RNA–Protein interactions for RNA: ENST00000356770.8

PBRM1-203, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 7,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-203ENST00000356770 PRM3Q9NNZ6 103 aa10.96□□□□□ -0.66
PBRM1-203ENST00000356770 SENP3Q9H4L4 574 aaPredicted RBP10.95□□□□□ -0.66
PBRM1-203ENST00000356770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■■□□ 19.2
PBRM1-203ENST00000356770 BECN1Q14457 450 aa10.93□□□□□ -0.66
PBRM1-203ENST00000356770 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
PBRM1-203ENST00000356770 GOLGA6L6A8MZA4 724 aa10.89□□□□□ -0.67
PBRM1-203ENST00000356770 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
PBRM1-203ENST00000356770 ARID4BQ4LE39 1312 aaPredicted RBP10.89□□□□□ -0.67
PBRM1-203ENST00000356770 ANP32EQ9BTT0 268 aa10.88□□□□□ -0.67
PBRM1-203ENST00000356770 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
PBRM1-203ENST00000356770 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
PBRM1-203ENST00000356770 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
PBRM1-203ENST00000356770 NAP1L2Q9ULW6 460 aaPredicted RBP10.87□□□□□ -0.67
PBRM1-203ENST00000356770 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
PBRM1-203ENST00000356770 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
PBRM1-203ENST00000356770 FGD1P98174 961 aa10.85□□□□□ -0.67
PBRM1-203ENST00000356770 PPP1R15AO75807 674 aaPredicted RBP10.84□□□□□ -0.67
PBRM1-203ENST00000356770 ISY1Q9ULR0 285 aaKnown RBP10.84□□□□□ -0.67
PBRM1-203ENST00000356770 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
PBRM1-203ENST00000356770 ACIN1Q9UKV3 1341 aaKnown RBP10.82□□□□□ -0.68
PBRM1-203ENST00000356770 NRDCO43847 1150 aa10.82□□□□□ -0.68
PBRM1-203ENST00000356770 DDX10Q13206 875 aaKnown RBP10.81□□□□□ -0.68
PBRM1-203ENST00000356770 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-203ENST00000356770 NOC3LQ8WTT2 800 aaKnown RBP10.79□□□□□ -0.68
PBRM1-203ENST00000356770 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
PBRM1-203ENST00000356770 LAS1LQ9Y4W2 734 aaKnown RBP10.79□□□□□ -0.68
PBRM1-203ENST00000356770 IRX6P78412 446 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-203ENST00000356770 KIAA2012Q0VF49 1180 aa10.79□□□□□ -0.68
PBRM1-203ENST00000356770 OS9Q13438 667 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-203ENST00000356770 KCNJ4P48050 445 aa10.78□□□□□ -0.68
PBRM1-203ENST00000356770 FTSJ3Q8IY81 847 aaKnown RBP10.78□□□□□ -0.68
PBRM1-203ENST00000356770 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-203ENST00000356770 L1TD1Q5T7N2 865 aaKnown RBP10.78□□□□□ -0.68
PBRM1-203ENST00000356770 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
PBRM1-203ENST00000356770 PNNQ9H307 717 aaKnown RBP10.76□□□□□ -0.69
PBRM1-203ENST00000356770 CHAF1AQ13111 956 aaPredicted RBP10.76□□□□□ -0.69
PBRM1-203ENST00000356770 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
PBRM1-203ENST00000356770 DRC7Q8IY82 874 aa10.75□□□□□ -0.69
PBRM1-203ENST00000356770 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
PBRM1-203ENST00000356770 HSP90AB1P08238 724 aaKnown RBP10.73□□□□□ -0.69
PBRM1-203ENST00000356770 CHIC2Q9UKJ5 165 aa10.73□□□□□ -0.69
PBRM1-203ENST00000356770 PDE4CQ08493 712 aa10.72□□□□□ -0.69
PBRM1-203ENST00000356770 GNL2Q13823 731 aaKnown RBP10.71□□□□□ -0.69
PBRM1-203ENST00000356770 CFAP53Q96M91 514 aa10.71□□□□□ -0.7
PBRM1-203ENST00000356770 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
PBRM1-203ENST00000356770 A0A0U1RQG5 324 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-203ENST00000356770 TSPY4P0CV99 314 aa10.68□□□□□ -0.7
PBRM1-203ENST00000356770 TSPY10P0CW01 314 aa10.68□□□□□ -0.7
PBRM1-203ENST00000356770 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
PBRM1-203ENST00000356770 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
PBRM1-203ENST00000356770 KCNH8Q96L42 1107 aa10.65□□□□□ -0.7
PBRM1-203ENST00000356770 MSNP26038 577 aaKnown RBP10.65□□□□□ -0.7
PBRM1-203ENST00000356770 CHMP7Q8WUX9 453 aaPredicted RBP10.65□□□□□ -0.7
PBRM1-203ENST00000356770 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
PBRM1-203ENST00000356770 FBXO3Q9UK99 471 aa10.65□□□□□ -0.71
PBRM1-203ENST00000356770 MAPK8IP3Q9UPT6 1336 aa10.65□□□□□ -0.71
PBRM1-203ENST00000356770 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
PBRM1-203ENST00000356770 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
PBRM1-203ENST00000356770 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
PBRM1-203ENST00000356770 MCCP23508 829 aa10.6□□□□□ -0.71
PBRM1-203ENST00000356770 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
PBRM1-203ENST00000356770 TNNT3P45378 269 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-203ENST00000356770 HIRIP3Q9BW71 556 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-203ENST00000356770 FRAT1Q92837 279 aaPredicted RBP10.6□□□□□ -0.71
PBRM1-203ENST00000356770 CHMP4BQ9H444 224 aaKnown RBP10.59□□□□□ -0.71
PBRM1-203ENST00000356770 RGL3Q3MIN7 710 aa10.59□□□□□ -0.71
PBRM1-203ENST00000356770 GOLGA6L1Q8N7Z2 621 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 CEP89Q96ST8 783 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 RGS3P49796 1198 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 POGKQ9P215 609 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 G3V3G9 751 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
PBRM1-203ENST00000356770 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
PBRM1-203ENST00000356770 HSCBQ8IWL3 235 aa10.57□□□□□ -0.72
PBRM1-203ENST00000356770 ARID3AQ99856 593 aa10.56□□□□□ -0.72
PBRM1-203ENST00000356770 CDCA8Q53HL2 280 aa10.55□□□□□ -0.72
PBRM1-203ENST00000356770 U2SURPO15042 1029 aaKnown RBP10.55□□□□□ -0.72
PBRM1-203ENST00000356770 CREBRFQ8IUR6 639 aa10.55□□□□□ -0.72
PBRM1-203ENST00000356770 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
PBRM1-203ENST00000356770 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-203ENST00000356770 SOX12O15370 315 aa10.55□□□□□ -0.72
PBRM1-203ENST00000356770 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
PBRM1-203ENST00000356770 CNKSR2Q8WXI2 1034 aa10.54□□□□□ -0.72
PBRM1-203ENST00000356770 VPS53Q5VIR6 699 aa10.54□□□□□ -0.72
PBRM1-203ENST00000356770 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
PBRM1-203ENST00000356770 TPM4P67936 248 aa10.53□□□□□ -0.72
PBRM1-203ENST00000356770 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
PBRM1-203ENST00000356770 ZNF330Q9Y3S2 320 aaPredicted RBP10.53□□□□□ -0.72
PBRM1-203ENST00000356770 MS4A1P11836 297 aa10.52□□□□□ -0.73
PBRM1-203ENST00000356770 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.73
PBRM1-203ENST00000356770 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
PBRM1-203ENST00000356770 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
PBRM1-203ENST00000356770 USP35Q9P2H5 1018 aa10.5□□□□□ -0.73
PBRM1-203ENST00000356770 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
PBRM1-203ENST00000356770 MLECQ14165 292 aa10.49□□□□□ -0.73
PBRM1-203ENST00000356770 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
PBRM1-203ENST00000356770 RRP7BPQ9NSQ0 103 aa10.48□□□□□ -0.73
PBRM1-203ENST00000356770 SETQ01105 290 aaPredicted RBP10.48□□□□□ -0.73
PBRM1-203ENST00000356770 GORABQ5T7V8 394 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms