RNA–Protein interactions for RNA: ENST00000368891.9

C10orf88-201, Transcript of chromosome 10 open reading frame 88, humanhuman

TSL 2

Gene C10orf88, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf88-201ENST00000368891 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
C10orf88-201ENST00000368891 FHOD3Q2V2M9 1422 aa20.55■□□□□ 0.88
C10orf88-201ENST00000368891 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
C10orf88-201ENST00000368891 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.88
C10orf88-201ENST00000368891 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
C10orf88-201ENST00000368891 NESP48681 1621 aa20.51■□□□□ 0.87
C10orf88-201ENST00000368891 BCANQ96GW7 911 aa20.49■□□□□ 0.87
C10orf88-201ENST00000368891 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
C10orf88-201ENST00000368891 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
C10orf88-201ENST00000368891 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
C10orf88-201ENST00000368891 SETD5Q9C0A6 1442 aa20.43■□□□□ 0.86
C10orf88-201ENST00000368891 MAPKBP1O60336 1514 aa20.42■□□□□ 0.86
C10orf88-201ENST00000368891 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
C10orf88-201ENST00000368891 TIAM1Q13009 1591 aa20.41■□□□□ 0.86
C10orf88-201ENST00000368891 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
C10orf88-201ENST00000368891 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
C10orf88-201ENST00000368891 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
C10orf88-201ENST00000368891 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
C10orf88-201ENST00000368891 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
C10orf88-201ENST00000368891 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
C10orf88-201ENST00000368891 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
C10orf88-201ENST00000368891 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
C10orf88-201ENST00000368891 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
C10orf88-201ENST00000368891 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
C10orf88-201ENST00000368891 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
C10orf88-201ENST00000368891 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
C10orf88-201ENST00000368891 FKBP8Q14318 412 aa20.22■□□□□ 0.83
C10orf88-201ENST00000368891 FOXD1Q16676 465 aa20.2■□□□□ 0.82
C10orf88-201ENST00000368891 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
C10orf88-201ENST00000368891 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
C10orf88-201ENST00000368891 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
C10orf88-201ENST00000368891 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
C10orf88-201ENST00000368891 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.82
C10orf88-201ENST00000368891 CASKIN1Q8WXD9 1431 aa20.14■□□□□ 0.82
C10orf88-201ENST00000368891 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
C10orf88-201ENST00000368891 DNMBPQ6XZF7 1577 aa20.13■□□□□ 0.81
C10orf88-201ENST00000368891 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
C10orf88-201ENST00000368891 ANP32CO43423 234 aa20.12■□□□□ 0.81
C10orf88-201ENST00000368891 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
C10orf88-201ENST00000368891 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
C10orf88-201ENST00000368891 FYCO1Q9BQS8 1478 aa20.1■□□□□ 0.81
C10orf88-201ENST00000368891 CCDC18Q5T9S5 1454 aa20.09■□□□□ 0.81
C10orf88-201ENST00000368891 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.8
C10orf88-201ENST00000368891 FMN1Q68DA7 1419 aa20.07■□□□□ 0.8
C10orf88-201ENST00000368891 CFAP43Q8NDM7 1665 aa20.06■□□□□ 0.8
C10orf88-201ENST00000368891 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
C10orf88-201ENST00000368891 NCOA2Q15596 1464 aa20.04■□□□□ 0.8
C10orf88-201ENST00000368891 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
C10orf88-201ENST00000368891 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
C10orf88-201ENST00000368891 NAIPQ13075 1403 aa19.99■□□□□ 0.79
C10orf88-201ENST00000368891 ZNF644Q9H582 1327 aaPredicted RBP19.98■□□□□ 0.79
C10orf88-201ENST00000368891 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
C10orf88-201ENST00000368891 HNRNPUQ00839 825 aaKnown RBP eCLIP19.97■□□□□ 0.79
C10orf88-201ENST00000368891 HSPA5P11021 654 aaKnown RBP19.97■□□□□ 0.79
C10orf88-201ENST00000368891 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
C10orf88-201ENST00000368891 CCDC184Q52MB2 194 aa19.95■□□□□ 0.78
C10orf88-201ENST00000368891 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
C10orf88-201ENST00000368891 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
C10orf88-201ENST00000368891 UACAQ9BZF9 1416 aa19.94■□□□□ 0.78
C10orf88-201ENST00000368891 NEFLP07196 543 aa19.94■□□□□ 0.78
C10orf88-201ENST00000368891 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
C10orf88-201ENST00000368891 TIMELESSQ9UNS1 1208 aa19.93■□□□□ 0.78
C10orf88-201ENST00000368891 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
C10orf88-201ENST00000368891 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
C10orf88-201ENST00000368891 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
C10orf88-201ENST00000368891 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
C10orf88-201ENST00000368891 C11orf95C9JLR9 678 aaPredicted RBP19.91■□□□□ 0.78
C10orf88-201ENST00000368891 FBLN2P98095 1184 aa19.91■□□□□ 0.78
C10orf88-201ENST00000368891 WASHC2AQ641Q2 1341 aa19.91■□□□□ 0.78
C10orf88-201ENST00000368891 CUL7Q14999 1698 aa19.91■□□□□ 0.78
C10orf88-201ENST00000368891 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
C10orf88-201ENST00000368891 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
C10orf88-201ENST00000368891 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
C10orf88-201ENST00000368891 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
C10orf88-201ENST00000368891 GRIN2BQ13224 1484 aa19.9■□□□□ 0.78
C10orf88-201ENST00000368891 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
C10orf88-201ENST00000368891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.87■□□□□ 0.779e-8■■■□□ 15.5
C10orf88-201ENST00000368891 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
C10orf88-201ENST00000368891 CCER2I3L3R5 266 aa19.86■□□□□ 0.77
C10orf88-201ENST00000368891 KDM6BO15054 1643 aa19.85■□□□□ 0.77
C10orf88-201ENST00000368891 NBPF8Q3BBV2 869 aa19.82■□□□□ 0.76
C10orf88-201ENST00000368891 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
C10orf88-201ENST00000368891 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
C10orf88-201ENST00000368891 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
C10orf88-201ENST00000368891 DENND4BO75064 1496 aaPredicted RBP19.8■□□□□ 0.76
C10orf88-201ENST00000368891 SAMD9Q5K651 1589 aa19.8■□□□□ 0.76
C10orf88-201ENST00000368891 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
C10orf88-201ENST00000368891 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
C10orf88-201ENST00000368891 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
C10orf88-201ENST00000368891 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
C10orf88-201ENST00000368891 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.76
C10orf88-201ENST00000368891 UGGT2Q9NYU1 1516 aa19.76■□□□□ 0.75
C10orf88-201ENST00000368891 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
C10orf88-201ENST00000368891 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
C10orf88-201ENST00000368891 EHBP1L1Q8N3D4 1523 aa19.75■□□□□ 0.75
C10orf88-201ENST00000368891 RBM19Q9Y4C8 960 aaKnown RBP19.74■□□□□ 0.75
C10orf88-201ENST00000368891 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
C10orf88-201ENST00000368891 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
C10orf88-201ENST00000368891 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
C10orf88-201ENST00000368891 IQGAP2Q13576 1575 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms