RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 MAPK8IP2Q13387 824 aaPredicted RBP9.31□□□□□ -0.92
NF1-202ENST00000358273 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
NF1-202ENST00000358273 ZNF326Q5BKZ1 582 aaKnown RBP9.3□□□□□ -0.92
NF1-202ENST00000358273 DDX10Q13206 875 aaKnown RBP9.29□□□□□ -0.92
NF1-202ENST00000358273 PPP4R2Q9NY27 417 aa9.29□□□□□ -0.92
NF1-202ENST00000358273 BRPF3Q9ULD4 1205 aa9.29□□□□□ -0.92
NF1-202ENST00000358273 TPRNQ4KMQ1 711 aa9.28□□□□□ -0.92
NF1-202ENST00000358273 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
NF1-202ENST00000358273 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
NF1-202ENST00000358273 NCLP19338 710 aaKnown RBP9.26□□□□□ -0.93
NF1-202ENST00000358273 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
NF1-202ENST00000358273 MSH5O43196 834 aa9.26□□□□□ -0.93
NF1-202ENST00000358273 PDE4CQ08493 712 aa9.25□□□□□ -0.93
NF1-202ENST00000358273 IPO9Q96P70 1041 aaKnown RBP9.25□□□□□ -0.93
NF1-202ENST00000358273 TRIM44Q96DX7 344 aaPredicted RBP9.23□□□□□ -0.93
NF1-202ENST00000358273 CANXP27824 592 aaKnown RBP9.22□□□□□ -0.93
NF1-202ENST00000358273 B4GALNT3Q6L9W6 998 aa9.21□□□□□ -0.93
NF1-202ENST00000358273 L1TD1Q5T7N2 865 aaKnown RBP9.21□□□□□ -0.94
NF1-202ENST00000358273 DNTTIP2Q5QJE6 756 aaKnown RBP9.19□□□□□ -0.94
NF1-202ENST00000358273 ZMYND15Q9H091 742 aa9.19□□□□□ -0.94
NF1-202ENST00000358273 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
NF1-202ENST00000358273 FAM9BQ8IZU0 186 aa9.18□□□□□ -0.94
NF1-202ENST00000358273 GSE1Q14687 1217 aa9.16□□□□□ -0.94
NF1-202ENST00000358273 PTMAP06454 111 aaKnown RBP9.16□□□□□ -0.94
NF1-202ENST00000358273 CEP162Q5TB80 1403 aa9.15□□□□□ -0.94
NF1-202ENST00000358273 BECN1Q14457 450 aa9.14□□□□□ -0.95
NF1-202ENST00000358273 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
NF1-202ENST00000358273 RRP9O43818 475 aaKnown RBP9.13□□□□□ -0.95
NF1-202ENST00000358273 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
NF1-202ENST00000358273 PAK3O75914 559 aaPredicted RBP9.12□□□□□ -0.95
NF1-202ENST00000358273 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
NF1-202ENST00000358273 EEA1Q15075 1411 aa9.12□□□□□ -0.95
NF1-202ENST00000358273 MRS2Q9HD23 443 aa9.11□□□□□ -0.95
NF1-202ENST00000358273 FAM43AQ8N2R8 423 aa9.11□□□□□ -0.95
NF1-202ENST00000358273 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
NF1-202ENST00000358273 HIRIP3Q9BW71 556 aaPredicted RBP9.1□□□□□ -0.95
NF1-202ENST00000358273 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
NF1-202ENST00000358273 TNNT3P45378 269 aaPredicted RBP9.09□□□□□ -0.95
NF1-202ENST00000358273 ZNF526Q8TF50 670 aaPredicted RBP9.09□□□□□ -0.95
NF1-202ENST00000358273 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
NF1-202ENST00000358273 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
NF1-202ENST00000358273 PDIA4P13667 645 aaKnown RBP9.07□□□□□ -0.96
NF1-202ENST00000358273 RBM10P98175 930 aaKnown RBP9.06□□□□□ -0.96
NF1-202ENST00000358273 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
NF1-202ENST00000358273 MSNP26038 577 aaKnown RBP9.06□□□□□ -0.96
NF1-202ENST00000358273 APPP05067 770 aa9.05□□□□□ -0.96
NF1-202ENST00000358273 GOLGA6L3A6NEY3 463 aa9.05□□□□□ -0.96
NF1-202ENST00000358273 FRAT1Q92837 279 aaPredicted RBP9.04□□□□□ -0.96
NF1-202ENST00000358273 CCER2I3L3R5 266 aa9.03□□□□□ -0.96
NF1-202ENST00000358273 CLIP1P30622 1438 aa9.02□□□□□ -0.97
NF1-202ENST00000358273 RB1CC1Q8TDY2 1594 aa9.01□□□□□ -0.97
NF1-202ENST00000358273 GON4LQ3T8J9 2241 aa9.01□□□□□ -0.97
NF1-202ENST00000358273 FAM13BQ9NYF5 915 aa9□□□□□ -0.97
NF1-202ENST00000358273 PTMSP20962 102 aa8.99□□□□□ -0.97
NF1-202ENST00000358273 RGS3P49796 1198 aa8.99□□□□□ -0.97
NF1-202ENST00000358273 TAF7LQ5H9L4 462 aa8.98□□□□□ -0.97
NF1-202ENST00000358273 SLKQ9H2G2 1235 aaPredicted RBP8.98□□□□□ -0.97
NF1-202ENST00000358273 TPM2P07951 284 aa8.98□□□□□ -0.97
NF1-202ENST00000358273 ZNF771Q7L3S4 317 aaPredicted RBP8.97□□□□□ -0.97
NF1-202ENST00000358273 AEBP1Q8IUX7 1158 aa8.96□□□□□ -0.97
NF1-202ENST00000358273 BCL11BQ9C0K0 894 aaPredicted RBP8.96□□□□□ -0.97
NF1-202ENST00000358273 PLCB2Q00722 1185 aa8.96□□□□□ -0.97
NF1-202ENST00000358273 TCERG1O14776 1098 aaKnown RBP8.96□□□□□ -0.97
NF1-202ENST00000358273 BBXQ8WY36 941 aaPredicted RBP8.96□□□□□ -0.98
NF1-202ENST00000358273 ABCC9O60706 1549 aa8.96□□□□□ -0.98
NF1-202ENST00000358273 ZHX1Q9UKY1 873 aaPredicted RBP8.95□□□□□ -0.98
NF1-202ENST00000358273 GOLGA6L22H0YM25 854 aa8.95□□□□□ -0.98
NF1-202ENST00000358273 E9PSI1 815 aa8.95□□□□□ -0.98
NF1-202ENST00000358273 CHMP4AQ9BY43 222 aa8.95□□□□□ -0.98
NF1-202ENST00000358273 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
NF1-202ENST00000358273 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
NF1-202ENST00000358273 CHAF1AQ13111 956 aaPredicted RBP8.94□□□□□ -0.98
NF1-202ENST00000358273 FGD1P98174 961 aa8.94□□□□□ -0.98
NF1-202ENST00000358273 PATL2C9JE40 543 aaKnown RBP8.94□□□□□ -0.98
NF1-202ENST00000358273 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.94□□□□□ -0.98
NF1-202ENST00000358273 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
NF1-202ENST00000358273 RBM25P49756 843 aaKnown RBP8.93□□□□□ -0.98
NF1-202ENST00000358273 SLC4A3P48751 1232 aa8.93□□□□□ -0.98
NF1-202ENST00000358273 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
NF1-202ENST00000358273 NAP1L2Q9ULW6 460 aaPredicted RBP8.92□□□□□ -0.98
NF1-202ENST00000358273 PDE4AP27815 886 aa8.92□□□□□ -0.98
NF1-202ENST00000358273 BAZ1BQ9UIG0 1483 aaKnown RBP8.91□□□□□ -0.98
NF1-202ENST00000358273 AEBP2Q6ZN18 517 aaPredicted RBP8.91□□□□□ -0.98
NF1-202ENST00000358273 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
NF1-202ENST00000358273 GOLGA3Q08378 1498 aa8.91□□□□□ -0.98
NF1-202ENST00000358273 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
NF1-202ENST00000358273 MAP7D2Q96T17 732 aa8.9□□□□□ -0.99
NF1-202ENST00000358273 SIN3AQ96ST3 1273 aa8.89□□□□□ -0.99
NF1-202ENST00000358273 CALRP27797 417 aaKnown RBP8.88□□□□□ -0.99
NF1-202ENST00000358273 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.992e-6■■■■□ 22.3
NF1-202ENST00000358273 NACADO15069 1562 aa8.88□□□□□ -0.99
NF1-202ENST00000358273 MTERF4Q7Z6M4 381 aaKnown RBP8.88□□□□□ -0.99
NF1-202ENST00000358273 TMC1Q8TDI8 760 aa8.88□□□□□ -0.99
NF1-202ENST00000358273 CHMP4BQ9H444 224 aaKnown RBP8.87□□□□□ -0.99
NF1-202ENST00000358273 KIAA1211Q6ZU35 1233 aa8.87□□□□□ -0.99
NF1-202ENST00000358273 CFAP65Q6ZU64 1925 aaKnown RBP8.87□□□□□ -0.99
NF1-202ENST00000358273 FRAT2O75474 233 aaPredicted RBP8.87□□□□□ -0.99
NF1-202ENST00000358273 MYH16Q9H6N6 1097 aa8.86□□□□□ -0.99
NF1-202ENST00000358273 CALD1Q05682 793 aaKnown RBP8.85□□□□□ -0.99
NF1-202ENST00000358273 ZBED9Q6R2W3 1325 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms