RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
SLC39A1-204ENST00000368623 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.14
SLC39A1-204ENST00000368623 TOPBP1Q92547 1522 aa22.14■■□□□ 1.13
SLC39A1-204ENST00000368623 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.13
SLC39A1-204ENST00000368623 PHLDB1Q86UU1 1377 aa22.14■■□□□ 1.13
SLC39A1-204ENST00000368623 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
SLC39A1-204ENST00000368623 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
SLC39A1-204ENST00000368623 LRRC9Q6ZRR7 1453 aa22.12■■□□□ 1.13
SLC39A1-204ENST00000368623 DNMBPQ6XZF7 1577 aa22.11■■□□□ 1.13
SLC39A1-204ENST00000368623 PCF11O94913 1555 aaKnown RBP22.09■■□□□ 1.13
SLC39A1-204ENST00000368623 ABCA10Q8WWZ4 1543 aa22.07■■□□□ 1.12
SLC39A1-204ENST00000368623 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
SLC39A1-204ENST00000368623 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
SLC39A1-204ENST00000368623 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
SLC39A1-204ENST00000368623 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
SLC39A1-204ENST00000368623 MYT1Q01538 1121 aa21.99■■□□□ 1.11
SLC39A1-204ENST00000368623 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
SLC39A1-204ENST00000368623 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
SLC39A1-204ENST00000368623 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
SLC39A1-204ENST00000368623 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
SLC39A1-204ENST00000368623 CUL7Q14999 1698 aa21.9■■□□□ 1.1
SLC39A1-204ENST00000368623 FYCO1Q9BQS8 1478 aa21.89■■□□□ 1.1
SLC39A1-204ENST00000368623 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
SLC39A1-204ENST00000368623 CTTNBP2Q8WZ74 1663 aa21.89■■□□□ 1.09
SLC39A1-204ENST00000368623 EFCAB5A4FU69 1503 aa21.87■■□□□ 1.09
SLC39A1-204ENST00000368623 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
SLC39A1-204ENST00000368623 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
SLC39A1-204ENST00000368623 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
SLC39A1-204ENST00000368623 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
SLC39A1-204ENST00000368623 HIRIP3Q9BW71 556 aaPredicted RBP21.81■■□□□ 1.08
SLC39A1-204ENST00000368623 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
SLC39A1-204ENST00000368623 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
SLC39A1-204ENST00000368623 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
SLC39A1-204ENST00000368623 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
SLC39A1-204ENST00000368623 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
SLC39A1-204ENST00000368623 SUPT16HQ9Y5B9 1047 aaKnown RBP21.79■■□□□ 1.08
SLC39A1-204ENST00000368623 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
SLC39A1-204ENST00000368623 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.082e-6■■■■■ 26.9
SLC39A1-204ENST00000368623 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
SLC39A1-204ENST00000368623 ARID3CA6NKF2 412 aa21.76■■□□□ 1.07
SLC39A1-204ENST00000368623 PTPRKQ15262 1439 aa21.74■■□□□ 1.07
SLC39A1-204ENST00000368623 LRRIQ1Q96JM4 1722 aa21.74■■□□□ 1.07
SLC39A1-204ENST00000368623 DDX10Q13206 875 aaKnown RBP21.72■■□□□ 1.07
SLC39A1-204ENST00000368623 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
SLC39A1-204ENST00000368623 BCANQ96GW7 911 aa21.7■■□□□ 1.06
SLC39A1-204ENST00000368623 NCOA2Q15596 1464 aa21.68■■□□□ 1.06
SLC39A1-204ENST00000368623 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
SLC39A1-204ENST00000368623 CCDC18Q5T9S5 1454 aa21.65■■□□□ 1.06
SLC39A1-204ENST00000368623 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
SLC39A1-204ENST00000368623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.65■■□□□ 1.06
SLC39A1-204ENST00000368623 CHIC2Q9UKJ5 165 aa21.64■■□□□ 1.06
SLC39A1-204ENST00000368623 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
SLC39A1-204ENST00000368623 MYOM3Q5VTT5 1437 aa21.62■■□□□ 1.05
SLC39A1-204ENST00000368623 MAGI3Q5TCQ9 1506 aa21.62■■□□□ 1.05
SLC39A1-204ENST00000368623 RRP7BPQ9NSQ0 103 aa21.62■■□□□ 1.05
SLC39A1-204ENST00000368623 TSHZ2Q9NRE2 1034 aa21.6■■□□□ 1.05
SLC39A1-204ENST00000368623 HFM1A2PYH4 1435 aa21.59■■□□□ 1.05
SLC39A1-204ENST00000368623 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
SLC39A1-204ENST00000368623 NAIPQ13075 1403 aa21.57■■□□□ 1.04
SLC39A1-204ENST00000368623 PTPN23Q9H3S7 1636 aa21.57■■□□□ 1.04
SLC39A1-204ENST00000368623 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
SLC39A1-204ENST00000368623 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
SLC39A1-204ENST00000368623 EHBP1L1Q8N3D4 1523 aa21.53■■□□□ 1.04
SLC39A1-204ENST00000368623 CDK13Q14004 1512 aaKnown RBP21.53■■□□□ 1.04
SLC39A1-204ENST00000368623 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
SLC39A1-204ENST00000368623 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
SLC39A1-204ENST00000368623 UGGT2Q9NYU1 1516 aa21.51■■□□□ 1.03
SLC39A1-204ENST00000368623 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
SLC39A1-204ENST00000368623 IQGAP2Q13576 1575 aa21.5■■□□□ 1.03
SLC39A1-204ENST00000368623 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
SLC39A1-204ENST00000368623 TRIM52Q96A61 297 aa21.48■■□□□ 1.03
SLC39A1-204ENST00000368623 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
SLC39A1-204ENST00000368623 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
SLC39A1-204ENST00000368623 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
SLC39A1-204ENST00000368623 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
SLC39A1-204ENST00000368623 HECW1Q76N89 1606 aa21.44■■□□□ 1.02
SLC39A1-204ENST00000368623 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SLC39A1-204ENST00000368623 KDM6BO15054 1643 aa21.41■■□□□ 1.02
SLC39A1-204ENST00000368623 FKBP8Q14318 412 aa21.4■■□□□ 1.02
SLC39A1-204ENST00000368623 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
SLC39A1-204ENST00000368623 WDR62O43379 1518 aa21.38■■□□□ 1.01
SLC39A1-204ENST00000368623 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
SLC39A1-204ENST00000368623 DENND4BO75064 1496 aaPredicted RBP21.37■■□□□ 1.01
SLC39A1-204ENST00000368623 ANP32CO43423 234 aa21.37■■□□□ 1.01
SLC39A1-204ENST00000368623 TCOF1Q13428 1488 aaKnown RBP21.35■■□□□ 1.01
SLC39A1-204ENST00000368623 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
SLC39A1-204ENST00000368623 FBLN2P98095 1184 aa21.32■■□□□ 1
SLC39A1-204ENST00000368623 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
SLC39A1-204ENST00000368623 DISP1Q96F81 1524 aa21.31■■□□□ 1
SLC39A1-204ENST00000368623 IFT140Q96RY7 1462 aa21.31■■□□□ 1
SLC39A1-204ENST00000368623 GCC2Q8IWJ2 1684 aa21.28■■□□□ 1
SLC39A1-204ENST00000368623 NUP153P49790 1475 aaKnown RBP21.27■■□□□ 1
SLC39A1-204ENST00000368623 MIA2Q96PC5 1412 aa21.27■■□□□ 1
SLC39A1-204ENST00000368623 KIAA0556O60303 1618 aa21.27■■□□□ 1
SLC39A1-204ENST00000368623 HSPA5P11021 654 aaKnown RBP21.27■□□□□ 0.99
SLC39A1-204ENST00000368623 KIAA0586Q9BVV6 1533 aa21.26■□□□□ 0.99
SLC39A1-204ENST00000368623 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
SLC39A1-204ENST00000368623 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
SLC39A1-204ENST00000368623 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
SLC39A1-204ENST00000368623 CCER2I3L3R5 266 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms