RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
LMBR1-202ENST00000359422 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
LMBR1-202ENST00000359422 KCNH8Q96L42 1107 aa21.64■■□□□ 1.06
LMBR1-202ENST00000359422 MYH16Q9H6N6 1097 aa21.61■■□□□ 1.05
LMBR1-202ENST00000359422 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
LMBR1-202ENST00000359422 PLEKHD1A6NEE1 506 aa21.6■■□□□ 1.05
LMBR1-202ENST00000359422 PLEKHG5O94827 1062 aa21.58■■□□□ 1.05
LMBR1-202ENST00000359422 A0A0G2JS52 829 aa21.55■■□□□ 1.04
LMBR1-202ENST00000359422 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
LMBR1-202ENST00000359422 C14orf37Q86TY3 774 aa21.52■■□□□ 1.04
LMBR1-202ENST00000359422 ZBTB7CA1YPR0 619 aa21.51■■□□□ 1.03
LMBR1-202ENST00000359422 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
LMBR1-202ENST00000359422 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
LMBR1-202ENST00000359422 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
LMBR1-202ENST00000359422 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
LMBR1-202ENST00000359422 EEA1Q15075 1411 aa21.45■■□□□ 1.02
LMBR1-202ENST00000359422 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
LMBR1-202ENST00000359422 CFAP53Q96M91 514 aa21.44■■□□□ 1.02
LMBR1-202ENST00000359422 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
LMBR1-202ENST00000359422 BECN1Q14457 450 aa21.44■■□□□ 1.02
LMBR1-202ENST00000359422 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
LMBR1-202ENST00000359422 PPM1GO15355 546 aaPredicted RBP21.42■■□□□ 1.02
LMBR1-202ENST00000359422 GLIPR1L2Q4G1C9 344 aa21.42■■□□□ 1.02
LMBR1-202ENST00000359422 CDCA8Q53HL2 280 aa21.42■■□□□ 1.02
LMBR1-202ENST00000359422 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
LMBR1-202ENST00000359422 DDRGK1Q96HY6 314 aa21.39■■□□□ 1.01
LMBR1-202ENST00000359422 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
LMBR1-202ENST00000359422 SIN3AQ96ST3 1273 aa21.38■■□□□ 1.01
LMBR1-202ENST00000359422 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.012e-6■■■■■ 59.6
LMBR1-202ENST00000359422 NCLP19338 710 aaKnown RBP21.33■■□□□ 1.01
LMBR1-202ENST00000359422 GOLGA6L22H0YM25 854 aa21.32■■□□□ 1
LMBR1-202ENST00000359422 FTSJ3Q8IY81 847 aaKnown RBP21.31■■□□□ 1
LMBR1-202ENST00000359422 TRIM44Q96DX7 344 aaPredicted RBP21.3■■□□□ 1
LMBR1-202ENST00000359422 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
LMBR1-202ENST00000359422 ANP32EQ9BTT0 268 aa21.3■■□□□ 1
LMBR1-202ENST00000359422 KIF27Q86VH2 1401 aa21.29■■□□□ 1
LMBR1-202ENST00000359422 ARID4BQ4LE39 1312 aaPredicted RBP21.28■■□□□ 1
LMBR1-202ENST00000359422 LAS1LQ9Y4W2 734 aaKnown RBP21.27■□□□□ 0.99
LMBR1-202ENST00000359422 MAPK8IP3Q9UPT6 1336 aa21.26■□□□□ 0.99
LMBR1-202ENST00000359422 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
LMBR1-202ENST00000359422 RGS3P49796 1198 aa21.25■□□□□ 0.99
LMBR1-202ENST00000359422 TNNT2P45379 298 aaPredicted RBP21.25■□□□□ 0.99
LMBR1-202ENST00000359422 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
LMBR1-202ENST00000359422 HAP1P54257 671 aaPredicted RBP21.24■□□□□ 0.99
LMBR1-202ENST00000359422 FRAT1Q92837 279 aaPredicted RBP21.24■□□□□ 0.99
LMBR1-202ENST00000359422 POGKQ9P215 609 aa21.23■□□□□ 0.99
LMBR1-202ENST00000359422 PPP4R2Q9NY27 417 aa21.22■□□□□ 0.99
LMBR1-202ENST00000359422 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
LMBR1-202ENST00000359422 CC2D1BQ5T0F9 858 aaKnown RBP21.19■□□□□ 0.98
LMBR1-202ENST00000359422 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
LMBR1-202ENST00000359422 TPRNQ4KMQ1 711 aa21.17■□□□□ 0.98
LMBR1-202ENST00000359422 CASC1Q6TDU7 716 aa21.17■□□□□ 0.98
LMBR1-202ENST00000359422 U2SURPO15042 1029 aaKnown RBP21.16■□□□□ 0.98
LMBR1-202ENST00000359422 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
LMBR1-202ENST00000359422 ZRSR1Q15695 479 aaKnown RBP21.15■□□□□ 0.98
LMBR1-202ENST00000359422 PTMAP06454 111 aaKnown RBP21.14■□□□□ 0.98
LMBR1-202ENST00000359422 B4GALNT3Q6L9W6 998 aa21.14■□□□□ 0.97
LMBR1-202ENST00000359422 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
LMBR1-202ENST00000359422 CCNB3Q8WWL7 1395 aa21.11■□□□□ 0.97
LMBR1-202ENST00000359422 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
LMBR1-202ENST00000359422 TMF1P82094 1093 aa21.08■□□□□ 0.96
LMBR1-202ENST00000359422 CHMP4BQ9H444 224 aaKnown RBP21.05■□□□□ 0.96
LMBR1-202ENST00000359422 DNTTIP2Q5QJE6 756 aaKnown RBP21.05■□□□□ 0.96
LMBR1-202ENST00000359422 MS4A1P11836 297 aa21.04■□□□□ 0.96
LMBR1-202ENST00000359422 ERICH6BQ5W0A0 696 aa21.04■□□□□ 0.96
LMBR1-202ENST00000359422 CCDC180Q9P1Z9 1646 aa21.03■□□□□ 0.96
LMBR1-202ENST00000359422 TIMELESSQ9UNS1 1208 aa21.03■□□□□ 0.96
LMBR1-202ENST00000359422 OS9Q13438 667 aaPredicted RBP21.01■□□□□ 0.95
LMBR1-202ENST00000359422 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
LMBR1-202ENST00000359422 PLCB2Q00722 1185 aa21.01■□□□□ 0.95
LMBR1-202ENST00000359422 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
LMBR1-202ENST00000359422 TAOK2Q9UL54 1235 aa21■□□□□ 0.95
LMBR1-202ENST00000359422 FGD1P98174 961 aa21■□□□□ 0.95
LMBR1-202ENST00000359422 SOX12O15370 315 aa20.99■□□□□ 0.95
LMBR1-202ENST00000359422 CARMIL1Q5VZK9 1371 aa20.99■□□□□ 0.95
LMBR1-202ENST00000359422 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
LMBR1-202ENST00000359422 KCNJ4P48050 445 aa20.97■□□□□ 0.95
LMBR1-202ENST00000359422 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
LMBR1-202ENST00000359422 PNNQ9H307 717 aaKnown RBP20.97■□□□□ 0.95
LMBR1-202ENST00000359422 SAFB2Q14151 953 aaKnown RBP eCLIP20.97■□□□□ 0.95
LMBR1-202ENST00000359422 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
LMBR1-202ENST00000359422 MLECQ14165 292 aa20.94■□□□□ 0.94
LMBR1-202ENST00000359422 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
LMBR1-202ENST00000359422 RTN4Q9NQC3 1192 aaKnown RBP20.94■□□□□ 0.94
LMBR1-202ENST00000359422 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
LMBR1-202ENST00000359422 SOGA1O94964 1423 aa20.92■□□□□ 0.94
LMBR1-202ENST00000359422 TULP1O00294 542 aaPredicted RBP20.92■□□□□ 0.94
LMBR1-202ENST00000359422 PKD2Q13563 968 aa20.92■□□□□ 0.94
LMBR1-202ENST00000359422 NPHP1O15259 732 aa20.91■□□□□ 0.94
LMBR1-202ENST00000359422 FOXD1Q16676 465 aa20.9■□□□□ 0.94
LMBR1-202ENST00000359422 CUX2O14529 1486 aa20.9■□□□□ 0.94
LMBR1-202ENST00000359422 GGT6Q6P531 493 aa20.9■□□□□ 0.94
LMBR1-202ENST00000359422 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
LMBR1-202ENST00000359422 KANK1Q14678 1352 aa20.89■□□□□ 0.93
LMBR1-202ENST00000359422 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
LMBR1-202ENST00000359422 NAP1L5Q96NT1 182 aaPredicted RBP20.88■□□□□ 0.93
LMBR1-202ENST00000359422 KANK4Q5T7N3 995 aaPredicted RBP20.87■□□□□ 0.93
LMBR1-202ENST00000359422 SETD5Q9C0A6 1442 aa20.86■□□□□ 0.93
LMBR1-202ENST00000359422 HDGFP51858 240 aaKnown RBP20.86■□□□□ 0.93
LMBR1-202ENST00000359422 HSCBQ8IWL3 235 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms