RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 CEP162Q5TB80 1403 aa32.26■■■□□ 2.75
SIGMAR1-202ENST00000353468 NUP160Q12769 1436 aa32.24■■■□□ 2.75
SIGMAR1-202ENST00000353468 CEP170Q5SW79 1584 aa32.23■■■□□ 2.75
SIGMAR1-202ENST00000353468 RANGAP1P46060 587 aaPredicted RBP32.22■■■□□ 2.75
SIGMAR1-202ENST00000353468 KIAA0586Q9BVV6 1533 aa32.2■■■□□ 2.74
SIGMAR1-202ENST00000353468 CLIP1P30622 1438 aa32.17■■■□□ 2.74
SIGMAR1-202ENST00000353468 IQGAP2Q13576 1575 aa32.14■■■□□ 2.74
SIGMAR1-202ENST00000353468 ARHGAP35Q9NRY4 1499 aa32.02■■■□□ 2.72
SIGMAR1-202ENST00000353468 JPH4Q96JJ6 628 aa32.01■■■□□ 2.71
SIGMAR1-202ENST00000353468 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
SIGMAR1-202ENST00000353468 OSCARQ8IYS5 282 aa31.98■■■□□ 2.71
SIGMAR1-202ENST00000353468 EFCAB5A4FU69 1503 aa31.97■■■□□ 2.71
SIGMAR1-202ENST00000353468 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
SIGMAR1-202ENST00000353468 P3H3Q8IVL6 736 aa31.94■■■□□ 2.7
SIGMAR1-202ENST00000353468 SAMD9Q5K651 1589 aa31.93■■■□□ 2.7
SIGMAR1-202ENST00000353468 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
SIGMAR1-202ENST00000353468 DISP1Q96F81 1524 aa31.86■■■□□ 2.69
SIGMAR1-202ENST00000353468 FHOD3Q2V2M9 1422 aa31.86■■■□□ 2.69
SIGMAR1-202ENST00000353468 SHROOM2Q13796 1616 aa31.85■■■□□ 2.69
SIGMAR1-202ENST00000353468 CARMIL2Q6F5E8 1435 aa31.83■■■□□ 2.69
SIGMAR1-202ENST00000353468 KIAA0556O60303 1618 aa31.82■■■□□ 2.68
SIGMAR1-202ENST00000353468 PRG4Q92954 1404 aaPredicted RBP31.82■■■□□ 2.68
SIGMAR1-202ENST00000353468 VPS8Q8N3P4 1428 aa31.79■■■□□ 2.68
SIGMAR1-202ENST00000353468 FMN1Q68DA7 1419 aa31.7■■■□□ 2.67
SIGMAR1-202ENST00000353468 ERCC6L2Q5T890 1561 aa31.65■■■□□ 2.66
SIGMAR1-202ENST00000353468 TTBK1Q5TCY1 1321 aaPredicted RBP31.64■■■□□ 2.66
SIGMAR1-202ENST00000353468 PTPRGP23470 1445 aa31.57■■■□□ 2.64
SIGMAR1-202ENST00000353468 CASKIN1Q8WXD9 1431 aa31.57■■■□□ 2.64
SIGMAR1-202ENST00000353468 PCF11O94913 1555 aaKnown RBP31.55■■■□□ 2.64
SIGMAR1-202ENST00000353468 ATP1B4Q9UN42 357 aaPredicted RBP31.53■■■□□ 2.64
SIGMAR1-202ENST00000353468 FYCO1Q9BQS8 1478 aa31.52■■■□□ 2.64
SIGMAR1-202ENST00000353468 APLP2Q06481 763 aa31.5■■■□□ 2.63
SIGMAR1-202ENST00000353468 PLB1Q6P1J6 1458 aa31.45■■■□□ 2.63
SIGMAR1-202ENST00000353468 RAPGEF6Q8TEU7 1601 aa31.45■■■□□ 2.62
SIGMAR1-202ENST00000353468 ABCA8O94911 1581 aa31.42■■■□□ 2.62
SIGMAR1-202ENST00000353468 HECW1Q76N89 1606 aa31.41■■■□□ 2.62
SIGMAR1-202ENST00000353468 ARHGEF11O15085 1522 aa31.4■■■□□ 2.62
SIGMAR1-202ENST00000353468 UACAQ9BZF9 1416 aa31.38■■■□□ 2.61
SIGMAR1-202ENST00000353468 MAP3K1Q13233 1512 aa31.36■■■□□ 2.61
SIGMAR1-202ENST00000353468 NUP153P49790 1475 aaKnown RBP31.35■■■□□ 2.61
SIGMAR1-202ENST00000353468 PPARGC1BQ86YN6 1023 aaKnown RBP31.34■■■□□ 2.61
SIGMAR1-202ENST00000353468 LRRIQ1Q96JM4 1722 aa31.32■■■□□ 2.6
SIGMAR1-202ENST00000353468 TIAM1Q13009 1591 aa31.32■■■□□ 2.6
SIGMAR1-202ENST00000353468 EPRSP07814 1512 aaKnown RBP31.32■■■□□ 2.6
SIGMAR1-202ENST00000353468 CCDC18Q5T9S5 1454 aa31.31■■■□□ 2.6
SIGMAR1-202ENST00000353468 ARID3CA6NKF2 412 aa31.3■■■□□ 2.6
SIGMAR1-202ENST00000353468 RIMBP3CA6NJZ7 1639 aa31.29■■■□□ 2.6
SIGMAR1-202ENST00000353468 RIMBP3BA6NNM3 1639 aa31.29■■■□□ 2.6
SIGMAR1-202ENST00000353468 RIMBP3Q9UFD9 1639 aa31.29■■■□□ 2.6
SIGMAR1-202ENST00000353468 CFAP43Q8NDM7 1665 aa31.27■■■□□ 2.6
SIGMAR1-202ENST00000353468 ABCC2Q92887 1545 aa31.27■■■□□ 2.6
SIGMAR1-202ENST00000353468 KANK4Q5T7N3 995 aaPredicted RBP31.26■■■□□ 2.6
SIGMAR1-202ENST00000353468 UHRF1BP1LA0JNW5 1464 aa31.26■■■□□ 2.59
SIGMAR1-202ENST00000353468 CDK13Q14004 1512 aaKnown RBP31.25■■■□□ 2.59
SIGMAR1-202ENST00000353468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.22■■■□□ 2.59
SIGMAR1-202ENST00000353468 HNRNPUL2Q1KMD3 747 aaKnown RBP31.22■■■□□ 2.59
SIGMAR1-202ENST00000353468 ATP10BO94823 1461 aa31.21■■■□□ 2.59
SIGMAR1-202ENST00000353468 LRRC9Q6ZRR7 1453 aa31.2■■■□□ 2.58
SIGMAR1-202ENST00000353468 ADCY10Q96PN6 1610 aa31.15■■■□□ 2.58
SIGMAR1-202ENST00000353468 CYB5RLQ6IPT4 315 aa31.15■■■□□ 2.58
SIGMAR1-202ENST00000353468 CDK11AQ9UQ88 783 aaPredicted RBP31.15■■■□□ 2.58
SIGMAR1-202ENST00000353468 MTUS2Q5JR59 1369 aa31.14■■■□□ 2.58
SIGMAR1-202ENST00000353468 KDM5BQ9UGL1 1544 aa31.11■■■□□ 2.57
SIGMAR1-202ENST00000353468 MAGI3Q5TCQ9 1506 aa31.09■■■□□ 2.57
SIGMAR1-202ENST00000353468 EHBP1L1Q8N3D4 1523 aa31.07■■■□□ 2.56
SIGMAR1-202ENST00000353468 PLEKHD1A6NEE1 506 aa31.06■■■□□ 2.56
SIGMAR1-202ENST00000353468 ZCCHC11Q5TAX3 1644 aaKnown RBP31.05■■■□□ 2.56
SIGMAR1-202ENST00000353468 TROQ12816 1431 aaPredicted RBP31.02■■■□□ 2.56
SIGMAR1-202ENST00000353468 NPM1P06748 294 aaKnown RBP eCLIP31.01■■■□□ 2.56
SIGMAR1-202ENST00000353468 DNAJC5Q9H3Z4 198 aa30.96■■■□□ 2.55
SIGMAR1-202ENST00000353468 SUPT6HQ7KZ85 1726 aaKnown RBP30.95■■■□□ 2.55
SIGMAR1-202ENST00000353468 NCOA2Q15596 1464 aa30.93■■■□□ 2.54
SIGMAR1-202ENST00000353468 TRIM26Q12899 539 aaPredicted RBP30.9■■■□□ 2.54
SIGMAR1-202ENST00000353468 PHLDB1Q86UU1 1377 aa30.88■■■□□ 2.53
SIGMAR1-202ENST00000353468 ASXL2Q76L83 1435 aa30.85■■■□□ 2.53
SIGMAR1-202ENST00000353468 KIF14Q15058 1648 aa30.84■■■□□ 2.53
SIGMAR1-202ENST00000353468 WDR7Q9Y4E6 1490 aa30.83■■■□□ 2.53
SIGMAR1-202ENST00000353468 KCNH8Q96L42 1107 aa30.83■■■□□ 2.53
SIGMAR1-202ENST00000353468 CCNB3Q8WWL7 1395 aa30.77■■■□□ 2.52
SIGMAR1-202ENST00000353468 MYOM3Q5VTT5 1437 aa30.77■■■□□ 2.52
SIGMAR1-202ENST00000353468 ABCC10Q5T3U5 1492 aa30.77■■■□□ 2.52
SIGMAR1-202ENST00000353468 MAPKBP1O60336 1514 aa30.75■■■□□ 2.51
SIGMAR1-202ENST00000353468 RRBP1Q9P2E9 1410 aaKnown RBP30.75■■■□□ 2.51
SIGMAR1-202ENST00000353468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.71■■■□□ 2.51
SIGMAR1-202ENST00000353468 FGD6Q6ZV73 1430 aa30.7■■■□□ 2.51
SIGMAR1-202ENST00000353468 GPATCH8Q9UKJ3 1502 aaKnown RBP30.69■■■□□ 2.5
SIGMAR1-202ENST00000353468 PCGF6Q9BYE7 350 aa30.69■■■□□ 2.5
SIGMAR1-202ENST00000353468 MIA2Q96PC5 1412 aa30.66■■■□□ 2.5
SIGMAR1-202ENST00000353468 TTC37Q6PGP7 1564 aa30.66■■■□□ 2.5
SIGMAR1-202ENST00000353468 ITSN2Q9NZM3 1697 aa30.64■■■□□ 2.5
SIGMAR1-202ENST00000353468 CFDP1Q9UEE9 299 aaPredicted RBP30.63■■■□□ 2.49
SIGMAR1-202ENST00000353468 CDC42BPAQ5VT25 1732 aa30.63■■■□□ 2.49
SIGMAR1-202ENST00000353468 FAM50AQ14320 339 aaKnown RBP30.62■■■□□ 2.49
SIGMAR1-202ENST00000353468 ABCA9Q8IUA7 1624 aa30.6■■■□□ 2.49
SIGMAR1-202ENST00000353468 PTPN23Q9H3S7 1636 aa30.58■■■□□ 2.49
SIGMAR1-202ENST00000353468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.58■■■□□ 2.49
SIGMAR1-202ENST00000353468 MYO5CQ9NQX4 1742 aa30.56■■■□□ 2.48
SIGMAR1-202ENST00000353468 PLCH2O75038 1416 aa30.56■■■□□ 2.48
SIGMAR1-202ENST00000353468 PREX2Q70Z35 1606 aa30.56■■■□□ 2.48
SIGMAR1-202ENST00000353468 TCOF1Q13428 1488 aaKnown RBP30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms