RNA–Protein interactions for RNA: ENST00000367696.6

RC3H1-203, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RC3H1, Length 11,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-203ENST00000367696 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
RC3H1-203ENST00000367696 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
RC3H1-203ENST00000367696 BAZ1BQ9UIG0 1483 aaKnown RBP11.15□□□□□ -0.62
RC3H1-203ENST00000367696 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
RC3H1-203ENST00000367696 TSPY4P0CV99 314 aa11.13□□□□□ -0.63
RC3H1-203ENST00000367696 TSPY10P0CW01 314 aa11.13□□□□□ -0.63
RC3H1-203ENST00000367696 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
RC3H1-203ENST00000367696 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
RC3H1-203ENST00000367696 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
RC3H1-203ENST00000367696 CARMIL1Q5VZK9 1371 aa11.09□□□□□ -0.63
RC3H1-203ENST00000367696 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
RC3H1-203ENST00000367696 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
RC3H1-203ENST00000367696 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
RC3H1-203ENST00000367696 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
RC3H1-203ENST00000367696 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
RC3H1-203ENST00000367696 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
RC3H1-203ENST00000367696 RBM19Q9Y4C8 960 aaKnown RBP11.05□□□□□ -0.64
RC3H1-203ENST00000367696 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
RC3H1-203ENST00000367696 NBR1Q14596 966 aa11.04□□□□□ -0.64
RC3H1-203ENST00000367696 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
RC3H1-203ENST00000367696 ABCC8Q09428 1581 aa11.02□□□□□ -0.64
RC3H1-203ENST00000367696 NEFMP07197 916 aa11.01□□□□□ -0.65
RC3H1-203ENST00000367696 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
RC3H1-203ENST00000367696 CUX2O14529 1486 aa11□□□□□ -0.65
RC3H1-203ENST00000367696 UPF2Q9HAU5 1272 aaKnown RBP11□□□□□ -0.65
RC3H1-203ENST00000367696 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
RC3H1-203ENST00000367696 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
RC3H1-203ENST00000367696 HSPA5P11021 654 aaKnown RBP10.99□□□□□ -0.65
RC3H1-203ENST00000367696 CFDP1Q9UEE9 299 aaPredicted RBP10.99□□□□□ -0.65
RC3H1-203ENST00000367696 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
RC3H1-203ENST00000367696 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
RC3H1-203ENST00000367696 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
RC3H1-203ENST00000367696 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
RC3H1-203ENST00000367696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.654e-7■■□□□ 13
RC3H1-203ENST00000367696 RUSC2Q8N2Y8 1516 aa10.96□□□□□ -0.66
RC3H1-203ENST00000367696 NOP58Q9Y2X3 529 aaKnown RBP10.96□□□□□ -0.66
RC3H1-203ENST00000367696 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
RC3H1-203ENST00000367696 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
RC3H1-203ENST00000367696 CDCA8Q53HL2 280 aa10.92□□□□□ -0.66
RC3H1-203ENST00000367696 EIF5BO60841 1220 aaKnown RBP10.91□□□□□ -0.66
RC3H1-203ENST00000367696 ARHGAP35Q9NRY4 1499 aa10.91□□□□□ -0.66
RC3H1-203ENST00000367696 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
RC3H1-203ENST00000367696 RGL3Q3MIN7 710 aa10.89□□□□□ -0.67
RC3H1-203ENST00000367696 MPHOSPH9Q99550 1183 aa10.89□□□□□ -0.67
RC3H1-203ENST00000367696 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
RC3H1-203ENST00000367696 BCL11AQ9H165 835 aa10.88□□□□□ -0.67
RC3H1-203ENST00000367696 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
RC3H1-203ENST00000367696 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
RC3H1-203ENST00000367696 SENP3-EIF4A1A0A087X0R7 540 aa10.87□□□□□ -0.67
RC3H1-203ENST00000367696 BECN1Q14457 450 aa10.87□□□□□ -0.67
RC3H1-203ENST00000367696 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
RC3H1-203ENST00000367696 KNSTRNQ9Y448 316 aa10.86□□□□□ -0.67
RC3H1-203ENST00000367696 ANP32BQ92688 251 aaKnown RBP10.86□□□□□ -0.67
RC3H1-203ENST00000367696 WIZO95785 1651 aa10.86□□□□□ -0.67
RC3H1-203ENST00000367696 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
RC3H1-203ENST00000367696 HSP90AA1P07900 732 aaKnown RBP10.85□□□□□ -0.67
RC3H1-203ENST00000367696 NUDCQ9Y266 331 aa10.84□□□□□ -0.67
RC3H1-203ENST00000367696 DEKP35659 375 aaKnown RBP10.83□□□□□ -0.68
RC3H1-203ENST00000367696 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
RC3H1-203ENST00000367696 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
RC3H1-203ENST00000367696 PKD2Q13563 968 aa10.82□□□□□ -0.68
RC3H1-203ENST00000367696 RALBP1Q15311 655 aa10.82□□□□□ -0.68
RC3H1-203ENST00000367696 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
RC3H1-203ENST00000367696 LAS1LQ9Y4W2 734 aaKnown RBP10.81□□□□□ -0.68
RC3H1-203ENST00000367696 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
RC3H1-203ENST00000367696 TMF1P82094 1093 aa10.81□□□□□ -0.68
RC3H1-203ENST00000367696 PRKRIP1Q9H875 184 aaPredicted RBP10.8□□□□□ -0.68
RC3H1-203ENST00000367696 PDE3BQ13370 1112 aa10.8□□□□□ -0.68
RC3H1-203ENST00000367696 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
RC3H1-203ENST00000367696 FANCIQ9NVI1 1328 aa10.79□□□□□ -0.68
RC3H1-203ENST00000367696 IGF1RP08069 1367 aa10.79□□□□□ -0.68
RC3H1-203ENST00000367696 FOXD1Q16676 465 aa10.79□□□□□ -0.68
RC3H1-203ENST00000367696 NPM1P06748 294 aaKnown RBP eCLIP10.79□□□□□ -0.68
RC3H1-203ENST00000367696 RCAN3Q9UKA8 241 aa10.79□□□□□ -0.68
RC3H1-203ENST00000367696 FHOD3Q2V2M9 1422 aa10.78□□□□□ -0.68
RC3H1-203ENST00000367696 TDRD9Q8NDG6 1382 aaKnown RBP10.78□□□□□ -0.68
RC3H1-203ENST00000367696 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.69
RC3H1-203ENST00000367696 RGS3P49796 1198 aa10.77□□□□□ -0.69
RC3H1-203ENST00000367696 IPO9Q96P70 1041 aaKnown RBP10.76□□□□□ -0.69
RC3H1-203ENST00000367696 NLRP13Q86W25 1043 aa10.76□□□□□ -0.69
RC3H1-203ENST00000367696 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
RC3H1-203ENST00000367696 CC2D1BQ5T0F9 858 aaKnown RBP10.75□□□□□ -0.69
RC3H1-203ENST00000367696 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
RC3H1-203ENST00000367696 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
RC3H1-203ENST00000367696 STAG3Q9UJ98 1225 aa10.74□□□□□ -0.69
RC3H1-203ENST00000367696 SMARCA4P51532 1647 aa10.74□□□□□ -0.69
RC3H1-203ENST00000367696 KIF21BO75037 1637 aa10.73□□□□□ -0.69
RC3H1-203ENST00000367696 ANKRD30AQ9BXX3 1397 aa10.73□□□□□ -0.69
RC3H1-203ENST00000367696 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
RC3H1-203ENST00000367696 MS4A1P11836 297 aa10.73□□□□□ -0.69
RC3H1-203ENST00000367696 NUP155O75694 1391 aa10.72□□□□□ -0.69
RC3H1-203ENST00000367696 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
RC3H1-203ENST00000367696 MYH16Q9H6N6 1097 aa10.71□□□□□ -0.69
RC3H1-203ENST00000367696 GOLGA6L22H0YM25 854 aa10.7□□□□□ -0.7
RC3H1-203ENST00000367696 ARXQ96QS3 562 aa10.69□□□□□ -0.7
RC3H1-203ENST00000367696 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
RC3H1-203ENST00000367696 FRAT1Q92837 279 aaPredicted RBP10.69□□□□□ -0.7
RC3H1-203ENST00000367696 PDS5BQ9NTI5 1447 aa10.69□□□□□ -0.7
RC3H1-203ENST00000367696 RSPH4AQ5TD94 716 aa10.68□□□□□ -0.7
RC3H1-203ENST00000367696 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms