RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
RNU6-238P-201ENST00000363313 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
RNU6-238P-201ENST00000363313 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
RNU6-238P-201ENST00000363313 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
RNU6-238P-201ENST00000363313 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
RNU6-238P-201ENST00000363313 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
RNU6-238P-201ENST00000363313 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
RNU6-238P-201ENST00000363313 MIER1Q8N108 512 aa9.76□□□□□ -0.85
RNU6-238P-201ENST00000363313 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
RNU6-238P-201ENST00000363313 TIE1P35590 1138 aa9.73□□□□□ -0.85
RNU6-238P-201ENST00000363313 SGIP1Q9BQI5 828 aa9.73□□□□□ -0.85
RNU6-238P-201ENST00000363313 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
RNU6-238P-201ENST00000363313 ATN1P54259 1190 aaPredicted RBP9.7□□□□□ -0.86
RNU6-238P-201ENST00000363313 SCUBE2Q9NQ36 999 aa9.69□□□□□ -0.86
RNU6-238P-201ENST00000363313 POTEMA6NI47 508 aa9.68□□□□□ -0.86
RNU6-238P-201ENST00000363313 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
RNU6-238P-201ENST00000363313 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
RNU6-238P-201ENST00000363313 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
RNU6-238P-201ENST00000363313 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
RNU6-238P-201ENST00000363313 MAP3K13O43283 966 aa9.66□□□□□ -0.86
RNU6-238P-201ENST00000363313 POTEGQ6S5H5 508 aa9.65□□□□□ -0.86
RNU6-238P-201ENST00000363313 PLCD3Q8N3E9 789 aa9.65□□□□□ -0.86
RNU6-238P-201ENST00000363313 IER5LQ5T953 404 aa9.63□□□□□ -0.87
RNU6-238P-201ENST00000363313 POTEFA5A3E0 1075 aa9.59□□□□□ -0.87
RNU6-238P-201ENST00000363313 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
RNU6-238P-201ENST00000363313 NUBP1P53384 320 aa9.59□□□□□ -0.87
RNU6-238P-201ENST00000363313 TRPC6Q9Y210 931 aa9.58□□□□□ -0.88
RNU6-238P-201ENST00000363313 SEC24BO95487 1268 aa9.57□□□□□ -0.88
RNU6-238P-201ENST00000363313 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
RNU6-238P-201ENST00000363313 FAM212AQ96EL1 285 aa9.55□□□□□ -0.88
RNU6-238P-201ENST00000363313 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
RNU6-238P-201ENST00000363313 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
RNU6-238P-201ENST00000363313 FAM163AQ96GL9 167 aaPredicted RBP9.51□□□□□ -0.89
RNU6-238P-201ENST00000363313 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
RNU6-238P-201ENST00000363313 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
RNU6-238P-201ENST00000363313 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
RNU6-238P-201ENST00000363313 FKBP8Q14318 412 aa9.45□□□□□ -0.9
RNU6-238P-201ENST00000363313 TMEM106CQ9BVX2 250 aa9.45□□□□□ -0.9
RNU6-238P-201ENST00000363313 PLCG2P16885 1265 aa9.42□□□□□ -0.9
RNU6-238P-201ENST00000363313 IRX5P78411 483 aaPredicted RBP9.41□□□□□ -0.9
RNU6-238P-201ENST00000363313 DCAF8Q5TAQ9 597 aa9.4□□□□□ -0.9
RNU6-238P-201ENST00000363313 OCEL1Q9H607 264 aa9.4□□□□□ -0.9
RNU6-238P-201ENST00000363313 SLAIN1Q8ND83 568 aa9.38□□□□□ -0.91
RNU6-238P-201ENST00000363313 GSE1Q14687 1217 aa9.36□□□□□ -0.91
RNU6-238P-201ENST00000363313 SNPHO15079 494 aa9.35□□□□□ -0.91
RNU6-238P-201ENST00000363313 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
RNU6-238P-201ENST00000363313 TMEM121BQ9BXQ6 578 aaPredicted RBP9.34□□□□□ -0.91
RNU6-238P-201ENST00000363313 PYGBP11216 843 aa9.33□□□□□ -0.92
RNU6-238P-201ENST00000363313 ZNF467Q7Z7K2 595 aaPredicted RBP9.33□□□□□ -0.92
RNU6-238P-201ENST00000363313 CDAN1Q8IWY9 1227 aa9.33□□□□□ -0.92
RNU6-238P-201ENST00000363313 ST18O60284 1047 aa9.31□□□□□ -0.92
RNU6-238P-201ENST00000363313 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
RNU6-238P-201ENST00000363313 VASPP50552 380 aaPredicted RBP9.27□□□□□ -0.93
RNU6-238P-201ENST00000363313 L3MBTL3Q96JM7 780 aaPredicted RBP9.27□□□□□ -0.93
RNU6-238P-201ENST00000363313 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
RNU6-238P-201ENST00000363313 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
RNU6-238P-201ENST00000363313 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
RNU6-238P-201ENST00000363313 MKRN3Q13064 507 aaKnown RBP9.24□□□□□ -0.93
RNU6-238P-201ENST00000363313 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
RNU6-238P-201ENST00000363313 ILDR1Q86SU0 546 aaPredicted RBP9.2□□□□□ -0.94
RNU6-238P-201ENST00000363313 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
RNU6-238P-201ENST00000363313 PSEN1P49768 467 aa9.18□□□□□ -0.94
RNU6-238P-201ENST00000363313 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
RNU6-238P-201ENST00000363313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.94
RNU6-238P-201ENST00000363313 SPOCK2Q92563 424 aa9.13□□□□□ -0.95
RNU6-238P-201ENST00000363313 SPNS2Q8IVW8 549 aa9.11□□□□□ -0.95
RNU6-238P-201ENST00000363313 TRIM41Q8WV44 630 aa9.1□□□□□ -0.95
RNU6-238P-201ENST00000363313 MMRN1Q13201 1228 aa9.09□□□□□ -0.95
RNU6-238P-201ENST00000363313 MARVELD3Q96A59 401 aa9.07□□□□□ -0.96
RNU6-238P-201ENST00000363313 G3V3G9 751 aa9.06□□□□□ -0.96
RNU6-238P-201ENST00000363313 EMP3P54852 163 aa9.06□□□□□ -0.96
RNU6-238P-201ENST00000363313 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
RNU6-238P-201ENST00000363313 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
RNU6-238P-201ENST00000363313 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
RNU6-238P-201ENST00000363313 CABP2Q9NPB3 220 aa9.03□□□□□ -0.96
RNU6-238P-201ENST00000363313 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
RNU6-238P-201ENST00000363313 DOK7Q18PE1 504 aa8.99□□□□□ -0.97
RNU6-238P-201ENST00000363313 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
RNU6-238P-201ENST00000363313 FAM205CA6NFA0 338 aa8.97□□□□□ -0.97
RNU6-238P-201ENST00000363313 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
RNU6-238P-201ENST00000363313 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
RNU6-238P-201ENST00000363313 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
RNU6-238P-201ENST00000363313 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
RNU6-238P-201ENST00000363313 POTEB3A0JP26 581 aa8.94□□□□□ -0.98
RNU6-238P-201ENST00000363313 RIMBP2O15034 1052 aa8.94□□□□□ -0.98
RNU6-238P-201ENST00000363313 SOX12O15370 315 aa8.94□□□□□ -0.98
RNU6-238P-201ENST00000363313 POTEBQ6S5H4 581 aa8.94□□□□□ -0.98
RNU6-238P-201ENST00000363313 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
RNU6-238P-201ENST00000363313 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
RNU6-238P-201ENST00000363313 EFCAB3Q8N7B9 438 aa8.91□□□□□ -0.98
RNU6-238P-201ENST00000363313 ERBB3P21860 1342 aa8.87□□□□□ -0.99
RNU6-238P-201ENST00000363313 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
RNU6-238P-201ENST00000363313 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
RNU6-238P-201ENST00000363313 MICALL2Q8IY33 904 aa8.86□□□□□ -0.99
RNU6-238P-201ENST00000363313 TAOK2Q9UL54 1235 aa8.85□□□□□ -0.99
RNU6-238P-201ENST00000363313 ZNF687Q8N1G0 1237 aa8.82□□□□□ -1
RNU6-238P-201ENST00000363313 PTGER2P43116 358 aa8.81□□□□□ -1
RNU6-238P-201ENST00000363313 GPR153Q6NV75 609 aa8.8□□□□□ -1
RNU6-238P-201ENST00000363313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.79□□□□□ -1
RNU6-238P-201ENST00000363313 TMEM92Q6UXU6 159 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms