RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
CD46-209ENST00000367047 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
CD46-209ENST00000367047 WASHC2CQ9Y4E1 1318 aa11.51□□□□□ -0.57
CD46-209ENST00000367047 NACADO15069 1562 aa11.51□□□□□ -0.57
CD46-209ENST00000367047 RANGAP1P46060 587 aaPredicted RBP11.5□□□□□ -0.57
CD46-209ENST00000367047 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
CD46-209ENST00000367047 USP35Q9P2H5 1018 aa11.48□□□□□ -0.57
CD46-209ENST00000367047 SIN3AQ96ST3 1273 aa11.47□□□□□ -0.57
CD46-209ENST00000367047 SOGA1O94964 1423 aa11.46□□□□□ -0.57
CD46-209ENST00000367047 GSE1Q14687 1217 aa11.46□□□□□ -0.58
CD46-209ENST00000367047 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
CD46-209ENST00000367047 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
CD46-209ENST00000367047 AEBP2Q6ZN18 517 aaPredicted RBP11.41□□□□□ -0.58
CD46-209ENST00000367047 PPM1GO15355 546 aaPredicted RBP11.41□□□□□ -0.58
CD46-209ENST00000367047 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
CD46-209ENST00000367047 A0A0U1RQG5 324 aaPredicted RBP11.39□□□□□ -0.59
CD46-209ENST00000367047 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
CD46-209ENST00000367047 CLIP1P30622 1438 aa11.38□□□□□ -0.59
CD46-209ENST00000367047 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
CD46-209ENST00000367047 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
CD46-209ENST00000367047 EEA1Q15075 1411 aa11.36□□□□□ -0.59
CD46-209ENST00000367047 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
CD46-209ENST00000367047 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
CD46-209ENST00000367047 GOLGA3Q08378 1498 aa11.34□□□□□ -0.59
CD46-209ENST00000367047 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
CD46-209ENST00000367047 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
CD46-209ENST00000367047 NFKBIBQ15653 356 aa11.33□□□□□ -0.6
CD46-209ENST00000367047 DCAF11Q8TEB1 546 aa11.32□□□□□ -0.6
CD46-209ENST00000367047 UNC13AQ9UPW8 1703 aa11.31□□□□□ -0.6
CD46-209ENST00000367047 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
CD46-209ENST00000367047 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
CD46-209ENST00000367047 NAP1L5Q96NT1 182 aaPredicted RBP11.3□□□□□ -0.6
CD46-209ENST00000367047 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
CD46-209ENST00000367047 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
CD46-209ENST00000367047 PDE4AP27815 886 aa11.27□□□□□ -0.6
CD46-209ENST00000367047 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
CD46-209ENST00000367047 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.61
CD46-209ENST00000367047 RAB3GAP2Q9H2M9 1393 aa11.26□□□□□ -0.61
CD46-209ENST00000367047 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
CD46-209ENST00000367047 AKNAQ7Z591 1439 aa11.23□□□□□ -0.61
CD46-209ENST00000367047 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
CD46-209ENST00000367047 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
CD46-209ENST00000367047 MAPKBP1O60336 1514 aa11.23□□□□□ -0.61
CD46-209ENST00000367047 SCRIBQ14160 1630 aa11.23□□□□□ -0.61
CD46-209ENST00000367047 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
CD46-209ENST00000367047 ZBED9Q6R2W3 1325 aa11.22□□□□□ -0.61
CD46-209ENST00000367047 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
CD46-209ENST00000367047 AAMPQ13685 434 aa11.21□□□□□ -0.61
CD46-209ENST00000367047 BACH2Q9BYV9 841 aa11.21□□□□□ -0.61
CD46-209ENST00000367047 ARID4BQ4LE39 1312 aaPredicted RBP11.2□□□□□ -0.62
CD46-209ENST00000367047 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
CD46-209ENST00000367047 PNNQ9H307 717 aaKnown RBP11.2□□□□□ -0.62
CD46-209ENST00000367047 FGD1P98174 961 aa11.2□□□□□ -0.62
CD46-209ENST00000367047 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
CD46-209ENST00000367047 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
CD46-209ENST00000367047 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
CD46-209ENST00000367047 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
CD46-209ENST00000367047 PDE4CQ08493 712 aa11.19□□□□□ -0.62
CD46-209ENST00000367047 ARXQ96QS3 562 aa11.18□□□□□ -0.62
CD46-209ENST00000367047 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
CD46-209ENST00000367047 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
CD46-209ENST00000367047 CUX2O14529 1486 aa11.16□□□□□ -0.62
CD46-209ENST00000367047 RRBP1Q9P2E9 1410 aaKnown RBP11.16□□□□□ -0.62
CD46-209ENST00000367047 WIZO95785 1651 aa11.15□□□□□ -0.62
CD46-209ENST00000367047 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
CD46-209ENST00000367047 EIF4G1Q04637 1599 aaKnown RBP11.14□□□□□ -0.63
CD46-209ENST00000367047 KIF21BO75037 1637 aa11.14□□□□□ -0.63
CD46-209ENST00000367047 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
CD46-209ENST00000367047 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
CD46-209ENST00000367047 RGS3P49796 1198 aa11.12□□□□□ -0.63
CD46-209ENST00000367047 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
CD46-209ENST00000367047 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
CD46-209ENST00000367047 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
CD46-209ENST00000367047 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
CD46-209ENST00000367047 POGKQ9P215 609 aa11.12□□□□□ -0.63
CD46-209ENST00000367047 MS4A1P11836 297 aa11.11□□□□□ -0.63
CD46-209ENST00000367047 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
CD46-209ENST00000367047 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
CD46-209ENST00000367047 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
CD46-209ENST00000367047 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
CD46-209ENST00000367047 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
CD46-209ENST00000367047 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
CD46-209ENST00000367047 CLCN1P35523 988 aa11.07□□□□□ -0.64
CD46-209ENST00000367047 L1TD1Q5T7N2 865 aaKnown RBP11.07□□□□□ -0.64
CD46-209ENST00000367047 PRDM4Q9UKN5 801 aa11.06□□□□□ -0.64
CD46-209ENST00000367047 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
CD46-209ENST00000367047 PDCL3Q9H2J4 239 aa11.04□□□□□ -0.64
CD46-209ENST00000367047 SMARCA2P51531 1590 aa11.04□□□□□ -0.64
CD46-209ENST00000367047 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
CD46-209ENST00000367047 PEG3Q9GZU2 1588 aa11.02□□□□□ -0.64
CD46-209ENST00000367047 PANK2Q9BZ23 570 aa11.02□□□□□ -0.65
CD46-209ENST00000367047 XRCC6P12956 609 aaKnown RBP eCLIP11.02□□□□□ -0.65
CD46-209ENST00000367047 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
CD46-209ENST00000367047 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
CD46-209ENST00000367047 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
CD46-209ENST00000367047 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
CD46-209ENST00000367047 GOLGA6L3A6NEY3 463 aa10.98□□□□□ -0.65
CD46-209ENST00000367047 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
CD46-209ENST00000367047 SLKQ9H2G2 1235 aaPredicted RBP10.97□□□□□ -0.65
CD46-209ENST00000367047 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms