RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 ZNF777Q9ULD5 760 aaPredicted RBP20.68■□□□□ 0.9
FBXO28-201ENST00000366862 LAS1LQ9Y4W2 734 aaKnown RBP20.67■□□□□ 0.9
FBXO28-201ENST00000366862 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
FBXO28-201ENST00000366862 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
FBXO28-201ENST00000366862 EEA1Q15075 1411 aa20.63■□□□□ 0.89
FBXO28-201ENST00000366862 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
FBXO28-201ENST00000366862 ABCC9O60706 1549 aa20.59■□□□□ 0.89
FBXO28-201ENST00000366862 MYH16Q9H6N6 1097 aa20.58■□□□□ 0.88
FBXO28-201ENST00000366862 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
FBXO28-201ENST00000366862 L1TD1Q5T7N2 865 aaKnown RBP20.55■□□□□ 0.88
FBXO28-201ENST00000366862 PTMAP06454 111 aaKnown RBP20.55■□□□□ 0.88
FBXO28-201ENST00000366862 CHIC2Q9UKJ5 165 aa20.55■□□□□ 0.88
FBXO28-201ENST00000366862 CCER2I3L3R5 266 aa20.54■□□□□ 0.88
FBXO28-201ENST00000366862 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
FBXO28-201ENST00000366862 DNTTIP2Q5QJE6 756 aaKnown RBP20.51■□□□□ 0.87
FBXO28-201ENST00000366862 B4GALNT3Q6L9W6 998 aa20.5■□□□□ 0.87
FBXO28-201ENST00000366862 TNIKQ9UKE5 1360 aa20.49■□□□□ 0.87
FBXO28-201ENST00000366862 MTUS2Q5JR59 1369 aa20.49■□□□□ 0.87
FBXO28-201ENST00000366862 FBLN2P98095 1184 aa20.44■□□□□ 0.86
FBXO28-201ENST00000366862 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
FBXO28-201ENST00000366862 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
FBXO28-201ENST00000366862 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
FBXO28-201ENST00000366862 CDK11BP21127 795 aaKnown RBP20.41■□□□□ 0.86
FBXO28-201ENST00000366862 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
FBXO28-201ENST00000366862 RGS3P49796 1198 aa20.36■□□□□ 0.85
FBXO28-201ENST00000366862 CASC1Q6TDU7 716 aa20.36■□□□□ 0.85
FBXO28-201ENST00000366862 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
FBXO28-201ENST00000366862 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
FBXO28-201ENST00000366862 CHGAP10645 457 aaKnown RBP20.34■□□□□ 0.85
FBXO28-201ENST00000366862 MSNP26038 577 aaKnown RBP20.33■□□□□ 0.85
FBXO28-201ENST00000366862 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
FBXO28-201ENST00000366862 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
FBXO28-201ENST00000366862 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
FBXO28-201ENST00000366862 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
FBXO28-201ENST00000366862 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
FBXO28-201ENST00000366862 IPO9Q96P70 1041 aaKnown RBP20.28■□□□□ 0.84
FBXO28-201ENST00000366862 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
FBXO28-201ENST00000366862 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
FBXO28-201ENST00000366862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.84
FBXO28-201ENST00000366862 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
FBXO28-201ENST00000366862 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
FBXO28-201ENST00000366862 CHAF1AQ13111 956 aaPredicted RBP20.26■□□□□ 0.83
FBXO28-201ENST00000366862 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
FBXO28-201ENST00000366862 ZRSR1Q15695 479 aaKnown RBP20.26■□□□□ 0.83
FBXO28-201ENST00000366862 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
FBXO28-201ENST00000366862 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.24■□□□□ 0.83
FBXO28-201ENST00000366862 MS4A1P11836 297 aa20.24■□□□□ 0.83
FBXO28-201ENST00000366862 PTMSP20962 102 aa20.23■□□□□ 0.83
FBXO28-201ENST00000366862 CHMP4BQ9H444 224 aaKnown RBP20.22■□□□□ 0.83
FBXO28-201ENST00000366862 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
FBXO28-201ENST00000366862 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
FBXO28-201ENST00000366862 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
FBXO28-201ENST00000366862 GOLGA6L6A8MZA4 724 aa20.2■□□□□ 0.82
FBXO28-201ENST00000366862 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
FBXO28-201ENST00000366862 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
FBXO28-201ENST00000366862 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
FBXO28-201ENST00000366862 PLCB2Q00722 1185 aa20.15■□□□□ 0.82
FBXO28-201ENST00000366862 NRDCO43847 1150 aa20.14■□□□□ 0.81
FBXO28-201ENST00000366862 FRAT1Q92837 279 aaPredicted RBP20.13■□□□□ 0.81
FBXO28-201ENST00000366862 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
FBXO28-201ENST00000366862 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
FBXO28-201ENST00000366862 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
FBXO28-201ENST00000366862 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
FBXO28-201ENST00000366862 GOLGA6L3A6NEY3 463 aa20.1■□□□□ 0.81
FBXO28-201ENST00000366862 SETD5Q9C0A6 1442 aa20.06■□□□□ 0.8
FBXO28-201ENST00000366862 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
FBXO28-201ENST00000366862 RCAN3Q9UKA8 241 aa20.05■□□□□ 0.8
FBXO28-201ENST00000366862 HSP90AA2PQ14568 343 aaPredicted RBP20.04■□□□□ 0.8
FBXO28-201ENST00000366862 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
FBXO28-201ENST00000366862 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
FBXO28-201ENST00000366862 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
FBXO28-201ENST00000366862 TPRNQ4KMQ1 711 aa20.04■□□□□ 0.8
FBXO28-201ENST00000366862 HSPA5P11021 654 aaKnown RBP20.03■□□□□ 0.8
FBXO28-201ENST00000366862 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
FBXO28-201ENST00000366862 KIAA2012Q0VF49 1180 aa20.03■□□□□ 0.8
FBXO28-201ENST00000366862 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
FBXO28-201ENST00000366862 NEUROD2Q15784 382 aa20.02■□□□□ 0.8
FBXO28-201ENST00000366862 SPRYD3Q8NCJ5 442 aa20.01■□□□□ 0.79
FBXO28-201ENST00000366862 CC2D1BQ5T0F9 858 aaKnown RBP20■□□□□ 0.79
FBXO28-201ENST00000366862 KIF27Q86VH2 1401 aa20■□□□□ 0.79
FBXO28-201ENST00000366862 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
FBXO28-201ENST00000366862 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
FBXO28-201ENST00000366862 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
FBXO28-201ENST00000366862 GSE1Q14687 1217 aa19.97■□□□□ 0.79
FBXO28-201ENST00000366862 GOLGA6L4A6NEF3 574 aa19.96■□□□□ 0.79
FBXO28-201ENST00000366862 MCCP23508 829 aa19.96■□□□□ 0.79
FBXO28-201ENST00000366862 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
FBXO28-201ENST00000366862 TMF1P82094 1093 aa19.95■□□□□ 0.78
FBXO28-201ENST00000366862 RALBP1Q15311 655 aa19.93■□□□□ 0.78
FBXO28-201ENST00000366862 DRC7Q8IY82 874 aa19.93■□□□□ 0.78
FBXO28-201ENST00000366862 KTN1Q86UP2 1357 aaKnown RBP19.93■□□□□ 0.78
FBXO28-201ENST00000366862 SYAP1Q96A49 352 aaPredicted RBP19.91■□□□□ 0.78
FBXO28-201ENST00000366862 RWDD1Q9H446 243 aaPredicted RBP19.91■□□□□ 0.78
FBXO28-201ENST00000366862 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
FBXO28-201ENST00000366862 VSIG10Q8N0Z9 540 aa19.9■□□□□ 0.78
FBXO28-201ENST00000366862 PDE3BQ13370 1112 aa19.89■□□□□ 0.77
FBXO28-201ENST00000366862 AMER1Q5JTC6 1135 aaPredicted RBP19.88■□□□□ 0.77
FBXO28-201ENST00000366862 PMFBP1Q8TBY8 1022 aa19.88■□□□□ 0.77
FBXO28-201ENST00000366862 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
FBXO28-201ENST00000366862 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms