RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
RTFDC1-202ENST00000357348 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.74
RTFDC1-202ENST00000357348 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
RTFDC1-202ENST00000357348 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
RTFDC1-202ENST00000357348 CLIP1P30622 1438 aa19.59■□□□□ 0.73
RTFDC1-202ENST00000357348 CTTNBP2Q8WZ74 1663 aa19.58■□□□□ 0.73
RTFDC1-202ENST00000357348 SYNJ2O15056 1496 aa19.57■□□□□ 0.72
RTFDC1-202ENST00000357348 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
RTFDC1-202ENST00000357348 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
RTFDC1-202ENST00000357348 CHD1O14646 1710 aa19.52■□□□□ 0.72
RTFDC1-202ENST00000357348 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
RTFDC1-202ENST00000357348 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
RTFDC1-202ENST00000357348 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
RTFDC1-202ENST00000357348 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
RTFDC1-202ENST00000357348 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
RTFDC1-202ENST00000357348 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
RTFDC1-202ENST00000357348 KIAA0586Q9BVV6 1533 aa19.4■□□□□ 0.7
RTFDC1-202ENST00000357348 FHOD3Q2V2M9 1422 aa19.39■□□□□ 0.69
RTFDC1-202ENST00000357348 NUP160Q12769 1436 aa19.39■□□□□ 0.69
RTFDC1-202ENST00000357348 VPS8Q8N3P4 1428 aa19.34■□□□□ 0.69
RTFDC1-202ENST00000357348 JPH4Q96JJ6 628 aa19.33■□□□□ 0.68
RTFDC1-202ENST00000357348 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
RTFDC1-202ENST00000357348 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
RTFDC1-202ENST00000357348 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
RTFDC1-202ENST00000357348 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
RTFDC1-202ENST00000357348 DISP1Q96F81 1524 aa19.26■□□□□ 0.67
RTFDC1-202ENST00000357348 KIAA0556O60303 1618 aa19.24■□□□□ 0.67
RTFDC1-202ENST00000357348 APLP2Q06481 763 aa19.24■□□□□ 0.67
RTFDC1-202ENST00000357348 PRG4Q92954 1404 aaPredicted RBP19.22■□□□□ 0.67
RTFDC1-202ENST00000357348 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
RTFDC1-202ENST00000357348 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
RTFDC1-202ENST00000357348 ARID3CA6NKF2 412 aa19.2■□□□□ 0.66
RTFDC1-202ENST00000357348 CLASP1Q7Z460 1538 aa19.19■□□□□ 0.66
RTFDC1-202ENST00000357348 FMN1Q68DA7 1419 aa19.19■□□□□ 0.66
RTFDC1-202ENST00000357348 CARMIL2Q6F5E8 1435 aa19.19■□□□□ 0.66
RTFDC1-202ENST00000357348 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
RTFDC1-202ENST00000357348 SHROOM2Q13796 1616 aa19.14■□□□□ 0.66
RTFDC1-202ENST00000357348 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.65
RTFDC1-202ENST00000357348 KANK4Q5T7N3 995 aaPredicted RBP19.13■□□□□ 0.65
RTFDC1-202ENST00000357348 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
RTFDC1-202ENST00000357348 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
RTFDC1-202ENST00000357348 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
RTFDC1-202ENST00000357348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.09■□□□□ 0.65
RTFDC1-202ENST00000357348 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
RTFDC1-202ENST00000357348 CCER1Q8TC90 406 aaPredicted RBP19.08■□□□□ 0.65
RTFDC1-202ENST00000357348 PTPRGP23470 1445 aa19.06■□□□□ 0.64
RTFDC1-202ENST00000357348 TIAM1Q13009 1591 aa19.05■□□□□ 0.64
RTFDC1-202ENST00000357348 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
RTFDC1-202ENST00000357348 RAPGEF6Q8TEU7 1601 aa19.04■□□□□ 0.64
RTFDC1-202ENST00000357348 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
RTFDC1-202ENST00000357348 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
RTFDC1-202ENST00000357348 CDK13Q14004 1512 aaKnown RBP19.02■□□□□ 0.64
RTFDC1-202ENST00000357348 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
RTFDC1-202ENST00000357348 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
RTFDC1-202ENST00000357348 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
RTFDC1-202ENST00000357348 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
RTFDC1-202ENST00000357348 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
RTFDC1-202ENST00000357348 ABCA8O94911 1581 aa18.95■□□□□ 0.62
RTFDC1-202ENST00000357348 MTUS2Q5JR59 1369 aa18.94■□□□□ 0.62
RTFDC1-202ENST00000357348 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
RTFDC1-202ENST00000357348 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
RTFDC1-202ENST00000357348 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
RTFDC1-202ENST00000357348 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
RTFDC1-202ENST00000357348 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
RTFDC1-202ENST00000357348 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
RTFDC1-202ENST00000357348 ATP10BO94823 1461 aa18.87■□□□□ 0.61
RTFDC1-202ENST00000357348 ABCC2Q92887 1545 aa18.85■□□□□ 0.61
RTFDC1-202ENST00000357348 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
RTFDC1-202ENST00000357348 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
RTFDC1-202ENST00000357348 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.6
RTFDC1-202ENST00000357348 EHBP1L1Q8N3D4 1523 aa18.82■□□□□ 0.6
RTFDC1-202ENST00000357348 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
RTFDC1-202ENST00000357348 RIMBP3CA6NJZ7 1639 aa18.81■□□□□ 0.6
RTFDC1-202ENST00000357348 RIMBP3BA6NNM3 1639 aa18.81■□□□□ 0.6
RTFDC1-202ENST00000357348 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
RTFDC1-202ENST00000357348 RIMBP3Q9UFD9 1639 aa18.81■□□□□ 0.6
RTFDC1-202ENST00000357348 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
RTFDC1-202ENST00000357348 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
RTFDC1-202ENST00000357348 NCOA2Q15596 1464 aa18.8■□□□□ 0.6
RTFDC1-202ENST00000357348 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
RTFDC1-202ENST00000357348 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
RTFDC1-202ENST00000357348 ITGAEP38570 1179 aa18.76■□□□□ 0.59
RTFDC1-202ENST00000357348 KIF14Q15058 1648 aa18.76■□□□□ 0.59
RTFDC1-202ENST00000357348 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
RTFDC1-202ENST00000357348 TROQ12816 1431 aaPredicted RBP18.75■□□□□ 0.59
RTFDC1-202ENST00000357348 MYT1Q01538 1121 aa18.75■□□□□ 0.59
RTFDC1-202ENST00000357348 UHRF1BP1LA0JNW5 1464 aa18.75■□□□□ 0.59
RTFDC1-202ENST00000357348 FAM50AQ14320 339 aaKnown RBP18.74■□□□□ 0.59
RTFDC1-202ENST00000357348 KDM5BQ9UGL1 1544 aa18.72■□□□□ 0.59
RTFDC1-202ENST00000357348 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
RTFDC1-202ENST00000357348 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
RTFDC1-202ENST00000357348 RRBP1Q9P2E9 1410 aaKnown RBP18.69■□□□□ 0.58
RTFDC1-202ENST00000357348 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
RTFDC1-202ENST00000357348 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
RTFDC1-202ENST00000357348 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
RTFDC1-202ENST00000357348 ZNF644Q9H582 1327 aaPredicted RBP18.62■□□□□ 0.57
RTFDC1-202ENST00000357348 ASXL2Q76L83 1435 aa18.61■□□□□ 0.57
RTFDC1-202ENST00000357348 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
RTFDC1-202ENST00000357348 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
RTFDC1-202ENST00000357348 CDC42BPAQ5VT25 1732 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms