RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
TCF4-202ENST00000356073 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
TCF4-202ENST00000356073 PTMSP20962 102 aa14.89□□□□□ -0.03
TCF4-202ENST00000356073 NAP1L2Q9ULW6 460 aaPredicted RBP14.89□□□□□ -0.03
TCF4-202ENST00000356073 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.89□□□□□ -0.03
TCF4-202ENST00000356073 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
TCF4-202ENST00000356073 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
TCF4-202ENST00000356073 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
TCF4-202ENST00000356073 FGD1P98174 961 aa14.85□□□□□ -0.03
TCF4-202ENST00000356073 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
TCF4-202ENST00000356073 PDE4CQ08493 712 aa14.85□□□□□ -0.03
TCF4-202ENST00000356073 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
TCF4-202ENST00000356073 PTMAP06454 111 aaKnown RBP14.81□□□□□ -0.04
TCF4-202ENST00000356073 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
TCF4-202ENST00000356073 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
TCF4-202ENST00000356073 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
TCF4-202ENST00000356073 DNTTIP2Q5QJE6 756 aaKnown RBP14.79□□□□□ -0.04
TCF4-202ENST00000356073 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
TCF4-202ENST00000356073 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
TCF4-202ENST00000356073 G3V3G9 751 aa14.79□□□□□ -0.04
TCF4-202ENST00000356073 DCAF8Q5TAQ9 597 aa14.79□□□□□ -0.04
TCF4-202ENST00000356073 KAT6BQ8WYB5 2073 aa14.79□□□□□ -0.04
TCF4-202ENST00000356073 EIF4G2P78344 907 aaKnown RBP eCLIP14.78□□□□□ -0.042e-7■■■■■ 31.9
TCF4-202ENST00000356073 BECN1Q14457 450 aa14.77□□□□□ -0.05
TCF4-202ENST00000356073 OS9Q13438 667 aaPredicted RBP14.76□□□□□ -0.05
TCF4-202ENST00000356073 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
TCF4-202ENST00000356073 NOC3LQ8WTT2 800 aaKnown RBP14.75□□□□□ -0.05
TCF4-202ENST00000356073 PNNQ9H307 717 aaKnown RBP14.75□□□□□ -0.05
TCF4-202ENST00000356073 PLCB2Q00722 1185 aa14.75□□□□□ -0.05
TCF4-202ENST00000356073 TMC1Q8TDI8 760 aa14.74□□□□□ -0.05
TCF4-202ENST00000356073 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
TCF4-202ENST00000356073 CASC1Q6TDU7 716 aa14.73□□□□□ -0.05
TCF4-202ENST00000356073 GOLGA6L22H0YM25 854 aa14.73□□□□□ -0.05
TCF4-202ENST00000356073 GOLGA6L6A8MZA4 724 aa14.72□□□□□ -0.05
TCF4-202ENST00000356073 KIAA2012Q0VF49 1180 aa14.72□□□□□ -0.05
TCF4-202ENST00000356073 KCNJ4P48050 445 aa14.72□□□□□ -0.05
TCF4-202ENST00000356073 NBR1Q14596 966 aa14.71□□□□□ -0.05
TCF4-202ENST00000356073 KDM2AQ9Y2K7 1162 aa14.69□□□□□ -0.06
TCF4-202ENST00000356073 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
TCF4-202ENST00000356073 FAM9BQ8IZU0 186 aa14.69□□□□□ -0.06
TCF4-202ENST00000356073 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
TCF4-202ENST00000356073 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
TCF4-202ENST00000356073 CHAF1AQ13111 956 aaPredicted RBP14.66□□□□□ -0.06
TCF4-202ENST00000356073 L1TD1Q5T7N2 865 aaKnown RBP14.66□□□□□ -0.06
TCF4-202ENST00000356073 NRDCO43847 1150 aa14.66□□□□□ -0.06
TCF4-202ENST00000356073 ZNF330Q9Y3S2 320 aaPredicted RBP14.66□□□□□ -0.06
TCF4-202ENST00000356073 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
TCF4-202ENST00000356073 GNL2Q13823 731 aaKnown RBP14.64□□□□□ -0.07
TCF4-202ENST00000356073 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
TCF4-202ENST00000356073 USP35Q9P2H5 1018 aa14.62□□□□□ -0.07
TCF4-202ENST00000356073 A0A0U1RQG5 324 aaPredicted RBP14.61□□□□□ -0.07
TCF4-202ENST00000356073 VPS53Q5VIR6 699 aa14.6□□□□□ -0.07
TCF4-202ENST00000356073 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
TCF4-202ENST00000356073 CCDC136Q96JN2 1154 aa14.59□□□□□ -0.07
TCF4-202ENST00000356073 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
TCF4-202ENST00000356073 MSH5O43196 834 aa14.58□□□□□ -0.08
TCF4-202ENST00000356073 GOLGA6L4A6NEF3 574 aa14.57□□□□□ -0.08
TCF4-202ENST00000356073 CEP89Q96ST8 783 aa14.57□□□□□ -0.08
TCF4-202ENST00000356073 SOX12O15370 315 aa14.56□□□□□ -0.08
TCF4-202ENST00000356073 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
TCF4-202ENST00000356073 NAP1L5Q96NT1 182 aaPredicted RBP14.56□□□□□ -0.08
TCF4-202ENST00000356073 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
TCF4-202ENST00000356073 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
TCF4-202ENST00000356073 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCF4-202ENST00000356073 FTSJ3Q8IY81 847 aaKnown RBP14.53□□□□□ -0.08
TCF4-202ENST00000356073 CFAP53Q96M91 514 aa14.53□□□□□ -0.08
TCF4-202ENST00000356073 POGKQ9P215 609 aa14.51□□□□□ -0.09
TCF4-202ENST00000356073 CSB-PGBD3P0DP91 1061 aa14.51□□□□□ -0.09
TCF4-202ENST00000356073 CALRP27797 417 aaKnown RBP14.51□□□□□ -0.09
TCF4-202ENST00000356073 TONSLQ96HA7 1378 aa14.5□□□□□ -0.09
TCF4-202ENST00000356073 CHIC2Q9UKJ5 165 aa14.49□□□□□ -0.09
TCF4-202ENST00000356073 MLECQ14165 292 aa14.48□□□□□ -0.09
TCF4-202ENST00000356073 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
TCF4-202ENST00000356073 CTDP1Q9Y5B0 961 aaPredicted RBP14.47□□□□□ -0.09
TCF4-202ENST00000356073 TNNT3P45378 269 aaPredicted RBP14.47□□□□□ -0.09
TCF4-202ENST00000356073 TCEAL9Q9UHQ7 104 aa14.47□□□□□ -0.09
TCF4-202ENST00000356073 DRC7Q8IY82 874 aa14.47□□□□□ -0.09
TCF4-202ENST00000356073 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
TCF4-202ENST00000356073 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
TCF4-202ENST00000356073 MYO10Q9HD67 2058 aa14.46□□□□□ -0.1
TCF4-202ENST00000356073 MARCH6O60337 910 aa14.45□□□□□ -0.1
TCF4-202ENST00000356073 MSNP26038 577 aaKnown RBP14.45□□□□□ -0.1
TCF4-202ENST00000356073 RASSF8Q8NHQ8 419 aa14.45□□□□□ -0.1
TCF4-202ENST00000356073 FRAT2O75474 233 aaPredicted RBP14.44□□□□□ -0.1
TCF4-202ENST00000356073 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
TCF4-202ENST00000356073 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
TCF4-202ENST00000356073 MEX3CQ5U5Q3 659 aaKnown RBP14.43□□□□□ -0.1
TCF4-202ENST00000356073 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
TCF4-202ENST00000356073 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
TCF4-202ENST00000356073 CREBRFQ8IUR6 639 aa14.41□□□□□ -0.1
TCF4-202ENST00000356073 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
TCF4-202ENST00000356073 GORABQ5T7V8 394 aa14.4□□□□□ -0.1
TCF4-202ENST00000356073 PAF1Q8N7H5 531 aa14.4□□□□□ -0.1
TCF4-202ENST00000356073 MYH10P35580 1976 aa14.39□□□□□ -0.11
TCF4-202ENST00000356073 RAD21O60216 631 aa14.38□□□□□ -0.11
TCF4-202ENST00000356073 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
TCF4-202ENST00000356073 SETQ01105 290 aaPredicted RBP14.38□□□□□ -0.11
TCF4-202ENST00000356073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■■■■■ 130.4
TCF4-202ENST00000356073 RSPH6AQ9H0K4 717 aa14.37□□□□□ -0.11
TCF4-202ENST00000356073 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms