RNA–Protein interactions for RNA: ENST00000367537.7

SMG7-202, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMG7, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-202ENST00000367537 TOP2AP11388 1531 aaKnown RBP11.46□□□□□ -0.57
SMG7-202ENST00000367537 VPS8Q8N3P4 1428 aa11.45□□□□□ -0.58
SMG7-202ENST00000367537 SMARCA4P51532 1647 aa11.44□□□□□ -0.58
SMG7-202ENST00000367537 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
SMG7-202ENST00000367537 CHMP7Q8WUX9 453 aaPredicted RBP11.42□□□□□ -0.58
SMG7-202ENST00000367537 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
SMG7-202ENST00000367537 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
SMG7-202ENST00000367537 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
SMG7-202ENST00000367537 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
SMG7-202ENST00000367537 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
SMG7-202ENST00000367537 FOXD1Q16676 465 aa11.38□□□□□ -0.59
SMG7-202ENST00000367537 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
SMG7-202ENST00000367537 CCNB3Q8WWL7 1395 aa11.36□□□□□ -0.59
SMG7-202ENST00000367537 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMG7-202ENST00000367537 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
SMG7-202ENST00000367537 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
SMG7-202ENST00000367537 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
SMG7-202ENST00000367537 RAB3GAP2Q9H2M9 1393 aa11.34□□□□□ -0.59
SMG7-202ENST00000367537 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
SMG7-202ENST00000367537 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
SMG7-202ENST00000367537 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
SMG7-202ENST00000367537 CUX2O14529 1486 aa11.33□□□□□ -0.59
SMG7-202ENST00000367537 PLEKHD1A6NEE1 506 aa11.33□□□□□ -0.6
SMG7-202ENST00000367537 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
SMG7-202ENST00000367537 EIF4G2P78344 907 aaKnown RBP eCLIP11.32□□□□□ -0.65e-7■■□□□ 11.4
SMG7-202ENST00000367537 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
SMG7-202ENST00000367537 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
SMG7-202ENST00000367537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.64e-9■■□□□ 11.6
SMG7-202ENST00000367537 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
SMG7-202ENST00000367537 ARAP1Q96P48 1450 aa11.29□□□□□ -0.6
SMG7-202ENST00000367537 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
SMG7-202ENST00000367537 WDR43Q15061 677 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMG7-202ENST00000367537 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
SMG7-202ENST00000367537 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
SMG7-202ENST00000367537 KIF21BO75037 1637 aa11.26□□□□□ -0.61
SMG7-202ENST00000367537 FHOD3Q2V2M9 1422 aa11.25□□□□□ -0.61
SMG7-202ENST00000367537 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
SMG7-202ENST00000367537 CFDP1Q9UEE9 299 aaPredicted RBP11.23□□□□□ -0.61
SMG7-202ENST00000367537 CCDC136Q96JN2 1154 aa11.23□□□□□ -0.61
SMG7-202ENST00000367537 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
SMG7-202ENST00000367537 IGF1RP08069 1367 aa11.23□□□□□ -0.61
SMG7-202ENST00000367537 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
SMG7-202ENST00000367537 TIMELESSQ9UNS1 1208 aa11.21□□□□□ -0.61
SMG7-202ENST00000367537 PHLDB1Q86UU1 1377 aa11.21□□□□□ -0.61
SMG7-202ENST00000367537 PPP1R15AO75807 674 aaPredicted RBP11.2□□□□□ -0.62
SMG7-202ENST00000367537 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
SMG7-202ENST00000367537 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
SMG7-202ENST00000367537 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
SMG7-202ENST00000367537 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
SMG7-202ENST00000367537 SETD5Q9C0A6 1442 aa11.17□□□□□ -0.62
SMG7-202ENST00000367537 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
SMG7-202ENST00000367537 RAD54L2Q9Y4B4 1467 aa11.16□□□□□ -0.62
SMG7-202ENST00000367537 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
SMG7-202ENST00000367537 SENP3Q9H4L4 574 aaPredicted RBP11.15□□□□□ -0.63
SMG7-202ENST00000367537 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
SMG7-202ENST00000367537 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
SMG7-202ENST00000367537 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
SMG7-202ENST00000367537 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
SMG7-202ENST00000367537 CCDC184Q52MB2 194 aa11.13□□□□□ -0.63
SMG7-202ENST00000367537 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
SMG7-202ENST00000367537 MYH16Q9H6N6 1097 aa11.12□□□□□ -0.63
SMG7-202ENST00000367537 PRXQ9BXM0 1461 aa11.12□□□□□ -0.63
SMG7-202ENST00000367537 CADPSQ9ULU8 1353 aa11.12□□□□□ -0.63
SMG7-202ENST00000367537 RGL3Q3MIN7 710 aa11.11□□□□□ -0.63
SMG7-202ENST00000367537 ZNF644Q9H582 1327 aaPredicted RBP11.11□□□□□ -0.63
SMG7-202ENST00000367537 L3MBTL2Q969R5 705 aa11.11□□□□□ -0.63
SMG7-202ENST00000367537 KNSTRNQ9Y448 316 aa11.11□□□□□ -0.63
SMG7-202ENST00000367537 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
SMG7-202ENST00000367537 CUX1P39880 1505 aa11.1□□□□□ -0.63
SMG7-202ENST00000367537 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
SMG7-202ENST00000367537 RBM19Q9Y4C8 960 aaKnown RBP11.09□□□□□ -0.63
SMG7-202ENST00000367537 PDS5BQ9NTI5 1447 aa11.09□□□□□ -0.63
SMG7-202ENST00000367537 NESP48681 1621 aa11.08□□□□□ -0.64
SMG7-202ENST00000367537 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
SMG7-202ENST00000367537 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
SMG7-202ENST00000367537 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
SMG7-202ENST00000367537 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
SMG7-202ENST00000367537 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
SMG7-202ENST00000367537 KANK1Q14678 1352 aa11.04□□□□□ -0.64
SMG7-202ENST00000367537 NBR1Q14596 966 aa11.04□□□□□ -0.64
SMG7-202ENST00000367537 MPHOSPH9Q99550 1183 aa11.04□□□□□ -0.64
SMG7-202ENST00000367537 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
SMG7-202ENST00000367537 BECN1Q14457 450 aa11.03□□□□□ -0.64
SMG7-202ENST00000367537 NUDCQ9Y266 331 aa11.03□□□□□ -0.64
SMG7-202ENST00000367537 ANP32EQ9BTT0 268 aa11.03□□□□□ -0.64
SMG7-202ENST00000367537 WDR97A6NE52 1622 aa11.02□□□□□ -0.65
SMG7-202ENST00000367537 C11orf95C9JLR9 678 aaPredicted RBP11.02□□□□□ -0.65
SMG7-202ENST00000367537 CHMP4BQ9H444 224 aaKnown RBP11.02□□□□□ -0.65
SMG7-202ENST00000367537 RRBP1Q9P2E9 1410 aaKnown RBP11.01□□□□□ -0.65
SMG7-202ENST00000367537 NCAPD3P42695 1498 aa11□□□□□ -0.65
SMG7-202ENST00000367537 CCER2I3L3R5 266 aa11□□□□□ -0.65
SMG7-202ENST00000367537 MS4A1P11836 297 aa11□□□□□ -0.65
SMG7-202ENST00000367537 TMF1P82094 1093 aa11□□□□□ -0.65
SMG7-202ENST00000367537 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
SMG7-202ENST00000367537 LRRC9Q6ZRR7 1453 aa10.99□□□□□ -0.65
SMG7-202ENST00000367537 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
SMG7-202ENST00000367537 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
SMG7-202ENST00000367537 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
SMG7-202ENST00000367537 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
SMG7-202ENST00000367537 CFTRP13569 1480 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms