RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 CUL7Q14999 1698 aa23.2■■□□□ 1.3
MRPL55-205ENST00000366731 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-205ENST00000366731 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
MRPL55-205ENST00000366731 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
MRPL55-205ENST00000366731 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
MRPL55-205ENST00000366731 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
MRPL55-205ENST00000366731 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
MRPL55-205ENST00000366731 CSRNP3Q8WYN3 585 aa22.95■■□□□ 1.26
MRPL55-205ENST00000366731 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
MRPL55-205ENST00000366731 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
MRPL55-205ENST00000366731 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
MRPL55-205ENST00000366731 PTPRGP23470 1445 aa22.9■■□□□ 1.26
MRPL55-205ENST00000366731 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
MRPL55-205ENST00000366731 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
MRPL55-205ENST00000366731 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
MRPL55-205ENST00000366731 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
MRPL55-205ENST00000366731 UGGT2Q9NYU1 1516 aa22.8■■□□□ 1.24
MRPL55-205ENST00000366731 EEA1Q15075 1411 aa22.79■■□□□ 1.24
MRPL55-205ENST00000366731 ADCY10Q96PN6 1610 aa22.79■■□□□ 1.24
MRPL55-205ENST00000366731 EHMT2Q96KQ7 1210 aa22.77■■□□□ 1.24
MRPL55-205ENST00000366731 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
MRPL55-205ENST00000366731 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
MRPL55-205ENST00000366731 FAM69CQ0P6D2 419 aa22.73■■□□□ 1.23
MRPL55-205ENST00000366731 CTTNBP2Q8WZ74 1663 aa22.72■■□□□ 1.23
MRPL55-205ENST00000366731 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
MRPL55-205ENST00000366731 UACAQ9BZF9 1416 aa22.7■■□□□ 1.23
MRPL55-205ENST00000366731 GOLGA3Q08378 1498 aa22.68■■□□□ 1.22
MRPL55-205ENST00000366731 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
MRPL55-205ENST00000366731 MAPKBP1O60336 1514 aa22.64■■□□□ 1.21
MRPL55-205ENST00000366731 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
MRPL55-205ENST00000366731 UHRF1BP1LA0JNW5 1464 aa22.62■■□□□ 1.21
MRPL55-205ENST00000366731 PLB1Q6P1J6 1458 aa22.61■■□□□ 1.21
MRPL55-205ENST00000366731 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
MRPL55-205ENST00000366731 ASXL2Q76L83 1435 aa22.58■■□□□ 1.2
MRPL55-205ENST00000366731 ARID3CA6NKF2 412 aa22.57■■□□□ 1.2
MRPL55-205ENST00000366731 KIF13AQ9H1H9 1805 aa22.55■■□□□ 1.2
MRPL55-205ENST00000366731 KIF21BO75037 1637 aa22.54■■□□□ 1.2
MRPL55-205ENST00000366731 DIP2BQ9P265 1576 aa22.53■■□□□ 1.2
MRPL55-205ENST00000366731 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
MRPL55-205ENST00000366731 ABCA8O94911 1581 aa22.48■■□□□ 1.19
MRPL55-205ENST00000366731 ZCCHC11Q5TAX3 1644 aaKnown RBP22.47■■□□□ 1.19
MRPL55-205ENST00000366731 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
MRPL55-205ENST00000366731 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
MRPL55-205ENST00000366731 SAMD9Q5K651 1589 aa22.45■■□□□ 1.19
MRPL55-205ENST00000366731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.42■■□□□ 1.18
MRPL55-205ENST00000366731 HNRNPUL2Q1KMD3 747 aaKnown RBP22.42■■□□□ 1.18
MRPL55-205ENST00000366731 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
MRPL55-205ENST00000366731 TSPOAP1O95153 1857 aa22.4■■□□□ 1.18
MRPL55-205ENST00000366731 WDR7Q9Y4E6 1490 aa22.39■■□□□ 1.17
MRPL55-205ENST00000366731 ATP10BO94823 1461 aa22.37■■□□□ 1.17
MRPL55-205ENST00000366731 GLI2P10070 1586 aa22.35■■□□□ 1.17
MRPL55-205ENST00000366731 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
MRPL55-205ENST00000366731 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
MRPL55-205ENST00000366731 ATP1B4Q9UN42 357 aaPredicted RBP22.32■■□□□ 1.16
MRPL55-205ENST00000366731 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
MRPL55-205ENST00000366731 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
MRPL55-205ENST00000366731 CD109Q6YHK3 1445 aa22.26■■□□□ 1.15
MRPL55-205ENST00000366731 KDM6BO15054 1643 aa22.26■■□□□ 1.15
MRPL55-205ENST00000366731 MAP3K4Q9Y6R4 1608 aa22.24■■□□□ 1.15
MRPL55-205ENST00000366731 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
MRPL55-205ENST00000366731 PPRC1Q5VV67 1664 aaKnown RBP22.23■■□□□ 1.15
MRPL55-205ENST00000366731 TEX14Q8IWB6 1497 aa22.2■■□□□ 1.15
MRPL55-205ENST00000366731 FMN1Q68DA7 1419 aa22.19■■□□□ 1.14
MRPL55-205ENST00000366731 COL17A1Q9UMD9 1497 aaPredicted RBP22.18■■□□□ 1.14
MRPL55-205ENST00000366731 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
MRPL55-205ENST00000366731 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
MRPL55-205ENST00000366731 MAGI3Q5TCQ9 1506 aa22.14■■□□□ 1.14
MRPL55-205ENST00000366731 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
MRPL55-205ENST00000366731 CLIP1P30622 1438 aa22.11■■□□□ 1.13
MRPL55-205ENST00000366731 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
MRPL55-205ENST00000366731 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
MRPL55-205ENST00000366731 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
MRPL55-205ENST00000366731 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
MRPL55-205ENST00000366731 RAPGEF3O95398 923 aa22■■□□□ 1.11
MRPL55-205ENST00000366731 CASKIN1Q8WXD9 1431 aa22■■□□□ 1.11
MRPL55-205ENST00000366731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.99■■□□□ 1.11
MRPL55-205ENST00000366731 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
MRPL55-205ENST00000366731 KDM4FA0A1W2PPD8 638 aa21.97■■□□□ 1.11
MRPL55-205ENST00000366731 PHLDB1Q86UU1 1377 aa21.96■■□□□ 1.11
MRPL55-205ENST00000366731 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
MRPL55-205ENST00000366731 NEO1Q92859 1461 aa21.95■■□□□ 1.1
MRPL55-205ENST00000366731 ARAP3Q8WWN8 1544 aa21.95■■□□□ 1.1
MRPL55-205ENST00000366731 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
MRPL55-205ENST00000366731 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
MRPL55-205ENST00000366731 FANCAO15360 1455 aa21.92■■□□□ 1.1
MRPL55-205ENST00000366731 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
MRPL55-205ENST00000366731 LRRIQ1Q96JM4 1722 aa21.9■■□□□ 1.1
MRPL55-205ENST00000366731 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
MRPL55-205ENST00000366731 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
MRPL55-205ENST00000366731 PLCH2O75038 1416 aa21.89■■□□□ 1.09
MRPL55-205ENST00000366731 KIF14Q15058 1648 aa21.88■■□□□ 1.09
MRPL55-205ENST00000366731 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
MRPL55-205ENST00000366731 DENND4BO75064 1496 aaPredicted RBP21.85■■□□□ 1.09
MRPL55-205ENST00000366731 ADGRL1O94910 1474 aa21.83■■□□□ 1.09
MRPL55-205ENST00000366731 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
MRPL55-205ENST00000366731 FRMPD1Q5SYB0 1578 aa21.79■■□□□ 1.08
MRPL55-205ENST00000366731 CFAP74Q9C0B2 1584 aa21.79■■□□□ 1.08
MRPL55-205ENST00000366731 ARHGAP5Q13017 1502 aa21.78■■□□□ 1.08
MRPL55-205ENST00000366731 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.08
MRPL55-205ENST00000366731 MTUS2Q5JR59 1369 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms