RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.79
VTA1-202ENST00000367630 SYNJ1O43426 1573 aa10.14□□□□□ -0.79
VTA1-202ENST00000367630 FYCO1Q9BQS8 1478 aa10.13□□□□□ -0.79
VTA1-202ENST00000367630 RRBP1Q9P2E9 1410 aaKnown RBP10.13□□□□□ -0.79
VTA1-202ENST00000367630 ERICH6BQ5W0A0 696 aa10.12□□□□□ -0.79
VTA1-202ENST00000367630 THOC2Q8NI27 1593 aaKnown RBP10.11□□□□□ -0.79
VTA1-202ENST00000367630 CCER2I3L3R5 266 aa10.1□□□□□ -0.79
VTA1-202ENST00000367630 GTF3C3Q9Y5Q9 886 aa10.1□□□□□ -0.79
VTA1-202ENST00000367630 DNMBPQ6XZF7 1577 aa10.1□□□□□ -0.79
VTA1-202ENST00000367630 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
VTA1-202ENST00000367630 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
VTA1-202ENST00000367630 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
VTA1-202ENST00000367630 LAMC3Q9Y6N6 1575 aa10.07□□□□□ -0.8
VTA1-202ENST00000367630 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
VTA1-202ENST00000367630 CASKIN1Q8WXD9 1431 aa10.06□□□□□ -0.8
VTA1-202ENST00000367630 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
VTA1-202ENST00000367630 EHBP1L1Q8N3D4 1523 aa10.04□□□□□ -0.8
VTA1-202ENST00000367630 TIAM1Q13009 1591 aa10.02□□□□□ -0.8
VTA1-202ENST00000367630 ITGAEP38570 1179 aa10.02□□□□□ -0.8
VTA1-202ENST00000367630 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
VTA1-202ENST00000367630 FGD5Q6ZNL6 1462 aa10.01□□□□□ -0.81
VTA1-202ENST00000367630 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
VTA1-202ENST00000367630 ABCA10Q8WWZ4 1543 aa10.01□□□□□ -0.81
VTA1-202ENST00000367630 CARMIL2Q6F5E8 1435 aa10□□□□□ -0.81
VTA1-202ENST00000367630 HECW1Q76N89 1606 aa10□□□□□ -0.81
VTA1-202ENST00000367630 LRRC9Q6ZRR7 1453 aa9.99□□□□□ -0.81
VTA1-202ENST00000367630 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
VTA1-202ENST00000367630 DHX57Q6P158 1386 aaKnown RBP9.97□□□□□ -0.81
VTA1-202ENST00000367630 ROCK2O75116 1388 aaKnown RBP9.96□□□□□ -0.81
VTA1-202ENST00000367630 EIF4G2P78344 907 aaKnown RBP eCLIP9.96□□□□□ -0.81
VTA1-202ENST00000367630 MIA2Q96PC5 1412 aa9.96□□□□□ -0.82
VTA1-202ENST00000367630 IGF1RP08069 1367 aa9.95□□□□□ -0.82
VTA1-202ENST00000367630 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
VTA1-202ENST00000367630 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
VTA1-202ENST00000367630 CFAP43Q8NDM7 1665 aa9.95□□□□□ -0.82
VTA1-202ENST00000367630 AKNAQ7Z591 1439 aa9.95□□□□□ -0.82
VTA1-202ENST00000367630 RAB3GAP2Q9H2M9 1393 aa9.93□□□□□ -0.82
VTA1-202ENST00000367630 NEUROD1Q13562 356 aa9.93□□□□□ -0.82
VTA1-202ENST00000367630 DAXXQ9UER7 740 aaPredicted RBP9.93□□□□□ -0.82
VTA1-202ENST00000367630 SCAF1Q9H7N4 1312 aaKnown RBP9.93□□□□□ -0.82
VTA1-202ENST00000367630 RUSC2Q8N2Y8 1516 aa9.93□□□□□ -0.82
VTA1-202ENST00000367630 MYOM3Q5VTT5 1437 aa9.92□□□□□ -0.82
VTA1-202ENST00000367630 UACAQ9BZF9 1416 aa9.92□□□□□ -0.82
VTA1-202ENST00000367630 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
VTA1-202ENST00000367630 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
VTA1-202ENST00000367630 CTTNBP2Q8WZ74 1663 aa9.91□□□□□ -0.82
VTA1-202ENST00000367630 EIF5BO60841 1220 aaKnown RBP9.91□□□□□ -0.82
VTA1-202ENST00000367630 IFT140Q96RY7 1462 aa9.9□□□□□ -0.82
VTA1-202ENST00000367630 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
VTA1-202ENST00000367630 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.82
VTA1-202ENST00000367630 TOPBP1Q92547 1522 aa9.9□□□□□ -0.83
VTA1-202ENST00000367630 TSPY4P0CV99 314 aa9.89□□□□□ -0.83
VTA1-202ENST00000367630 TSPY10P0CW01 314 aa9.89□□□□□ -0.83
VTA1-202ENST00000367630 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
VTA1-202ENST00000367630 RTL5Q5HYW3 569 aaPredicted RBP9.88□□□□□ -0.83
VTA1-202ENST00000367630 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
VTA1-202ENST00000367630 MIER1Q8N108 512 aa9.87□□□□□ -0.83
VTA1-202ENST00000367630 MRC2Q9UBG0 1479 aa9.87□□□□□ -0.83
VTA1-202ENST00000367630 ANKRD30AQ9BXX3 1397 aa9.87□□□□□ -0.83
VTA1-202ENST00000367630 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.86□□□□□ -0.83
VTA1-202ENST00000367630 PHLDB1Q86UU1 1377 aa9.86□□□□□ -0.83
VTA1-202ENST00000367630 HFM1A2PYH4 1435 aa9.85□□□□□ -0.83
VTA1-202ENST00000367630 ROCK1Q13464 1354 aa9.85□□□□□ -0.83
VTA1-202ENST00000367630 PLEKHD1A6NEE1 506 aa9.85□□□□□ -0.83
VTA1-202ENST00000367630 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
VTA1-202ENST00000367630 PLEKHH2Q8IVE3 1493 aa9.83□□□□□ -0.84
VTA1-202ENST00000367630 ERCC6Q03468 1493 aa9.82□□□□□ -0.84
VTA1-202ENST00000367630 POLA1P09884 1462 aaPredicted RBP9.82□□□□□ -0.84
VTA1-202ENST00000367630 CHMP7Q8WUX9 453 aaPredicted RBP9.82□□□□□ -0.84
VTA1-202ENST00000367630 PPP1R15AO75807 674 aaPredicted RBP9.81□□□□□ -0.84
VTA1-202ENST00000367630 FHOD3Q2V2M9 1422 aa9.81□□□□□ -0.84
VTA1-202ENST00000367630 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
VTA1-202ENST00000367630 IQGAP2Q13576 1575 aa9.8□□□□□ -0.84
VTA1-202ENST00000367630 NCOA2Q15596 1464 aa9.8□□□□□ -0.84
VTA1-202ENST00000367630 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
VTA1-202ENST00000367630 ITSN2Q9NZM3 1697 aa9.79□□□□□ -0.84
VTA1-202ENST00000367630 CFDP1Q9UEE9 299 aaPredicted RBP9.78□□□□□ -0.84
VTA1-202ENST00000367630 SLC4A1APQ9BWU0 796 aaKnown RBP9.78□□□□□ -0.84
VTA1-202ENST00000367630 PPP4R2Q9NY27 417 aa9.78□□□□□ -0.84
VTA1-202ENST00000367630 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.84
VTA1-202ENST00000367630 KANK4Q5T7N3 995 aaPredicted RBP9.77□□□□□ -0.85
VTA1-202ENST00000367630 NGEFQ8N5V2 710 aa9.77□□□□□ -0.85
VTA1-202ENST00000367630 DDX10Q13206 875 aaKnown RBP9.77□□□□□ -0.85
VTA1-202ENST00000367630 SCAPERQ9BY12 1400 aa9.77□□□□□ -0.85
VTA1-202ENST00000367630 RALBP1Q15311 655 aa9.77□□□□□ -0.85
VTA1-202ENST00000367630 MAGI1Q96QZ7 1491 aaPredicted RBP9.76□□□□□ -0.85
VTA1-202ENST00000367630 KANK1Q14678 1352 aa9.76□□□□□ -0.85
VTA1-202ENST00000367630 KIAA0586Q9BVV6 1533 aa9.76□□□□□ -0.85
VTA1-202ENST00000367630 TCOF1Q13428 1488 aaKnown RBP9.76□□□□□ -0.85
VTA1-202ENST00000367630 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
VTA1-202ENST00000367630 PDE3BQ13370 1112 aa9.75□□□□□ -0.85
VTA1-202ENST00000367630 HNRNPUQ00839 825 aaKnown RBP eCLIP9.75□□□□□ -0.85
VTA1-202ENST00000367630 FKBP8Q14318 412 aa9.74□□□□□ -0.85
VTA1-202ENST00000367630 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
VTA1-202ENST00000367630 ANP32EQ9BTT0 268 aa9.73□□□□□ -0.85
VTA1-202ENST00000367630 CNTLNQ9NXG0 1405 aa9.73□□□□□ -0.85
VTA1-202ENST00000367630 NESP48681 1621 aa9.72□□□□□ -0.85
VTA1-202ENST00000367630 MRS2Q9HD23 443 aa9.72□□□□□ -0.85
VTA1-202ENST00000367630 SAMD9Q5K651 1589 aa9.72□□□□□ -0.85
VTA1-202ENST00000367630 TMC1Q8TDI8 760 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms