RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 ARAP1Q96P48 1450 aa25.51■■□□□ 1.67
SLC39A1-202ENST00000356205 ARHGAP35Q9NRY4 1499 aa25.51■■□□□ 1.67
SLC39A1-202ENST00000356205 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
SLC39A1-202ENST00000356205 TRIM26Q12899 539 aaPredicted RBP25.49■■□□□ 1.67
SLC39A1-202ENST00000356205 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
SLC39A1-202ENST00000356205 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
SLC39A1-202ENST00000356205 EFCAB5A4FU69 1503 aa25.44■■□□□ 1.66
SLC39A1-202ENST00000356205 IQGAP2Q13576 1575 aa25.38■■□□□ 1.65
SLC39A1-202ENST00000356205 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
SLC39A1-202ENST00000356205 SAMD9Q5K651 1589 aa25.34■■□□□ 1.65
SLC39A1-202ENST00000356205 KIAA0586Q9BVV6 1533 aa25.33■■□□□ 1.64
SLC39A1-202ENST00000356205 CEP170Q5SW79 1584 aa25.3■■□□□ 1.64
SLC39A1-202ENST00000356205 NUP160Q12769 1436 aa25.29■■□□□ 1.64
SLC39A1-202ENST00000356205 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SLC39A1-202ENST00000356205 FHOD3Q2V2M9 1422 aa25.28■■□□□ 1.64
SLC39A1-202ENST00000356205 UGGT2Q9NYU1 1516 aa25.27■■□□□ 1.64
SLC39A1-202ENST00000356205 P3H3Q8IVL6 736 aa25.23■■□□□ 1.63
SLC39A1-202ENST00000356205 PPARGC1BQ86YN6 1023 aaKnown RBP25.22■■□□□ 1.63
SLC39A1-202ENST00000356205 CHD1O14646 1710 aa25.2■■□□□ 1.62
SLC39A1-202ENST00000356205 APLP2Q06481 763 aa25.2■■□□□ 1.62
SLC39A1-202ENST00000356205 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
SLC39A1-202ENST00000356205 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
SLC39A1-202ENST00000356205 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
SLC39A1-202ENST00000356205 FYCO1Q9BQS8 1478 aa25.13■■□□□ 1.61
SLC39A1-202ENST00000356205 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
SLC39A1-202ENST00000356205 DISP1Q96F81 1524 aa25.12■■□□□ 1.61
SLC39A1-202ENST00000356205 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
SLC39A1-202ENST00000356205 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
SLC39A1-202ENST00000356205 MAP3K1Q13233 1512 aa25.1■■□□□ 1.61
SLC39A1-202ENST00000356205 TIAM1Q13009 1591 aa25.06■■□□□ 1.6
SLC39A1-202ENST00000356205 TTBK1Q5TCY1 1321 aaPredicted RBP25.05■■□□□ 1.6
SLC39A1-202ENST00000356205 JPH4Q96JJ6 628 aa25.03■■□□□ 1.6
SLC39A1-202ENST00000356205 CFAP43Q8NDM7 1665 aa25.03■■□□□ 1.6
SLC39A1-202ENST00000356205 CARMIL2Q6F5E8 1435 aa25.01■■□□□ 1.6
SLC39A1-202ENST00000356205 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
SLC39A1-202ENST00000356205 KANK4Q5T7N3 995 aaPredicted RBP24.97■■□□□ 1.59
SLC39A1-202ENST00000356205 SHROOM2Q13796 1616 aa24.96■■□□□ 1.59
SLC39A1-202ENST00000356205 ATP1B4Q9UN42 357 aaPredicted RBP24.95■■□□□ 1.59
SLC39A1-202ENST00000356205 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
SLC39A1-202ENST00000356205 HECW1Q76N89 1606 aa24.95■■□□□ 1.58
SLC39A1-202ENST00000356205 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
SLC39A1-202ENST00000356205 PRG4Q92954 1404 aaPredicted RBP24.91■■□□□ 1.58
SLC39A1-202ENST00000356205 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
SLC39A1-202ENST00000356205 LRRIQ1Q96JM4 1722 aa24.89■■□□□ 1.57
SLC39A1-202ENST00000356205 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
SLC39A1-202ENST00000356205 EPRSP07814 1512 aaKnown RBP24.83■■□□□ 1.57
SLC39A1-202ENST00000356205 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
SLC39A1-202ENST00000356205 PLB1Q6P1J6 1458 aa24.78■■□□□ 1.56
SLC39A1-202ENST00000356205 EHBP1L1Q8N3D4 1523 aa24.77■■□□□ 1.56
SLC39A1-202ENST00000356205 MTUS2Q5JR59 1369 aa24.76■■□□□ 1.55
SLC39A1-202ENST00000356205 CDK13Q14004 1512 aaKnown RBP24.76■■□□□ 1.55
SLC39A1-202ENST00000356205 ABCA8O94911 1581 aa24.76■■□□□ 1.55
SLC39A1-202ENST00000356205 PTPRGP23470 1445 aa24.75■■□□□ 1.55
SLC39A1-202ENST00000356205 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
SLC39A1-202ENST00000356205 RRBP1Q9P2E9 1410 aaKnown RBP24.73■■□□□ 1.55
SLC39A1-202ENST00000356205 MAGI3Q5TCQ9 1506 aa24.71■■□□□ 1.55
SLC39A1-202ENST00000356205 PHLDB1Q86UU1 1377 aa24.68■■□□□ 1.54
SLC39A1-202ENST00000356205 SUPT6HQ7KZ85 1726 aaKnown RBP24.67■■□□□ 1.54
SLC39A1-202ENST00000356205 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
SLC39A1-202ENST00000356205 CCNB3Q8WWL7 1395 aa24.64■■□□□ 1.54
SLC39A1-202ENST00000356205 NCOA2Q15596 1464 aa24.63■■□□□ 1.53
SLC39A1-202ENST00000356205 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
SLC39A1-202ENST00000356205 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
SLC39A1-202ENST00000356205 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
SLC39A1-202ENST00000356205 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
SLC39A1-202ENST00000356205 UACAQ9BZF9 1416 aa24.62■■□□□ 1.53
SLC39A1-202ENST00000356205 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
SLC39A1-202ENST00000356205 ABCC2Q92887 1545 aa24.57■■□□□ 1.52
SLC39A1-202ENST00000356205 ATP10BO94823 1461 aa24.57■■□□□ 1.52
SLC39A1-202ENST00000356205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
SLC39A1-202ENST00000356205 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
SLC39A1-202ENST00000356205 TROQ12816 1431 aaPredicted RBP24.55■■□□□ 1.52
SLC39A1-202ENST00000356205 MYOM3Q5VTT5 1437 aa24.54■■□□□ 1.52
SLC39A1-202ENST00000356205 FGD6Q6ZV73 1430 aa24.53■■□□□ 1.52
SLC39A1-202ENST00000356205 UHRF1BP1LA0JNW5 1464 aa24.52■■□□□ 1.52
SLC39A1-202ENST00000356205 ADCY10Q96PN6 1610 aa24.5■■□□□ 1.51
SLC39A1-202ENST00000356205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.49■■□□□ 1.51
SLC39A1-202ENST00000356205 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
SLC39A1-202ENST00000356205 FAM50AQ14320 339 aaKnown RBP24.42■■□□□ 1.5
SLC39A1-202ENST00000356205 KIF14Q15058 1648 aa24.42■■□□□ 1.5
SLC39A1-202ENST00000356205 MIA2Q96PC5 1412 aa24.42■■□□□ 1.5
SLC39A1-202ENST00000356205 KDM5BQ9UGL1 1544 aa24.41■■□□□ 1.5
SLC39A1-202ENST00000356205 PTPN23Q9H3S7 1636 aa24.4■■□□□ 1.5
SLC39A1-202ENST00000356205 TCOF1Q13428 1488 aaKnown RBP24.39■■□□□ 1.49
SLC39A1-202ENST00000356205 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.49
SLC39A1-202ENST00000356205 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
SLC39A1-202ENST00000356205 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
SLC39A1-202ENST00000356205 ITGAEP38570 1179 aa24.34■■□□□ 1.49
SLC39A1-202ENST00000356205 ABCC10Q5T3U5 1492 aa24.34■■□□□ 1.49
SLC39A1-202ENST00000356205 GPATCH8Q9UKJ3 1502 aaKnown RBP24.31■■□□□ 1.48
SLC39A1-202ENST00000356205 CDC42BPAQ5VT25 1732 aa24.25■■□□□ 1.47
SLC39A1-202ENST00000356205 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
SLC39A1-202ENST00000356205 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
SLC39A1-202ENST00000356205 CAMSAP2Q08AD1 1489 aa24.21■■□□□ 1.47
SLC39A1-202ENST00000356205 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
SLC39A1-202ENST00000356205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.21■■□□□ 1.476e-6■■■■□ 21.5
SLC39A1-202ENST00000356205 TTC37Q6PGP7 1564 aa24.2■■□□□ 1.47
SLC39A1-202ENST00000356205 PREX2Q70Z35 1606 aa24.2■■□□□ 1.46
SLC39A1-202ENST00000356205 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
SLC39A1-202ENST00000356205 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms