RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
VTA1-201ENST00000367621 FOXD4L1Q9NU39 408 aa15.62■□□□□ 0.09
VTA1-201ENST00000367621 POLA1P09884 1462 aaPredicted RBP15.62■□□□□ 0.09
VTA1-201ENST00000367621 EEA1Q15075 1411 aa15.61■□□□□ 0.09
VTA1-201ENST00000367621 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
VTA1-201ENST00000367621 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
VTA1-201ENST00000367621 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
VTA1-201ENST00000367621 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
VTA1-201ENST00000367621 WDR62O43379 1518 aa15.56■□□□□ 0.08
VTA1-201ENST00000367621 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
VTA1-201ENST00000367621 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
VTA1-201ENST00000367621 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
VTA1-201ENST00000367621 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
VTA1-201ENST00000367621 CUX2O14529 1486 aa15.52■□□□□ 0.08
VTA1-201ENST00000367621 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
VTA1-201ENST00000367621 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
VTA1-201ENST00000367621 IGF1RP08069 1367 aa15.49■□□□□ 0.07
VTA1-201ENST00000367621 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.07
VTA1-201ENST00000367621 PRXQ9BXM0 1461 aa15.46■□□□□ 0.06
VTA1-201ENST00000367621 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
VTA1-201ENST00000367621 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
VTA1-201ENST00000367621 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
VTA1-201ENST00000367621 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
VTA1-201ENST00000367621 KIF21BO75037 1637 aa15.39■□□□□ 0.05
VTA1-201ENST00000367621 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
VTA1-201ENST00000367621 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
VTA1-201ENST00000367621 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
VTA1-201ENST00000367621 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
VTA1-201ENST00000367621 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
VTA1-201ENST00000367621 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
VTA1-201ENST00000367621 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
VTA1-201ENST00000367621 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.05
VTA1-201ENST00000367621 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
VTA1-201ENST00000367621 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
VTA1-201ENST00000367621 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
VTA1-201ENST00000367621 GRIN2BQ13224 1484 aa15.28■□□□□ 0.04
VTA1-201ENST00000367621 ZBTB22O15209 634 aa15.26■□□□□ 0.03
VTA1-201ENST00000367621 ATXN8OSP0DMR3 200 aa15.25■□□□□ 0.03
VTA1-201ENST00000367621 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
VTA1-201ENST00000367621 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
VTA1-201ENST00000367621 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
VTA1-201ENST00000367621 CUL7Q14999 1698 aa15.22■□□□□ 0.03
VTA1-201ENST00000367621 PIP4P2Q8N4L2 257 aa15.22■□□□□ 0.03
VTA1-201ENST00000367621 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
VTA1-201ENST00000367621 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
VTA1-201ENST00000367621 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
VTA1-201ENST00000367621 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
VTA1-201ENST00000367621 CLIP1P30622 1438 aa15.16■□□□□ 0.02
VTA1-201ENST00000367621 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
VTA1-201ENST00000367621 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
VTA1-201ENST00000367621 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
VTA1-201ENST00000367621 SYNJ2O15056 1496 aa15.11■□□□□ 0.01
VTA1-201ENST00000367621 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
VTA1-201ENST00000367621 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
VTA1-201ENST00000367621 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0
VTA1-201ENST00000367621 CHMP7Q8WUX9 453 aaPredicted RBP15.07■□□□□ 0
VTA1-201ENST00000367621 ARAP1Q96P48 1450 aa15.06■□□□□ 0
VTA1-201ENST00000367621 NUP160Q12769 1436 aa15.03■□□□□ -0
VTA1-201ENST00000367621 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
VTA1-201ENST00000367621 SPDYE6P0CI01 402 aa15.03■□□□□ -0
VTA1-201ENST00000367621 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
VTA1-201ENST00000367621 FBLN2P98095 1184 aa15.02■□□□□ -0
VTA1-201ENST00000367621 KIAA0586Q9BVV6 1533 aa15.02□□□□□ -0.01
VTA1-201ENST00000367621 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
VTA1-201ENST00000367621 CEP170Q5SW79 1584 aa14.99□□□□□ -0.01
VTA1-201ENST00000367621 HAX1O00165 279 aa14.98□□□□□ -0.01
VTA1-201ENST00000367621 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
VTA1-201ENST00000367621 IQGAP2Q13576 1575 aa14.96□□□□□ -0.01
VTA1-201ENST00000367621 P3H3Q8IVL6 736 aa14.96□□□□□ -0.01
VTA1-201ENST00000367621 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
VTA1-201ENST00000367621 UGGT2Q9NYU1 1516 aa14.95□□□□□ -0.02
VTA1-201ENST00000367621 FHOD3Q2V2M9 1422 aa14.94□□□□□ -0.02
VTA1-201ENST00000367621 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
VTA1-201ENST00000367621 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
VTA1-201ENST00000367621 JPH4Q96JJ6 628 aa14.9□□□□□ -0.02
VTA1-201ENST00000367621 PPARGC1BQ86YN6 1023 aaKnown RBP14.87□□□□□ -0.03
VTA1-201ENST00000367621 CHD1O14646 1710 aa14.86□□□□□ -0.03
VTA1-201ENST00000367621 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
VTA1-201ENST00000367621 FMN1Q68DA7 1419 aa14.83□□□□□ -0.03
VTA1-201ENST00000367621 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.03
VTA1-201ENST00000367621 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
VTA1-201ENST00000367621 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
VTA1-201ENST00000367621 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
VTA1-201ENST00000367621 SSUH2Q9Y2M2 353 aa14.81□□□□□ -0.04
VTA1-201ENST00000367621 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
VTA1-201ENST00000367621 PRG4Q92954 1404 aaPredicted RBP14.8□□□□□ -0.04
VTA1-201ENST00000367621 FYCO1Q9BQS8 1478 aa14.79□□□□□ -0.04
VTA1-201ENST00000367621 SHROOM2Q13796 1616 aa14.78□□□□□ -0.04
VTA1-201ENST00000367621 PCF11O94913 1555 aaKnown RBP14.78□□□□□ -0.04
VTA1-201ENST00000367621 CARMIL2Q6F5E8 1435 aa14.78□□□□□ -0.04
VTA1-201ENST00000367621 EVX2Q03828 476 aa14.78□□□□□ -0.04
VTA1-201ENST00000367621 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
VTA1-201ENST00000367621 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
VTA1-201ENST00000367621 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
VTA1-201ENST00000367621 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
VTA1-201ENST00000367621 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
VTA1-201ENST00000367621 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
VTA1-201ENST00000367621 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
VTA1-201ENST00000367621 TIAM1Q13009 1591 aa14.72□□□□□ -0.05
VTA1-201ENST00000367621 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms