RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
PGBD2-202ENST00000355360 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
PGBD2-202ENST00000355360 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.88
PGBD2-202ENST00000355360 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
PGBD2-202ENST00000355360 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
PGBD2-202ENST00000355360 PCF11O94913 1555 aaKnown RBP20.54■□□□□ 0.88
PGBD2-202ENST00000355360 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
PGBD2-202ENST00000355360 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
PGBD2-202ENST00000355360 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
PGBD2-202ENST00000355360 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
PGBD2-202ENST00000355360 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
PGBD2-202ENST00000355360 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
PGBD2-202ENST00000355360 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
PGBD2-202ENST00000355360 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
PGBD2-202ENST00000355360 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
PGBD2-202ENST00000355360 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
PGBD2-202ENST00000355360 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
PGBD2-202ENST00000355360 CFAP43Q8NDM7 1665 aa20.38■□□□□ 0.85
PGBD2-202ENST00000355360 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
PGBD2-202ENST00000355360 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
PGBD2-202ENST00000355360 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
PGBD2-202ENST00000355360 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
PGBD2-202ENST00000355360 PELP1Q8IZL8 1130 aaKnown RBP20.31■□□□□ 0.84
PGBD2-202ENST00000355360 CASKIN1Q8WXD9 1431 aa20.3■□□□□ 0.84
PGBD2-202ENST00000355360 CUL7Q14999 1698 aa20.3■□□□□ 0.84
PGBD2-202ENST00000355360 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
PGBD2-202ENST00000355360 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
PGBD2-202ENST00000355360 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
PGBD2-202ENST00000355360 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
PGBD2-202ENST00000355360 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
PGBD2-202ENST00000355360 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
PGBD2-202ENST00000355360 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
PGBD2-202ENST00000355360 LRRIQ1Q96JM4 1722 aa20.26■□□□□ 0.83
PGBD2-202ENST00000355360 EFCAB5A4FU69 1503 aa20.26■□□□□ 0.83
PGBD2-202ENST00000355360 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
PGBD2-202ENST00000355360 PTPRKQ15262 1439 aa20.23■□□□□ 0.83
PGBD2-202ENST00000355360 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
PGBD2-202ENST00000355360 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
PGBD2-202ENST00000355360 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
PGBD2-202ENST00000355360 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
PGBD2-202ENST00000355360 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
PGBD2-202ENST00000355360 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.825e-7■■■■■ 28.2
PGBD2-202ENST00000355360 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
PGBD2-202ENST00000355360 NCOA2Q15596 1464 aa20.14■□□□□ 0.81
PGBD2-202ENST00000355360 SAMD9Q5K651 1589 aa20.13■□□□□ 0.81
PGBD2-202ENST00000355360 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
PGBD2-202ENST00000355360 MAGI3Q5TCQ9 1506 aa20.11■□□□□ 0.81
PGBD2-202ENST00000355360 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
PGBD2-202ENST00000355360 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
PGBD2-202ENST00000355360 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
PGBD2-202ENST00000355360 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
PGBD2-202ENST00000355360 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
PGBD2-202ENST00000355360 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
PGBD2-202ENST00000355360 CDK13Q14004 1512 aaKnown RBP20.04■□□□□ 0.8
PGBD2-202ENST00000355360 PTPN23Q9H3S7 1636 aa20.04■□□□□ 0.8
PGBD2-202ENST00000355360 NAIPQ13075 1403 aa20.04■□□□□ 0.8
PGBD2-202ENST00000355360 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
PGBD2-202ENST00000355360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.8
PGBD2-202ENST00000355360 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
PGBD2-202ENST00000355360 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
PGBD2-202ENST00000355360 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
PGBD2-202ENST00000355360 FOXD1Q16676 465 aa20.01■□□□□ 0.79
PGBD2-202ENST00000355360 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
PGBD2-202ENST00000355360 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
PGBD2-202ENST00000355360 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
PGBD2-202ENST00000355360 BCANQ96GW7 911 aa19.97■□□□□ 0.79
PGBD2-202ENST00000355360 UGGT2Q9NYU1 1516 aa19.97■□□□□ 0.79
PGBD2-202ENST00000355360 KDM6BO15054 1643 aa19.96■□□□□ 0.79
PGBD2-202ENST00000355360 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
PGBD2-202ENST00000355360 EPRSP07814 1512 aaKnown RBP19.94■□□□□ 0.78
PGBD2-202ENST00000355360 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
PGBD2-202ENST00000355360 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
PGBD2-202ENST00000355360 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
PGBD2-202ENST00000355360 TIMELESSQ9UNS1 1208 aa19.91■□□□□ 0.78
PGBD2-202ENST00000355360 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
PGBD2-202ENST00000355360 FBLN2P98095 1184 aa19.89■□□□□ 0.77
PGBD2-202ENST00000355360 HECW1Q76N89 1606 aa19.89■□□□□ 0.77
PGBD2-202ENST00000355360 DENND4BO75064 1496 aaPredicted RBP19.88■□□□□ 0.77
PGBD2-202ENST00000355360 ARHGEF11O15085 1522 aa19.88■□□□□ 0.77
PGBD2-202ENST00000355360 ANP32CO43423 234 aa19.87■□□□□ 0.77
PGBD2-202ENST00000355360 WDR62O43379 1518 aa19.84■□□□□ 0.77
PGBD2-202ENST00000355360 KDM5BQ9UGL1 1544 aa19.84■□□□□ 0.77
PGBD2-202ENST00000355360 MPHOSPH9Q99550 1183 aa19.82■□□□□ 0.76
PGBD2-202ENST00000355360 FKBP8Q14318 412 aa19.81■□□□□ 0.76
PGBD2-202ENST00000355360 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
PGBD2-202ENST00000355360 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
PGBD2-202ENST00000355360 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
PGBD2-202ENST00000355360 DISP1Q96F81 1524 aa19.78■□□□□ 0.76
PGBD2-202ENST00000355360 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
PGBD2-202ENST00000355360 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
PGBD2-202ENST00000355360 NUP153P49790 1475 aaKnown RBP19.76■□□□□ 0.75
PGBD2-202ENST00000355360 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
PGBD2-202ENST00000355360 KIAA0556O60303 1618 aa19.74■□□□□ 0.75
PGBD2-202ENST00000355360 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
PGBD2-202ENST00000355360 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
PGBD2-202ENST00000355360 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
PGBD2-202ENST00000355360 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
PGBD2-202ENST00000355360 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
PGBD2-202ENST00000355360 C11orf95C9JLR9 678 aaPredicted RBP19.73■□□□□ 0.75
PGBD2-202ENST00000355360 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms