RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.21
SHPRH-202ENST00000367503 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
SHPRH-202ENST00000367503 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
SHPRH-202ENST00000367503 GOLGA3Q08378 1498 aa16.3■□□□□ 0.2
SHPRH-202ENST00000367503 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
SHPRH-202ENST00000367503 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.2
SHPRH-202ENST00000367503 BECN1Q14457 450 aa16.27■□□□□ 0.2
SHPRH-202ENST00000367503 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.19
SHPRH-202ENST00000367503 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
SHPRH-202ENST00000367503 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHPRH-202ENST00000367503 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
SHPRH-202ENST00000367503 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
SHPRH-202ENST00000367503 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
SHPRH-202ENST00000367503 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
SHPRH-202ENST00000367503 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
SHPRH-202ENST00000367503 PRKCSHP14314 528 aaPredicted RBP16.13■□□□□ 0.17
SHPRH-202ENST00000367503 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
SHPRH-202ENST00000367503 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
SHPRH-202ENST00000367503 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
SHPRH-202ENST00000367503 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHPRH-202ENST00000367503 L1TD1Q5T7N2 865 aaKnown RBP16.11■□□□□ 0.17
SHPRH-202ENST00000367503 GOLGA6L22H0YM25 854 aa16.07■□□□□ 0.16
SHPRH-202ENST00000367503 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
SHPRH-202ENST00000367503 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
SHPRH-202ENST00000367503 SLC24A1O60721 1099 aa16.05■□□□□ 0.16
SHPRH-202ENST00000367503 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
SHPRH-202ENST00000367503 KDM2AQ9Y2K7 1162 aa16.05■□□□□ 0.16
SHPRH-202ENST00000367503 FANCIQ9NVI1 1328 aa16.04■□□□□ 0.16
SHPRH-202ENST00000367503 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
SHPRH-202ENST00000367503 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
SHPRH-202ENST00000367503 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
SHPRH-202ENST00000367503 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
SHPRH-202ENST00000367503 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
SHPRH-202ENST00000367503 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
SHPRH-202ENST00000367503 DNTTIP2Q5QJE6 756 aaKnown RBP16.01■□□□□ 0.15
SHPRH-202ENST00000367503 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
SHPRH-202ENST00000367503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■□□□ 11.9
SHPRH-202ENST00000367503 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
SHPRH-202ENST00000367503 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
SHPRH-202ENST00000367503 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
SHPRH-202ENST00000367503 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
SHPRH-202ENST00000367503 NACADO15069 1562 aa15.96■□□□□ 0.15
SHPRH-202ENST00000367503 SENP3-EIF4A1A0A087X0R7 540 aa15.96■□□□□ 0.14
SHPRH-202ENST00000367503 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
SHPRH-202ENST00000367503 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
SHPRH-202ENST00000367503 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
SHPRH-202ENST00000367503 RGS3P49796 1198 aa15.93■□□□□ 0.14
SHPRH-202ENST00000367503 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
SHPRH-202ENST00000367503 MSNP26038 577 aaKnown RBP15.91■□□□□ 0.14
SHPRH-202ENST00000367503 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
SHPRH-202ENST00000367503 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
SHPRH-202ENST00000367503 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
SHPRH-202ENST00000367503 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
SHPRH-202ENST00000367503 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
SHPRH-202ENST00000367503 VPS8Q8N3P4 1428 aa15.87■□□□□ 0.13
SHPRH-202ENST00000367503 SOGA1O94964 1423 aa15.86■□□□□ 0.13
SHPRH-202ENST00000367503 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
SHPRH-202ENST00000367503 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
SHPRH-202ENST00000367503 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
SHPRH-202ENST00000367503 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
SHPRH-202ENST00000367503 GSE1Q14687 1217 aa15.85■□□□□ 0.13
SHPRH-202ENST00000367503 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
SHPRH-202ENST00000367503 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
SHPRH-202ENST00000367503 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
SHPRH-202ENST00000367503 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.13
SHPRH-202ENST00000367503 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.12
SHPRH-202ENST00000367503 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.12
SHPRH-202ENST00000367503 GOLGA6L3A6NEY3 463 aa15.81■□□□□ 0.12
SHPRH-202ENST00000367503 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
SHPRH-202ENST00000367503 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
SHPRH-202ENST00000367503 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
SHPRH-202ENST00000367503 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
SHPRH-202ENST00000367503 KCNH8Q96L42 1107 aa15.79■□□□□ 0.12
SHPRH-202ENST00000367503 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
SHPRH-202ENST00000367503 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
SHPRH-202ENST00000367503 GZF1Q9H116 711 aaPredicted RBP15.76■□□□□ 0.11
SHPRH-202ENST00000367503 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
SHPRH-202ENST00000367503 ARID3AQ99856 593 aa15.75■□□□□ 0.11
SHPRH-202ENST00000367503 CHAF1AQ13111 956 aaPredicted RBP15.75■□□□□ 0.11
SHPRH-202ENST00000367503 SLKQ9H2G2 1235 aaPredicted RBP15.73■□□□□ 0.11
SHPRH-202ENST00000367503 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
SHPRH-202ENST00000367503 CARMIL1Q5VZK9 1371 aa15.72■□□□□ 0.11
SHPRH-202ENST00000367503 KANK4Q5T7N3 995 aaPredicted RBP15.7■□□□□ 0.1
SHPRH-202ENST00000367503 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
SHPRH-202ENST00000367503 HSPA5P11021 654 aaKnown RBP15.69■□□□□ 0.1
SHPRH-202ENST00000367503 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
SHPRH-202ENST00000367503 PTMSP20962 102 aa15.69■□□□□ 0.1
SHPRH-202ENST00000367503 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
SHPRH-202ENST00000367503 IL27Q8NEV9 243 aa15.68■□□□□ 0.1
SHPRH-202ENST00000367503 FTSJ3Q8IY81 847 aaKnown RBP15.68■□□□□ 0.1
SHPRH-202ENST00000367503 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
SHPRH-202ENST00000367503 GBP4Q96PP9 640 aa15.67■□□□□ 0.1
SHPRH-202ENST00000367503 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
SHPRH-202ENST00000367503 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
SHPRH-202ENST00000367503 PDE4AP27815 886 aa15.66■□□□□ 0.1
SHPRH-202ENST00000367503 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
SHPRH-202ENST00000367503 MS4A1P11836 297 aa15.66■□□□□ 0.1
SHPRH-202ENST00000367503 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.1
SHPRH-202ENST00000367503 CASC1Q6TDU7 716 aa15.64■□□□□ 0.09
SHPRH-202ENST00000367503 CUX2O14529 1486 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms