RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 CHD1O14646 1710 aa15.28■□□□□ 0.04
CNIH4-202ENST00000366857 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
CNIH4-202ENST00000366857 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
CNIH4-202ENST00000366857 GRIN2BQ13224 1484 aa15.27■□□□□ 0.03
CNIH4-202ENST00000366857 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
CNIH4-202ENST00000366857 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
CNIH4-202ENST00000366857 FHAD1B1AJZ9 1412 aa15.25■□□□□ 0.03
CNIH4-202ENST00000366857 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
CNIH4-202ENST00000366857 DISP1Q96F81 1524 aa15.23■□□□□ 0.03
CNIH4-202ENST00000366857 KIAA0556O60303 1618 aa15.23■□□□□ 0.03
CNIH4-202ENST00000366857 NUP160Q12769 1436 aa15.23■□□□□ 0.03
CNIH4-202ENST00000366857 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
CNIH4-202ENST00000366857 CLASP1Q7Z460 1538 aa15.18■□□□□ 0.02
CNIH4-202ENST00000366857 ADCY10Q96PN6 1610 aa15.18■□□□□ 0.02
CNIH4-202ENST00000366857 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
CNIH4-202ENST00000366857 MAGI3Q5TCQ9 1506 aa15.16■□□□□ 0.02
CNIH4-202ENST00000366857 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
CNIH4-202ENST00000366857 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
CNIH4-202ENST00000366857 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
CNIH4-202ENST00000366857 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
CNIH4-202ENST00000366857 KIAA0586Q9BVV6 1533 aa15.1■□□□□ 0.01
CNIH4-202ENST00000366857 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
CNIH4-202ENST00000366857 ABCA8O94911 1581 aa15.08■□□□□ 0
CNIH4-202ENST00000366857 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
CNIH4-202ENST00000366857 RAPGEF6Q8TEU7 1601 aa15.03■□□□□ -0
CNIH4-202ENST00000366857 ERCC6Q03468 1493 aa15.02□□□□□ -0.01
CNIH4-202ENST00000366857 HECW1Q76N89 1606 aa15.02□□□□□ -0.01
CNIH4-202ENST00000366857 CROCC2H7BZ55 1655 aa14.98□□□□□ -0.01
CNIH4-202ENST00000366857 TRIM26Q12899 539 aaPredicted RBP14.96□□□□□ -0.01
CNIH4-202ENST00000366857 SUPT6HQ7KZ85 1726 aaKnown RBP14.94□□□□□ -0.02
CNIH4-202ENST00000366857 FHOD3Q2V2M9 1422 aa14.94□□□□□ -0.02
CNIH4-202ENST00000366857 NUP153P49790 1475 aaKnown RBP14.94□□□□□ -0.02
CNIH4-202ENST00000366857 TCOF1Q13428 1488 aaKnown RBP14.93□□□□□ -0.02
CNIH4-202ENST00000366857 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
CNIH4-202ENST00000366857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.92□□□□□ -0.027e-7■■■■■ 52.8
CNIH4-202ENST00000366857 GCC2Q8IWJ2 1684 aa14.92□□□□□ -0.02
CNIH4-202ENST00000366857 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
CNIH4-202ENST00000366857 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
CNIH4-202ENST00000366857 FMN1Q68DA7 1419 aa14.89□□□□□ -0.03
CNIH4-202ENST00000366857 EPRSP07814 1512 aaKnown RBP14.89□□□□□ -0.03
CNIH4-202ENST00000366857 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
CNIH4-202ENST00000366857 KDM5BQ9UGL1 1544 aa14.87□□□□□ -0.03
CNIH4-202ENST00000366857 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
CNIH4-202ENST00000366857 KANK4Q5T7N3 995 aaPredicted RBP14.85□□□□□ -0.03
CNIH4-202ENST00000366857 KIF14Q15058 1648 aa14.83□□□□□ -0.03
CNIH4-202ENST00000366857 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
CNIH4-202ENST00000366857 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
CNIH4-202ENST00000366857 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
CNIH4-202ENST00000366857 UBTFP17480 764 aaKnown RBP14.8□□□□□ -0.04
CNIH4-202ENST00000366857 ITSN2Q9NZM3 1697 aa14.8□□□□□ -0.04
CNIH4-202ENST00000366857 CDK13Q14004 1512 aaKnown RBP14.79□□□□□ -0.04
CNIH4-202ENST00000366857 UHRF1BP1LA0JNW5 1464 aa14.79□□□□□ -0.04
CNIH4-202ENST00000366857 DNMT1P26358 1616 aaKnown RBP14.79□□□□□ -0.04
CNIH4-202ENST00000366857 ADGBQ8N7X0 1667 aa14.78□□□□□ -0.04
CNIH4-202ENST00000366857 PREX2Q70Z35 1606 aa14.78□□□□□ -0.04
CNIH4-202ENST00000366857 ZCCHC11Q5TAX3 1644 aaKnown RBP14.77□□□□□ -0.04
CNIH4-202ENST00000366857 DENND4BO75064 1496 aaPredicted RBP14.75□□□□□ -0.05
CNIH4-202ENST00000366857 MAPKBP1O60336 1514 aa14.74□□□□□ -0.05
CNIH4-202ENST00000366857 HRCP23327 699 aa14.74□□□□□ -0.05
CNIH4-202ENST00000366857 NCOA2Q15596 1464 aa14.73□□□□□ -0.05
CNIH4-202ENST00000366857 KDM6BO15054 1643 aa14.73□□□□□ -0.05
CNIH4-202ENST00000366857 PTPRKQ15262 1439 aa14.73□□□□□ -0.05
CNIH4-202ENST00000366857 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
CNIH4-202ENST00000366857 PLB1Q6P1J6 1458 aa14.71□□□□□ -0.05
CNIH4-202ENST00000366857 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
CNIH4-202ENST00000366857 ATP10BO94823 1461 aa14.68□□□□□ -0.06
CNIH4-202ENST00000366857 AKNAQ7Z591 1439 aa14.68□□□□□ -0.06
CNIH4-202ENST00000366857 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
CNIH4-202ENST00000366857 FGD6Q6ZV73 1430 aa14.67□□□□□ -0.06
CNIH4-202ENST00000366857 TTC37Q6PGP7 1564 aa14.67□□□□□ -0.06
CNIH4-202ENST00000366857 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
CNIH4-202ENST00000366857 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
CNIH4-202ENST00000366857 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
CNIH4-202ENST00000366857 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
CNIH4-202ENST00000366857 ARHGEF5Q12774 1597 aa14.66□□□□□ -0.06
CNIH4-202ENST00000366857 MYOM3Q5VTT5 1437 aa14.65□□□□□ -0.06
CNIH4-202ENST00000366857 ABCA9Q8IUA7 1624 aa14.65□□□□□ -0.06
CNIH4-202ENST00000366857 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
CNIH4-202ENST00000366857 MYO5CQ9NQX4 1742 aa14.64□□□□□ -0.07
CNIH4-202ENST00000366857 SAMD9LQ8IVG5 1584 aa14.64□□□□□ -0.07
CNIH4-202ENST00000366857 ARAP3Q8WWN8 1544 aa14.63□□□□□ -0.07
CNIH4-202ENST00000366857 CCNB3Q8WWL7 1395 aa14.63□□□□□ -0.07
CNIH4-202ENST00000366857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.62□□□□□ -0.074e-6■■□□□ 13.9
CNIH4-202ENST00000366857 ADGRL2O95490 1459 aa14.61□□□□□ -0.07
CNIH4-202ENST00000366857 BCORL1Q5H9F3 1711 aa14.6□□□□□ -0.07
CNIH4-202ENST00000366857 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
CNIH4-202ENST00000366857 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
CNIH4-202ENST00000366857 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
CNIH4-202ENST00000366857 KDM5DQ9BY66 1539 aa14.57□□□□□ -0.08
CNIH4-202ENST00000366857 PLXNC1O60486 1568 aa14.57□□□□□ -0.08
CNIH4-202ENST00000366857 HFM1A2PYH4 1435 aa14.56□□□□□ -0.08
CNIH4-202ENST00000366857 SHANK2Q9UPX8 1470 aa14.55□□□□□ -0.08
CNIH4-202ENST00000366857 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
CNIH4-202ENST00000366857 MBD5Q9P267 1494 aa14.55□□□□□ -0.08
CNIH4-202ENST00000366857 DHX57Q6P158 1386 aaKnown RBP14.54□□□□□ -0.08
CNIH4-202ENST00000366857 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
CNIH4-202ENST00000366857 NAIPQ13075 1403 aa14.52□□□□□ -0.09
CNIH4-202ENST00000366857 UNC13BO14795 1591 aa14.52□□□□□ -0.09
CNIH4-202ENST00000366857 KIF13AQ9H1H9 1805 aa14.51□□□□□ -0.09
CNIH4-202ENST00000366857 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms