RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 NESP48681 1621 aa21.33■■□□□ 1
STRN3-201ENST00000355683 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
STRN3-201ENST00000355683 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
STRN3-201ENST00000355683 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
STRN3-201ENST00000355683 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
STRN3-201ENST00000355683 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
STRN3-201ENST00000355683 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
STRN3-201ENST00000355683 CUX2O14529 1486 aa21.22■□□□□ 0.99
STRN3-201ENST00000355683 SLC4A1APQ9BWU0 796 aaKnown RBP21.22■□□□□ 0.99
STRN3-201ENST00000355683 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
STRN3-201ENST00000355683 FOXD1Q16676 465 aa21.2■□□□□ 0.98
STRN3-201ENST00000355683 SUPT16HQ9Y5B9 1047 aaKnown RBP21.17■□□□□ 0.98
STRN3-201ENST00000355683 KDM2AQ9Y2K7 1162 aa21.16■□□□□ 0.98
STRN3-201ENST00000355683 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
STRN3-201ENST00000355683 CFTRP13569 1480 aa21.12■□□□□ 0.97
STRN3-201ENST00000355683 BCL11AQ9H165 835 aa21.09■□□□□ 0.97
STRN3-201ENST00000355683 MTUS2Q5JR59 1369 aa21.07■□□□□ 0.96
STRN3-201ENST00000355683 NPM2Q86SE8 214 aaKnown RBP21.07■□□□□ 0.96
STRN3-201ENST00000355683 EEA1Q15075 1411 aa21.06■□□□□ 0.96
STRN3-201ENST00000355683 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
STRN3-201ENST00000355683 CDK11AQ9UQ88 783 aaPredicted RBP21.03■□□□□ 0.96
STRN3-201ENST00000355683 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
STRN3-201ENST00000355683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.966e-13■□□□□ 9.9
STRN3-201ENST00000355683 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
STRN3-201ENST00000355683 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.95
STRN3-201ENST00000355683 MRS2Q9HD23 443 aa21.02■□□□□ 0.95
STRN3-201ENST00000355683 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.95
STRN3-201ENST00000355683 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
STRN3-201ENST00000355683 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
STRN3-201ENST00000355683 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
STRN3-201ENST00000355683 NBR1Q14596 966 aa20.94■□□□□ 0.94
STRN3-201ENST00000355683 RGL3Q3MIN7 710 aa20.93■□□□□ 0.94
STRN3-201ENST00000355683 RAB3GAP2Q9H2M9 1393 aa20.93■□□□□ 0.94
STRN3-201ENST00000355683 ANP32EQ9BTT0 268 aa20.92■□□□□ 0.94
STRN3-201ENST00000355683 DHX57Q6P158 1386 aaKnown RBP20.86■□□□□ 0.93
STRN3-201ENST00000355683 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
STRN3-201ENST00000355683 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
STRN3-201ENST00000355683 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.922e-7■■■■□ 26.1
STRN3-201ENST00000355683 TSHZ2Q9NRE2 1034 aa20.82■□□□□ 0.92
STRN3-201ENST00000355683 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
STRN3-201ENST00000355683 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.923e-6■■■■□ 25.5
STRN3-201ENST00000355683 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
STRN3-201ENST00000355683 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
STRN3-201ENST00000355683 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
STRN3-201ENST00000355683 CUX1P39880 1505 aa20.78■□□□□ 0.92
STRN3-201ENST00000355683 NPM1P06748 294 aaKnown RBP eCLIP20.78■□□□□ 0.92
STRN3-201ENST00000355683 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
STRN3-201ENST00000355683 FHOD3Q2V2M9 1422 aa20.76■□□□□ 0.91
STRN3-201ENST00000355683 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
STRN3-201ENST00000355683 IGF1RP08069 1367 aa20.73■□□□□ 0.91
STRN3-201ENST00000355683 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
STRN3-201ENST00000355683 CHGAP10645 457 aaKnown RBP20.72■□□□□ 0.91
STRN3-201ENST00000355683 HSPA5P11021 654 aaKnown RBP20.72■□□□□ 0.91
STRN3-201ENST00000355683 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
STRN3-201ENST00000355683 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
STRN3-201ENST00000355683 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
STRN3-201ENST00000355683 RBM19Q9Y4C8 960 aaKnown RBP20.66■□□□□ 0.9
STRN3-201ENST00000355683 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
STRN3-201ENST00000355683 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
STRN3-201ENST00000355683 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
STRN3-201ENST00000355683 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
STRN3-201ENST00000355683 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
STRN3-201ENST00000355683 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
STRN3-201ENST00000355683 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.89
STRN3-201ENST00000355683 ANP32AP39687 249 aaKnown RBP20.57■□□□□ 0.88
STRN3-201ENST00000355683 TSPY4P0CV99 314 aa20.57■□□□□ 0.88
STRN3-201ENST00000355683 TSPY10P0CW01 314 aa20.57■□□□□ 0.88
STRN3-201ENST00000355683 ARXQ96QS3 562 aa20.57■□□□□ 0.88
STRN3-201ENST00000355683 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
STRN3-201ENST00000355683 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
STRN3-201ENST00000355683 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
STRN3-201ENST00000355683 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
STRN3-201ENST00000355683 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
STRN3-201ENST00000355683 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
STRN3-201ENST00000355683 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
STRN3-201ENST00000355683 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
STRN3-201ENST00000355683 KIF21BO75037 1637 aa20.52■□□□□ 0.88
STRN3-201ENST00000355683 ZNF644Q9H582 1327 aaPredicted RBP20.52■□□□□ 0.87
STRN3-201ENST00000355683 DCAF11Q8TEB1 546 aa20.52■□□□□ 0.87
STRN3-201ENST00000355683 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
STRN3-201ENST00000355683 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
STRN3-201ENST00000355683 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
STRN3-201ENST00000355683 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
STRN3-201ENST00000355683 CCDC184Q52MB2 194 aa20.48■□□□□ 0.87
STRN3-201ENST00000355683 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
STRN3-201ENST00000355683 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
STRN3-201ENST00000355683 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
STRN3-201ENST00000355683 PKD2Q13563 968 aa20.45■□□□□ 0.86
STRN3-201ENST00000355683 LAS1LQ9Y4W2 734 aaKnown RBP20.43■□□□□ 0.86
STRN3-201ENST00000355683 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
STRN3-201ENST00000355683 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
STRN3-201ENST00000355683 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
STRN3-201ENST00000355683 SNAPC4Q5SXM2 1469 aa20.41■□□□□ 0.86
STRN3-201ENST00000355683 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
STRN3-201ENST00000355683 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.86
STRN3-201ENST00000355683 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
STRN3-201ENST00000355683 ZBTB47Q9UFB7 747 aaPredicted RBP20.36■□□□□ 0.85
STRN3-201ENST00000355683 HNRNPMP52272 730 aaKnown RBP eCLIP20.34■□□□□ 0.854e-7■■■■■ 29.8
STRN3-201ENST00000355683 PLEKHG5O94827 1062 aa20.33■□□□□ 0.85
STRN3-201ENST00000355683 SLC24A1O60721 1099 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms