RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 CHD1O14646 1710 aa20.19■□□□□ 0.82
ECM1-202ENST00000369047 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
ECM1-202ENST00000369047 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
ECM1-202ENST00000369047 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
ECM1-202ENST00000369047 IGF1RP08069 1367 aa20.14■□□□□ 0.81
ECM1-202ENST00000369047 FBLN2P98095 1184 aa20.13■□□□□ 0.81
ECM1-202ENST00000369047 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
ECM1-202ENST00000369047 APLP2Q06481 763 aa20.07■□□□□ 0.8
ECM1-202ENST00000369047 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
ECM1-202ENST00000369047 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
ECM1-202ENST00000369047 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
ECM1-202ENST00000369047 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
ECM1-202ENST00000369047 NUP160Q12769 1436 aa20■□□□□ 0.79
ECM1-202ENST00000369047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
ECM1-202ENST00000369047 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
ECM1-202ENST00000369047 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
ECM1-202ENST00000369047 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
ECM1-202ENST00000369047 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
ECM1-202ENST00000369047 KIAA0586Q9BVV6 1533 aa19.88■□□□□ 0.77
ECM1-202ENST00000369047 ARHGAP35Q9NRY4 1499 aa19.86■□□□□ 0.77
ECM1-202ENST00000369047 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
ECM1-202ENST00000369047 CTTNBP2Q8WZ74 1663 aa19.83■□□□□ 0.77
ECM1-202ENST00000369047 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
ECM1-202ENST00000369047 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
ECM1-202ENST00000369047 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
ECM1-202ENST00000369047 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
ECM1-202ENST00000369047 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
ECM1-202ENST00000369047 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
ECM1-202ENST00000369047 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
ECM1-202ENST00000369047 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
ECM1-202ENST00000369047 PRG4Q92954 1404 aaPredicted RBP19.72■□□□□ 0.75
ECM1-202ENST00000369047 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
ECM1-202ENST00000369047 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
ECM1-202ENST00000369047 UGGT2Q9NYU1 1516 aa19.71■□□□□ 0.75
ECM1-202ENST00000369047 RRBP1Q9P2E9 1410 aaKnown RBP19.69■□□□□ 0.74
ECM1-202ENST00000369047 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
ECM1-202ENST00000369047 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
ECM1-202ENST00000369047 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
ECM1-202ENST00000369047 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
ECM1-202ENST00000369047 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
ECM1-202ENST00000369047 DISP1Q96F81 1524 aa19.59■□□□□ 0.73
ECM1-202ENST00000369047 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.72
ECM1-202ENST00000369047 SAMD9Q5K651 1589 aa19.56■□□□□ 0.72
ECM1-202ENST00000369047 LRRC9Q6ZRR7 1453 aa19.56■□□□□ 0.72
ECM1-202ENST00000369047 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
ECM1-202ENST00000369047 CFAP43Q8NDM7 1665 aa19.54■□□□□ 0.72
ECM1-202ENST00000369047 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
ECM1-202ENST00000369047 PTPRGP23470 1445 aa19.53■□□□□ 0.72
ECM1-202ENST00000369047 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
ECM1-202ENST00000369047 PCF11O94913 1555 aaKnown RBP19.51■□□□□ 0.71
ECM1-202ENST00000369047 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
ECM1-202ENST00000369047 FHOD3Q2V2M9 1422 aa19.49■□□□□ 0.71
ECM1-202ENST00000369047 P3H3Q8IVL6 736 aa19.48■□□□□ 0.71
ECM1-202ENST00000369047 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
ECM1-202ENST00000369047 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
ECM1-202ENST00000369047 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
ECM1-202ENST00000369047 UHRF1BP1LA0JNW5 1464 aa19.42■□□□□ 0.7
ECM1-202ENST00000369047 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
ECM1-202ENST00000369047 ABCC2Q92887 1545 aa19.4■□□□□ 0.7
ECM1-202ENST00000369047 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
ECM1-202ENST00000369047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.39■□□□□ 0.69
ECM1-202ENST00000369047 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
ECM1-202ENST00000369047 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.69
ECM1-202ENST00000369047 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
ECM1-202ENST00000369047 ABCA8O94911 1581 aa19.37■□□□□ 0.69
ECM1-202ENST00000369047 RAPGEF6Q8TEU7 1601 aa19.34■□□□□ 0.69
ECM1-202ENST00000369047 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
ECM1-202ENST00000369047 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
ECM1-202ENST00000369047 ITGAEP38570 1179 aa19.31■□□□□ 0.68
ECM1-202ENST00000369047 RAB3GAP2Q9H2M9 1393 aa19.3■□□□□ 0.68
ECM1-202ENST00000369047 KDM5BQ9UGL1 1544 aa19.3■□□□□ 0.68
ECM1-202ENST00000369047 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
ECM1-202ENST00000369047 MAPKBP1O60336 1514 aa19.28■□□□□ 0.68
ECM1-202ENST00000369047 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
ECM1-202ENST00000369047 HECW1Q76N89 1606 aa19.27■□□□□ 0.67
ECM1-202ENST00000369047 ZCCHC11Q5TAX3 1644 aaKnown RBP19.26■□□□□ 0.67
ECM1-202ENST00000369047 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
ECM1-202ENST00000369047 LRRIQ1Q96JM4 1722 aa19.24■□□□□ 0.67
ECM1-202ENST00000369047 FGD6Q6ZV73 1430 aa19.23■□□□□ 0.67
ECM1-202ENST00000369047 EHBP1L1Q8N3D4 1523 aa19.22■□□□□ 0.67
ECM1-202ENST00000369047 SUPT6HQ7KZ85 1726 aaKnown RBP19.21■□□□□ 0.67
ECM1-202ENST00000369047 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
ECM1-202ENST00000369047 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
ECM1-202ENST00000369047 ATP10BO94823 1461 aa19.17■□□□□ 0.66
ECM1-202ENST00000369047 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
ECM1-202ENST00000369047 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
ECM1-202ENST00000369047 WDR7Q9Y4E6 1490 aa19.14■□□□□ 0.65
ECM1-202ENST00000369047 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.65
ECM1-202ENST00000369047 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
ECM1-202ENST00000369047 TIMELESSQ9UNS1 1208 aa19.13■□□□□ 0.65
ECM1-202ENST00000369047 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
ECM1-202ENST00000369047 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
ECM1-202ENST00000369047 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
ECM1-202ENST00000369047 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
ECM1-202ENST00000369047 GLI2P10070 1586 aa19.1■□□□□ 0.65
ECM1-202ENST00000369047 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
ECM1-202ENST00000369047 HFM1A2PYH4 1435 aa19.08■□□□□ 0.65
ECM1-202ENST00000369047 ARID3CA6NKF2 412 aa19.08■□□□□ 0.64
ECM1-202ENST00000369047 CDK13Q14004 1512 aaKnown RBP19.07■□□□□ 0.64
ECM1-202ENST00000369047 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms