ENST00000369893 LAS1LQ9Y4W2 734 aaKnown RBP13.54□□□□□ -0.24
SFXN2-201ENST00000369893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.249e-8■□□□□ 10.2
SFXN2-201ENST00000369893 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
SFXN2-201ENST00000369893 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
SFXN2-201ENST00000369893 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
SFXN2-201ENST00000369893 MSNP26038 577 aaKnown RBP13.48□□□□□ -0.25
SFXN2-201ENST00000369893 FTSJ3Q8IY81 847 aaKnown RBP13.48□□□□□ -0.25
SFXN2-201ENST00000369893 MIER1Q8N108 512 aa13.48□□□□□ -0.25
SFXN2-201ENST00000369893 NOP58Q9Y2X3 529 aaKnown RBP13.48□□□□□ -0.25
SFXN2-201ENST00000369893 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
SFXN2-201ENST00000369893 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
SFXN2-201ENST00000369893 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
SFXN2-201ENST00000369893 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
SFXN2-201ENST00000369893 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
SFXN2-201ENST00000369893 L1TD1Q5T7N2 865 aaKnown RBP13.44□□□□□ -0.26
SFXN2-201ENST00000369893 DRC7Q8IY82 874 aa13.43□□□□□ -0.26
SFXN2-201ENST00000369893 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
SFXN2-201ENST00000369893 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
SFXN2-201ENST00000369893 FGD1P98174 961 aa13.42□□□□□ -0.26
SFXN2-201ENST00000369893 GOLGA6L4A6NEF3 574 aa13.41□□□□□ -0.26
SFXN2-201ENST00000369893 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
SFXN2-201ENST00000369893 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
SFXN2-201ENST00000369893 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
SFXN2-201ENST00000369893 CLSTN1O94985 981 aa13.4□□□□□ -0.26
SFXN2-201ENST00000369893 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
SFXN2-201ENST00000369893 RGS3P49796 1198 aa13.38□□□□□ -0.27
SFXN2-201ENST00000369893 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
SFXN2-201ENST00000369893 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
SFXN2-201ENST00000369893 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
SFXN2-201ENST00000369893 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
SFXN2-201ENST00000369893 KCNJ4P48050 445 aa13.37□□□□□ -0.27
SFXN2-201ENST00000369893 PNNQ9H307 717 aaKnown RBP13.37□□□□□ -0.27
SFXN2-201ENST00000369893 OS9Q13438 667 aaPredicted RBP13.36□□□□□ -0.27
SFXN2-201ENST00000369893 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
SFXN2-201ENST00000369893 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
SFXN2-201ENST00000369893 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
SFXN2-201ENST00000369893 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
SFXN2-201ENST00000369893 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
SFXN2-201ENST00000369893 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
SFXN2-201ENST00000369893 TSPY4P0CV99 314 aa13.34□□□□□ -0.27
SFXN2-201ENST00000369893 TSPY10P0CW01 314 aa13.34□□□□□ -0.27
SFXN2-201ENST00000369893 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.27
SFXN2-201ENST00000369893 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
SFXN2-201ENST00000369893 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
SFXN2-201ENST00000369893 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
SFXN2-201ENST00000369893 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
SFXN2-201ENST00000369893 NPHP1O15259 732 aa13.31□□□□□ -0.28
SFXN2-201ENST00000369893 KNSTRNQ9Y448 316 aa13.31□□□□□ -0.28
SFXN2-201ENST00000369893 FRAT1Q92837 279 aaPredicted RBP13.31□□□□□ -0.28
SFXN2-201ENST00000369893 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
SFXN2-201ENST00000369893 ARID3AQ99856 593 aa13.3□□□□□ -0.28
SFXN2-201ENST00000369893 MCCP23508 829 aa13.3□□□□□ -0.28
SFXN2-201ENST00000369893 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
SFXN2-201ENST00000369893 MS4A1P11836 297 aa13.29□□□□□ -0.28
SFXN2-201ENST00000369893 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
SFXN2-201ENST00000369893 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
SFXN2-201ENST00000369893 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
SFXN2-201ENST00000369893 CHMP7Q8WUX9 453 aaPredicted RBP13.28□□□□□ -0.28
SFXN2-201ENST00000369893 NACADO15069 1562 aa13.27□□□□□ -0.28
SFXN2-201ENST00000369893 PTMSP20962 102 aa13.27□□□□□ -0.29
SFXN2-201ENST00000369893 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
SFXN2-201ENST00000369893 GOLGA6L1Q8N7Z2 621 aa13.26□□□□□ -0.29
SFXN2-201ENST00000369893 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
SFXN2-201ENST00000369893 A0A0U1RQG5 324 aaPredicted RBP13.24□□□□□ -0.29
SFXN2-201ENST00000369893 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
SFXN2-201ENST00000369893 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
SFXN2-201ENST00000369893 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
SFXN2-201ENST00000369893 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
SFXN2-201ENST00000369893 GBP4Q96PP9 640 aa13.21□□□□□ -0.3
SFXN2-201ENST00000369893 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.3
SFXN2-201ENST00000369893 ISY1Q9ULR0 285 aaKnown RBP13.2□□□□□ -0.3
SFXN2-201ENST00000369893 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
SFXN2-201ENST00000369893 TPM4P67936 248 aa13.2□□□□□ -0.3
SFXN2-201ENST00000369893 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
SFXN2-201ENST00000369893 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
SFXN2-201ENST00000369893 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
SFXN2-201ENST00000369893 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
SFXN2-201ENST00000369893 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
SFXN2-201ENST00000369893 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
SFXN2-201ENST00000369893 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
SFXN2-201ENST00000369893 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
SFXN2-201ENST00000369893 GZF1Q9H116 711 aaPredicted RBP13.16□□□□□ -0.3
SFXN2-201ENST00000369893 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
SFXN2-201ENST00000369893 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
SFXN2-201ENST00000369893 PDE4CQ08493 712 aa13.14□□□□□ -0.31
SFXN2-201ENST00000369893 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
SFXN2-201ENST00000369893 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms