RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
PTBP1-203ENST00000356948 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
PTBP1-203ENST00000356948 NESP48681 1621 aa22.22■■□□□ 1.15
PTBP1-203ENST00000356948 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
PTBP1-203ENST00000356948 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
PTBP1-203ENST00000356948 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
PTBP1-203ENST00000356948 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
PTBP1-203ENST00000356948 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
PTBP1-203ENST00000356948 MAPKBP1O60336 1514 aa22.12■■□□□ 1.13
PTBP1-203ENST00000356948 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
PTBP1-203ENST00000356948 PCF11O94913 1555 aaKnown RBP22.05■■□□□ 1.12
PTBP1-203ENST00000356948 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
PTBP1-203ENST00000356948 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
PTBP1-203ENST00000356948 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
PTBP1-203ENST00000356948 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
PTBP1-203ENST00000356948 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
PTBP1-203ENST00000356948 WDR97A6NE52 1622 aa21.99■■□□□ 1.11
PTBP1-203ENST00000356948 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
PTBP1-203ENST00000356948 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
PTBP1-203ENST00000356948 SUPT16HQ9Y5B9 1047 aaKnown RBP21.94■■□□□ 1.1
PTBP1-203ENST00000356948 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
PTBP1-203ENST00000356948 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
PTBP1-203ENST00000356948 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
PTBP1-203ENST00000356948 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
PTBP1-203ENST00000356948 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
PTBP1-203ENST00000356948 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
PTBP1-203ENST00000356948 BCANQ96GW7 911 aa21.86■■□□□ 1.09
PTBP1-203ENST00000356948 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
PTBP1-203ENST00000356948 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
PTBP1-203ENST00000356948 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
PTBP1-203ENST00000356948 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
PTBP1-203ENST00000356948 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
PTBP1-203ENST00000356948 TRIM52Q96A61 297 aa21.77■■□□□ 1.08
PTBP1-203ENST00000356948 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.08
PTBP1-203ENST00000356948 FYCO1Q9BQS8 1478 aa21.77■■□□□ 1.08
PTBP1-203ENST00000356948 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
PTBP1-203ENST00000356948 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
PTBP1-203ENST00000356948 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.073e-8■■■■■ 33.8
PTBP1-203ENST00000356948 LRRIQ1Q96JM4 1722 aa21.73■■□□□ 1.07
PTBP1-203ENST00000356948 FOXD1Q16676 465 aa21.7■■□□□ 1.06
PTBP1-203ENST00000356948 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
PTBP1-203ENST00000356948 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
PTBP1-203ENST00000356948 CCDC18Q5T9S5 1454 aa21.68■■□□□ 1.06
PTBP1-203ENST00000356948 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
PTBP1-203ENST00000356948 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
PTBP1-203ENST00000356948 NCOA2Q15596 1464 aa21.66■■□□□ 1.06
PTBP1-203ENST00000356948 EFCAB5A4FU69 1503 aa21.66■■□□□ 1.06
PTBP1-203ENST00000356948 MAGI3Q5TCQ9 1506 aa21.65■■□□□ 1.06
PTBP1-203ENST00000356948 TONSLQ96HA7 1378 aa21.65■■□□□ 1.06
PTBP1-203ENST00000356948 CUL7Q14999 1698 aa21.64■■□□□ 1.05
PTBP1-203ENST00000356948 FKBP8Q14318 412 aa21.63■■□□□ 1.05
PTBP1-203ENST00000356948 NAIPQ13075 1403 aa21.62■■□□□ 1.05
PTBP1-203ENST00000356948 TSHZ2Q9NRE2 1034 aa21.59■■□□□ 1.05
PTBP1-203ENST00000356948 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
PTBP1-203ENST00000356948 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
PTBP1-203ENST00000356948 MYOM3Q5VTT5 1437 aa21.57■■□□□ 1.04
PTBP1-203ENST00000356948 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
PTBP1-203ENST00000356948 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
PTBP1-203ENST00000356948 PTPN23Q9H3S7 1636 aa21.56■■□□□ 1.04
PTBP1-203ENST00000356948 SAMD9Q5K651 1589 aa21.55■■□□□ 1.04
PTBP1-203ENST00000356948 ANP32CO43423 234 aa21.55■■□□□ 1.04
PTBP1-203ENST00000356948 UACAQ9BZF9 1416 aa21.54■■□□□ 1.04
PTBP1-203ENST00000356948 KDM6BO15054 1643 aa21.54■■□□□ 1.04
PTBP1-203ENST00000356948 CDK13Q14004 1512 aaKnown RBP21.53■■□□□ 1.04
PTBP1-203ENST00000356948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.043e-7■■■□□ 16.4
PTBP1-203ENST00000356948 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
PTBP1-203ENST00000356948 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.04
PTBP1-203ENST00000356948 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
PTBP1-203ENST00000356948 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
PTBP1-203ENST00000356948 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
PTBP1-203ENST00000356948 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
PTBP1-203ENST00000356948 KDM5BQ9UGL1 1544 aa21.47■■□□□ 1.03
PTBP1-203ENST00000356948 IRX6P78412 446 aaPredicted RBP21.47■■□□□ 1.03
PTBP1-203ENST00000356948 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
PTBP1-203ENST00000356948 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
PTBP1-203ENST00000356948 C11orf95C9JLR9 678 aaPredicted RBP21.46■■□□□ 1.03
PTBP1-203ENST00000356948 TARBP1Q13395 1621 aaKnown RBP21.45■■□□□ 1.02
PTBP1-203ENST00000356948 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
PTBP1-203ENST00000356948 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
PTBP1-203ENST00000356948 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
PTBP1-203ENST00000356948 SUPT6HQ7KZ85 1726 aaKnown RBP21.43■■□□□ 1.02
PTBP1-203ENST00000356948 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
PTBP1-203ENST00000356948 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
PTBP1-203ENST00000356948 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
PTBP1-203ENST00000356948 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
PTBP1-203ENST00000356948 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.02
PTBP1-203ENST00000356948 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.01
PTBP1-203ENST00000356948 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.01
PTBP1-203ENST00000356948 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
PTBP1-203ENST00000356948 HNRNPUQ00839 825 aaKnown RBP eCLIP21.37■■□□□ 1.01
PTBP1-203ENST00000356948 NBPF8Q3BBV2 869 aa21.36■■□□□ 1.01
PTBP1-203ENST00000356948 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
PTBP1-203ENST00000356948 FBLN2P98095 1184 aa21.32■■□□□ 1
PTBP1-203ENST00000356948 IQGAP2Q13576 1575 aa21.32■■□□□ 1
PTBP1-203ENST00000356948 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
PTBP1-203ENST00000356948 PBRM1Q86U86 1689 aa21.31■■□□□ 1
PTBP1-203ENST00000356948 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
PTBP1-203ENST00000356948 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.991e-7■□□□□ 8.1
PTBP1-203ENST00000356948 ZNF326Q5BKZ1 582 aaKnown RBP21.26■□□□□ 0.99
PTBP1-203ENST00000356948 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms